RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 GGA1Q9UJY5 639 aa6.65□□□□□ -1.35
BRCA1-204ENST00000412061 RNF225M0QZC1 329 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-204ENST00000412061 PTPRAP18433 802 aa6.64□□□□□ -1.35
BRCA1-204ENST00000412061 SRSF11Q05519 484 aaKnown RBP6.64□□□□□ -1.35
BRCA1-204ENST00000412061 SF3A1Q15459 793 aaKnown RBP6.64□□□□□ -1.35
BRCA1-204ENST00000412061 CCDC85BQ15834 202 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-204ENST00000412061 RPS26P11Q5JNZ5 115 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-204ENST00000412061 SLCO4C1Q6ZQN7 724 aa6.64□□□□□ -1.35
BRCA1-204ENST00000412061 SV2BQ7L1I2 683 aa6.64□□□□□ -1.35
BRCA1-204ENST00000412061 USP48Q86UV5 1035 aa6.64□□□□□ -1.35
BRCA1-204ENST00000412061 SVOPQ8N4V2 548 aa6.64□□□□□ -1.35
BRCA1-204ENST00000412061 BSNDQ8WZ55 320 aa6.64□□□□□ -1.35
BRCA1-204ENST00000412061 POP1Q99575 1024 aaKnown RBP6.64□□□□□ -1.35
BRCA1-204ENST00000412061 CEP44Q9C0F1 390 aa6.64□□□□□ -1.35
BRCA1-204ENST00000412061 SMG9Q9H0W8 520 aaKnown RBP6.64□□□□□ -1.35
BRCA1-204ENST00000412061 NAGPAQ9UK23 515 aa6.64□□□□□ -1.35
BRCA1-204ENST00000412061 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-204ENST00000412061 CADPSQ9ULU8 1353 aa6.64□□□□□ -1.35
BRCA1-204ENST00000412061 FAM177BA6PVY3 158 aa6.63□□□□□ -1.35
BRCA1-204ENST00000412061 ARHGEF15O94989 841 aa6.63□□□□□ -1.35
BRCA1-204ENST00000412061 ZNF394Q53GI3 561 aa6.63□□□□□ -1.35
BRCA1-204ENST00000412061 PSAPL1Q6NUJ1 521 aa6.63□□□□□ -1.35
BRCA1-204ENST00000412061 TPTE2Q6XPS3 522 aa6.63□□□□□ -1.35
BRCA1-204ENST00000412061 ERMP1Q7Z2K6 904 aa6.63□□□□□ -1.35
BRCA1-204ENST00000412061 ZNF654Q8IZM8 581 aa6.63□□□□□ -1.35
BRCA1-204ENST00000412061 TTC9Q92623 222 aa6.63□□□□□ -1.35
BRCA1-204ENST00000412061 LPIN3Q9BQK8 851 aa6.63□□□□□ -1.35
BRCA1-204ENST00000412061 ZNF576Q9H609 170 aa6.63□□□□□ -1.35
BRCA1-204ENST00000412061 DDX41Q9UJV9 622 aaKnown RBP6.63□□□□□ -1.35
BRCA1-204ENST00000412061 FBXO24O75426 580 aa6.62□□□□□ -1.35
BRCA1-204ENST00000412061 SLURP2P0DP57 97 aa6.62□□□□□ -1.35
BRCA1-204ENST00000412061 RLBP1P12271 317 aa6.62□□□□□ -1.35
BRCA1-204ENST00000412061 PWP1Q13610 501 aa6.62□□□□□ -1.35
BRCA1-204ENST00000412061 GPAT2Q6NUI2 795 aa6.62□□□□□ -1.35
BRCA1-204ENST00000412061 CACTIN-AS1Q8N1I8 211 aa6.62□□□□□ -1.35
BRCA1-204ENST00000412061 RSRP1Q9BUV0 290 aa6.62□□□□□ -1.35
BRCA1-204ENST00000412061 MUC3BQ9H195 1237 aa6.62□□□□□ -1.35
BRCA1-204ENST00000412061 CLEC4MQ9H2X3 399 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-204ENST00000412061 PCDHGB7Q9Y5F8 929 aa6.62□□□□□ -1.35
BRCA1-204ENST00000412061 RGS9O75916 674 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-204ENST00000412061 RACK1P63244 317 aaKnown RBP6.61□□□□□ -1.35
BRCA1-204ENST00000412061 RELL1Q8IUW5 271 aa6.61□□□□□ -1.35
BRCA1-204ENST00000412061 NECAB3Q96P71 396 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-204ENST00000412061 LACRTQ9GZZ8 138 aa6.61□□□□□ -1.35
BRCA1-204ENST00000412061 ADAM19Q9H013 955 aa6.61□□□□□ -1.35
BRCA1-204ENST00000412061 ACBD3Q9H3P7 528 aa6.61□□□□□ -1.35
BRCA1-204ENST00000412061 SRA1Q9HD15 236 aaKnown RBP6.61□□□□□ -1.35
BRCA1-204ENST00000412061 SEC31BQ9NQW1 1179 aa6.61□□□□□ -1.35
BRCA1-204ENST00000412061 GPN3Q9UHW5 284 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-204ENST00000412061 SOX13Q9UN79 622 aa6.61□□□□□ -1.35
BRCA1-204ENST00000412061 TRIM33Q9UPN9 1127 aa6.61□□□□□ -1.35
BRCA1-204ENST00000412061 ADAMTS2O95450 1211 aa6.6□□□□□ -1.35
BRCA1-204ENST00000412061 EPXP11678 715 aa6.6□□□□□ -1.35
BRCA1-204ENST00000412061 NCLP19338 710 aaKnown RBP6.6□□□□□ -1.35
BRCA1-204ENST00000412061 MAP3K10Q02779 954 aa6.6□□□□□ -1.35
BRCA1-204ENST00000412061 GNL2Q13823 731 aaKnown RBP6.6□□□□□ -1.35
BRCA1-204ENST00000412061 ACDQ96AP0 544 aa6.6□□□□□ -1.35
BRCA1-204ENST00000412061 POLR3GLQ9BT43 218 aa6.6□□□□□ -1.35
BRCA1-204ENST00000412061 CAPN10Q9HC96 672 aa6.6□□□□□ -1.35
BRCA1-204ENST00000412061 COPRSQ9NQ92 184 aa6.6□□□□□ -1.35
BRCA1-204ENST00000412061 KBTBD4Q9NVX7 518 aa6.6□□□□□ -1.35
BRCA1-204ENST00000412061 CDC27P30260 824 aa6.59□□□□□ -1.35
BRCA1-204ENST00000412061 CABP4P57796 275 aa6.59□□□□□ -1.35
BRCA1-204ENST00000412061 PPP2R3AQ06190 1150 aa6.59□□□□□ -1.35
BRCA1-204ENST00000412061 PCDH1Q08174 1060 aa6.59□□□□□ -1.35
BRCA1-204ENST00000412061 FAAP100Q0VG06 881 aa6.59□□□□□ -1.35
BRCA1-204ENST00000412061 GDF6Q6KF10 455 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-204ENST00000412061 KANK3Q6NY19 840 aa6.59□□□□□ -1.35
BRCA1-204ENST00000412061 NUDT8Q8WV74 236 aa6.59□□□□□ -1.35
BRCA1-204ENST00000412061 TRIM56Q9BRZ2 755 aaKnown RBP6.59□□□□□ -1.35
BRCA1-204ENST00000412061 TINF2Q9BSI4 451 aa6.59□□□□□ -1.35
BRCA1-204ENST00000412061 JPH1Q9HDC5 661 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-204ENST00000412061 TMEM39AQ9NV64 488 aa6.59□□□□□ -1.35
BRCA1-204ENST00000412061 ENC1O14682 589 aa6.58□□□□□ -1.36
BRCA1-204ENST00000412061 CELA3AP09093 270 aa6.58□□□□□ -1.36
BRCA1-204ENST00000412061 GBP2P32456 591 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-204ENST00000412061 MAP3K11Q16584 847 aa6.58□□□□□ -1.36
BRCA1-204ENST00000412061 ADAMTSL4Q6UY14 1074 aa6.58□□□□□ -1.36
BRCA1-204ENST00000412061 VN1R5Q7Z5H4 357 aa6.58□□□□□ -1.36
BRCA1-204ENST00000412061 ANKRD13AQ8IZ07 590 aa6.58□□□□□ -1.36
BRCA1-204ENST00000412061 SLC43A3Q8NBI5 491 aa6.58□□□□□ -1.36
BRCA1-204ENST00000412061 EDARADDQ8WWZ3 215 aa6.58□□□□□ -1.36
BRCA1-204ENST00000412061 TMEM74Q96NL1 305 aa6.58□□□□□ -1.36
BRCA1-204ENST00000412061 INPP5FQ9Y2H2 1132 aa6.58□□□□□ -1.36
BRCA1-204ENST00000412061 STARD13Q9Y3M8 1113 aa6.58□□□□□ -1.36
BRCA1-204ENST00000412061 SAMM50Q9Y512 469 aa6.58□□□□□ -1.36
BRCA1-204ENST00000412061 ANKRD62A6NC57 917 aa6.57□□□□□ -1.36
BRCA1-204ENST00000412061 B3GALT4O96024 378 aa6.57□□□□□ -1.36
BRCA1-204ENST00000412061 ALBP02768 609 aa6.57□□□□□ -1.36
BRCA1-204ENST00000412061 TNNI2P48788 182 aa6.57□□□□□ -1.36
BRCA1-204ENST00000412061 LIG3P49916 1009 aa6.57□□□□□ -1.36
BRCA1-204ENST00000412061 GIMAP6Q6P9H5 292 aa6.57□□□□□ -1.36
BRCA1-204ENST00000412061 LYPD4Q6UWN0 246 aa6.57□□□□□ -1.36
BRCA1-204ENST00000412061 C20orf204Q6ZNR8 217 aa6.57□□□□□ -1.36
BRCA1-204ENST00000412061 GALNT6Q8NCL4 622 aa6.57□□□□□ -1.36
BRCA1-204ENST00000412061 DDX54Q8TDD1 881 aaKnown RBP6.57□□□□□ -1.36
BRCA1-204ENST00000412061 SH2B1Q9NRF2 756 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-204ENST00000412061 MINDY4BA8MYZ0 360 aa6.56□□□□□ -1.36
BRCA1-204ENST00000412061 H3BRJ5 948 aa6.56□□□□□ -1.36
BRCA1-204ENST00000412061 OIP5O43482 229 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms