RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 CHD4Q14839 1912 aa17.7■□□□□ 0.42
CBX3-202ENST00000396386 TAF1P21675 1872 aa17.7■□□□□ 0.42
CBX3-202ENST00000396386 PDE6AP16499 860 aa17.7■□□□□ 0.42
CBX3-202ENST00000396386 EXOSC10Q01780 885 aaKnown RBP17.7■□□□□ 0.42
CBX3-202ENST00000396386 SPATA5Q8NB90 893 aa17.7■□□□□ 0.42
CBX3-202ENST00000396386 LRRC2Q9BYS8 371 aa17.7■□□□□ 0.42
CBX3-202ENST00000396386 AGXT2Q9BYV1 514 aa17.7■□□□□ 0.42
CBX3-202ENST00000396386 RBM27Q9P2N5 1060 aaKnown RBP17.7■□□□□ 0.42
CBX3-202ENST00000396386 NARFQ9UHQ1 456 aa17.7■□□□□ 0.42
CBX3-202ENST00000396386 CCNL1Q9UK58 526 aaPredicted RBP17.7■□□□□ 0.42
CBX3-202ENST00000396386 CNPY2Q9Y2B0 182 aa17.7■□□□□ 0.42
CBX3-202ENST00000396386 CSPP1Q1MSJ5 1256 aa17.69■□□□□ 0.42
CBX3-202ENST00000396386 USP48Q86UV5 1035 aa17.69■□□□□ 0.42
CBX3-202ENST00000396386 SYAP1Q96A49 352 aaPredicted RBP17.69■□□□□ 0.42
CBX3-202ENST00000396386 GDPD2Q9HCC8 539 aa17.69■□□□□ 0.42
CBX3-202ENST00000396386 MYH15Q9Y2K3 1946 aa17.69■□□□□ 0.42
CBX3-202ENST00000396386 GNPATO15228 680 aa17.69■□□□□ 0.42
CBX3-202ENST00000396386 PFKFB2O60825 505 aa17.69■□□□□ 0.42
CBX3-202ENST00000396386 DTNBO60941 627 aa17.69■□□□□ 0.42
CBX3-202ENST00000396386 CHRNDQ07001 517 aa17.69■□□□□ 0.42
CBX3-202ENST00000396386 RASGRF1Q13972 1273 aa17.69■□□□□ 0.42
CBX3-202ENST00000396386 SF3B3Q15393 1217 aaKnown RBP17.69■□□□□ 0.42
CBX3-202ENST00000396386 TBC1D9BQ66K14 1250 aa17.69■□□□□ 0.42
CBX3-202ENST00000396386 NYXQ9GZU5 481 aa17.69■□□□□ 0.42
CBX3-202ENST00000396386 BCL2L12Q9HB09 334 aa17.69■□□□□ 0.42
CBX3-202ENST00000396386 ZNF532Q9HCE3 1301 aa17.69■□□□□ 0.42
CBX3-202ENST00000396386 TMEM63CQ9P1W3 806 aa17.69■□□□□ 0.42
CBX3-202ENST00000396386 FGAP02671 866 aa17.68■□□□□ 0.42
CBX3-202ENST00000396386 ANKRD18AQ8IVF6 992 aa17.68■□□□□ 0.42
CBX3-202ENST00000396386 GJD4Q96KN9 370 aaPredicted RBP17.68■□□□□ 0.42
CBX3-202ENST00000396386 PANK2Q9BZ23 570 aa17.68■□□□□ 0.42
CBX3-202ENST00000396386 WWC3Q9ULE0 1092 aa17.68■□□□□ 0.42
CBX3-202ENST00000396386 NSFL1CQ9UNZ2 370 aaKnown RBP17.68■□□□□ 0.42
CBX3-202ENST00000396386 MYH13Q9UKX3 1938 aa17.68■□□□□ 0.42
CBX3-202ENST00000396386 TIAM2Q8IVF5 1701 aa17.68■□□□□ 0.42
CBX3-202ENST00000396386 AFF2P51816 1311 aa17.67■□□□□ 0.42
CBX3-202ENST00000396386 BICDL1Q6ZP65 573 aa17.67■□□□□ 0.42
CBX3-202ENST00000396386 CDC37L1Q7L3B6 337 aa17.67■□□□□ 0.42
CBX3-202ENST00000396386 LLPHQ9BRT6 129 aaKnown RBP17.67■□□□□ 0.42
CBX3-202ENST00000396386 TCRBV5S4A2TA0A5A2 114 aa17.67■□□□□ 0.42
CBX3-202ENST00000396386 GTF2E1P29083 439 aaPredicted RBP17.67■□□□□ 0.42
CBX3-202ENST00000396386 HAND2P61296 217 aa17.67■□□□□ 0.42
CBX3-202ENST00000396386 APOBRQ0VD83 1088 aa17.67■□□□□ 0.42
CBX3-202ENST00000396386 SCRN1Q12765 414 aa17.67■□□□□ 0.42
CBX3-202ENST00000396386 MAP3K12Q12852 859 aa17.67■□□□□ 0.42
CBX3-202ENST00000396386 SNAP23O00161 211 aa17.66■□□□□ 0.42
CBX3-202ENST00000396386 FIBPO43427 364 aa17.66■□□□□ 0.42
CBX3-202ENST00000396386 GADD45BO75293 160 aaPredicted RBP17.66■□□□□ 0.42
CBX3-202ENST00000396386 ZPR1O75312 459 aa17.66■□□□□ 0.42
CBX3-202ENST00000396386 SLC10A5Q5PT55 438 aa17.66■□□□□ 0.42
CBX3-202ENST00000396386 C3orf67Q6ZVT6 689 aa17.66■□□□□ 0.42
CBX3-202ENST00000396386 FBXL16Q8N461 479 aa17.66■□□□□ 0.42
CBX3-202ENST00000396386 CHMP4CQ96CF2 233 aa17.66■□□□□ 0.42
CBX3-202ENST00000396386 SRP68Q9UHB9 627 aaKnown RBP17.66■□□□□ 0.42
CBX3-202ENST00000396386 RTCBQ9Y3I0 505 aaKnown RBP17.66■□□□□ 0.42
CBX3-202ENST00000396386 TNRC6CQ9HCJ0 1690 aaKnown RBP17.66■□□□□ 0.42
CBX3-202ENST00000396386 ZMYM6O95789 1325 aa17.65■□□□□ 0.42
CBX3-202ENST00000396386 ZNF213O14771 459 aa17.65■□□□□ 0.42
CBX3-202ENST00000396386 JAK2O60674 1132 aa17.65■□□□□ 0.42
CBX3-202ENST00000396386 FAM182BQ5T319 152 aa17.65■□□□□ 0.42
CBX3-202ENST00000396386 RALYLQ86SE5 291 aaKnown RBP17.65■□□□□ 0.42
CBX3-202ENST00000396386 AIDAQ96BJ3 306 aa17.65■□□□□ 0.42
CBX3-202ENST00000396386 WDR19Q8NEZ3 1342 aa17.65■□□□□ 0.42
CBX3-202ENST00000396386 UBE2HP62256 183 aa17.65■□□□□ 0.42
CBX3-202ENST00000396386 DNM1Q05193 864 aaKnown RBP17.65■□□□□ 0.42
CBX3-202ENST00000396386 ZNF772Q68DY9 489 aaPredicted RBP17.65■□□□□ 0.42
CBX3-202ENST00000396386 MB21D2Q8IYB1 491 aaPredicted RBP17.65■□□□□ 0.42
CBX3-202ENST00000396386 NCOA7Q8NI08 942 aa17.65■□□□□ 0.42
CBX3-202ENST00000396386 SMARCC2Q8TAQ2 1214 aa17.65■□□□□ 0.42
CBX3-202ENST00000396386 ZNF274Q96GC6 653 aaPredicted RBP17.65■□□□□ 0.42
CBX3-202ENST00000396386 SETDB2Q96T68 719 aa17.65■□□□□ 0.42
CBX3-202ENST00000396386 MCM5P33992 734 aa17.64■□□□□ 0.41
CBX3-202ENST00000396386 BCAMP50895 628 aa17.64■□□□□ 0.41
CBX3-202ENST00000396386 HMGN5P82970 282 aaKnown RBP17.64■□□□□ 0.41
CBX3-202ENST00000396386 SMIM5Q71RC9 77 aa17.64■□□□□ 0.41
CBX3-202ENST00000396386 BSDC1Q9NW68 430 aaPredicted RBP17.64■□□□□ 0.41
CBX3-202ENST00000396386 KIF3AQ9Y496 699 aa17.64■□□□□ 0.41
CBX3-202ENST00000396386 ZNF804BA4D1E1 1349 aa17.63■□□□□ 0.41
CBX3-202ENST00000396386 PHF14O94880 888 aa17.63■□□□□ 0.41
CBX3-202ENST00000396386 KRT85P78386 507 aa17.63■□□□□ 0.41
CBX3-202ENST00000396386 LRSAM1Q6UWE0 723 aa17.63■□□□□ 0.41
CBX3-202ENST00000396386 NBPF5PQ86XG9 351 aaPredicted RBP17.63■□□□□ 0.41
CBX3-202ENST00000396386 MAGEB6Q8N7X4 407 aa17.63■□□□□ 0.41
CBX3-202ENST00000396386 FAM184AQ8NB25 1140 aa17.63■□□□□ 0.41
CBX3-202ENST00000396386 NSUN7Q8NE18 718 aaKnown RBP17.63■□□□□ 0.41
CBX3-202ENST00000396386 MAST2Q6P0Q8 1798 aa17.63■□□□□ 0.41
CBX3-202ENST00000396386 UBR3Q6ZT12 1888 aa17.63■□□□□ 0.41
CBX3-202ENST00000396386 SYCE3A1L190 88 aa17.63■□□□□ 0.41
CBX3-202ENST00000396386 PRC1O43663 620 aa17.63■□□□□ 0.41
CBX3-202ENST00000396386 UBE4AQ14139 1066 aa17.63■□□□□ 0.41
CBX3-202ENST00000396386 CHST3Q7LGC8 479 aa17.63■□□□□ 0.41
CBX3-202ENST00000396386 STRBPQ96SI9 672 aaKnown RBP17.63■□□□□ 0.41
CBX3-202ENST00000396386 TRPC5Q9UL62 973 aaPredicted RBP17.63■□□□□ 0.41
CBX3-202ENST00000396386 NAP1L2Q9ULW6 460 aaPredicted RBP17.63■□□□□ 0.41
CBX3-202ENST00000396386 PTPDC1A2A3K4 754 aa17.62■□□□□ 0.41
CBX3-202ENST00000396386 APPP05067 770 aa17.62■□□□□ 0.41
CBX3-202ENST00000396386 NASPP49321 788 aaPredicted RBP17.62■□□□□ 0.41
CBX3-202ENST00000396386 EVCP57679 992 aa17.62■□□□□ 0.41
CBX3-202ENST00000396386 FERMT3Q86UX7 667 aa17.62■□□□□ 0.41
CBX3-202ENST00000396386 GNL3LQ9NVN8 582 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms