RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 CNNM3Q8NE01 707 aa7.6□□□□□ -1.19
BDNF-203ENST00000395978 MNS1Q8NEH6 495 aa7.6□□□□□ -1.19
BDNF-203ENST00000395978 CDCA7Q9BWT1 371 aaPredicted RBP7.6□□□□□ -1.19
BDNF-203ENST00000395978 IQSEC3Q9UPP2 1182 aaPredicted RBP7.6□□□□□ -1.19
BDNF-203ENST00000395978 ZDHHC9Q9Y397 364 aa7.6□□□□□ -1.19
BDNF-203ENST00000395978 H7C1W4 665 aa7.6□□□□□ -1.19
BDNF-203ENST00000395978 RAD21O60216 631 aa7.6□□□□□ -1.19
BDNF-203ENST00000395978 HSPD1P10809 573 aaKnown RBP7.6□□□□□ -1.19
BDNF-203ENST00000395978 PUM3Q15397 648 aaKnown RBP7.6□□□□□ -1.19
BDNF-203ENST00000395978 CCDC186Q7Z3E2 898 aa7.6□□□□□ -1.19
BDNF-203ENST00000395978 CATIPQ7Z7H3 387 aa7.6□□□□□ -1.19
BDNF-203ENST00000395978 KIF20BQ96Q89 1820 aa7.59□□□□□ -1.19
BDNF-203ENST00000395978 CIAO1O76071 339 aa7.59□□□□□ -1.19
BDNF-203ENST00000395978 CYP2E1P05181 493 aaPredicted RBP7.59□□□□□ -1.19
BDNF-203ENST00000395978 CYP21A2P08686 494 aa7.59□□□□□ -1.19
BDNF-203ENST00000395978 GNAT2P19087 354 aa7.59□□□□□ -1.19
BDNF-203ENST00000395978 DDIT3P35638 169 aa7.59□□□□□ -1.19
BDNF-203ENST00000395978 SYKP43405 635 aa7.59□□□□□ -1.19
BDNF-203ENST00000395978 PARP10Q53GL7 1025 aa7.59□□□□□ -1.19
BDNF-203ENST00000395978 CCDC102BQ68D86 513 aa7.59□□□□□ -1.19
BDNF-203ENST00000395978 MAGEB6Q8N7X4 407 aa7.59□□□□□ -1.19
BDNF-203ENST00000395978 PUS3Q9BZE2 481 aaKnown RBP7.59□□□□□ -1.19
BDNF-203ENST00000395978 ATG3Q9NT62 314 aa7.59□□□□□ -1.19
BDNF-203ENST00000395978 LUZP1Q86V48 1076 aa7.59□□□□□ -1.19
BDNF-203ENST00000395978 DZIP1Q86YF9 867 aaKnown RBP7.59□□□□□ -1.19
BDNF-203ENST00000395978 LPIN2Q92539 896 aa7.59□□□□□ -1.19
BDNF-203ENST00000395978 ESR2Q92731 530 aa7.59□□□□□ -1.19
BDNF-203ENST00000395978 ASAP1Q9ULH1 1129 aa7.59□□□□□ -1.19
BDNF-203ENST00000395978 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.59□□□□□ -1.19
BDNF-203ENST00000395978 PFKFB2O60825 505 aa7.59□□□□□ -1.2
BDNF-203ENST00000395978 LARGE1O95461 756 aa7.59□□□□□ -1.2
BDNF-203ENST00000395978 RTN1Q16799 776 aa7.59□□□□□ -1.2
BDNF-203ENST00000395978 ZMYM1Q5SVZ6 1142 aa7.59□□□□□ -1.2
BDNF-203ENST00000395978 TTC6Q86TZ1 520 aa7.59□□□□□ -1.2
BDNF-203ENST00000395978 PIBF1Q8WXW3 757 aa7.59□□□□□ -1.2
BDNF-203ENST00000395978 ZNF274Q96GC6 653 aaPredicted RBP7.59□□□□□ -1.2
BDNF-203ENST00000395978 PCMTD1Q96MG8 357 aaPredicted RBP7.59□□□□□ -1.2
BDNF-203ENST00000395978 TRIM34Q9BYJ4 488 aa7.59□□□□□ -1.2
BDNF-203ENST00000395978 CLSTN2Q9H4D0 955 aa7.59□□□□□ -1.2
BDNF-203ENST00000395978 ANGEL1Q9UNK9 670 aaKnown RBP7.59□□□□□ -1.2
BDNF-203ENST00000395978 USP42Q9H9J4 1324 aaKnown RBP7.58□□□□□ -1.2
BDNF-203ENST00000395978 MARCKSP29966 332 aaPredicted RBP7.58□□□□□ -1.2
BDNF-203ENST00000395978 GSDMDP57764 484 aa7.58□□□□□ -1.2
BDNF-203ENST00000395978 FAM160A1Q05DH4 1040 aa7.58□□□□□ -1.2
BDNF-203ENST00000395978 GIGYF2Q6Y7W6 1299 aaKnown RBP7.58□□□□□ -1.2
BDNF-203ENST00000395978 BRINP3Q76B58 766 aa7.58□□□□□ -1.2
BDNF-203ENST00000395978 ZNF526Q8TF50 670 aaPredicted RBP7.58□□□□□ -1.2
BDNF-203ENST00000395978 PRIMPOLQ96LW4 560 aa7.58□□□□□ -1.2
BDNF-203ENST00000395978 TTC14Q96N46 770 aa7.58□□□□□ -1.2
BDNF-203ENST00000395978 PXDNLA1KZ92 1463 aa7.58□□□□□ -1.2
BDNF-203ENST00000395978 MBD4O95243 580 aa7.58□□□□□ -1.2
BDNF-203ENST00000395978 USP5P45974 858 aa7.58□□□□□ -1.2
BDNF-203ENST00000395978 PTPN14Q15678 1187 aa7.58□□□□□ -1.2
BDNF-203ENST00000395978 TTLL5Q6EMB2 1281 aa7.58□□□□□ -1.2
BDNF-203ENST00000395978 TMEM87BQ96K49 555 aa7.58□□□□□ -1.2
BDNF-203ENST00000395978 NLRP3Q96P20 1036 aa7.58□□□□□ -1.2
BDNF-203ENST00000395978 MKNK2Q9HBH9 465 aa7.58□□□□□ -1.2
BDNF-203ENST00000395978 ANKIB1Q9P2G1 1089 aa7.58□□□□□ -1.2
BDNF-203ENST00000395978 ZNF142P52746 1687 aaPredicted RBP7.58□□□□□ -1.2
BDNF-203ENST00000395978 C1orf167Q5SNV9 1468 aa7.58□□□□□ -1.2
BDNF-203ENST00000395978 MAP3K15Q6ZN16 1313 aa7.58□□□□□ -1.2
BDNF-203ENST00000395978 ZNF335Q9H4Z2 1342 aaPredicted RBP7.58□□□□□ -1.2
BDNF-203ENST00000395978 ITSN1Q15811 1721 aa7.58□□□□□ -1.2
BDNF-203ENST00000395978 B4E1Z4 1266 aa7.58□□□□□ -1.2
BDNF-203ENST00000395978 KIF2AO00139 706 aaPredicted RBP7.58□□□□□ -1.2
BDNF-203ENST00000395978 CTSWP56202 376 aa7.58□□□□□ -1.2
BDNF-203ENST00000395978 NBPF5PQ86XG9 351 aaPredicted RBP7.58□□□□□ -1.2
BDNF-203ENST00000395978 NSFL1CQ9UNZ2 370 aaKnown RBP7.58□□□□□ -1.2
BDNF-203ENST00000395978 TNNT1P13805 278 aa7.57□□□□□ -1.2
BDNF-203ENST00000395978 LIG1P18858 919 aa7.57□□□□□ -1.2
BDNF-203ENST00000395978 RXRAP19793 462 aa7.57□□□□□ -1.2
BDNF-203ENST00000395978 PPFIBP1Q86W92 1011 aa7.57□□□□□ -1.2
BDNF-203ENST00000395978 MIGA1Q8NAN2 632 aa7.57□□□□□ -1.2
BDNF-203ENST00000395978 ZNF287Q9HBT7 754 aa7.57□□□□□ -1.2
BDNF-203ENST00000395978 CCDC87Q9NVE4 849 aa7.57□□□□□ -1.2
BDNF-203ENST00000395978 NCOA3Q9Y6Q9 1424 aa7.57□□□□□ -1.2
BDNF-203ENST00000395978 FGAP02671 866 aa7.57□□□□□ -1.2
BDNF-203ENST00000395978 ISM2Q6H9L7 571 aa7.57□□□□□ -1.2
BDNF-203ENST00000395978 C16orf45Q96MC5 204 aaPredicted RBP7.57□□□□□ -1.2
BDNF-203ENST00000395978 SETDB2Q96T68 719 aa7.57□□□□□ -1.2
BDNF-203ENST00000395978 ARGLU1Q9NWB6 273 aaPredicted RBP7.57□□□□□ -1.2
BDNF-203ENST00000395978 DYNC1I1O14576 645 aa7.57□□□□□ -1.2
BDNF-203ENST00000395978 SOGA3Q5TF21 947 aa7.57□□□□□ -1.2
BDNF-203ENST00000395978 OTUD7BQ6GQQ9 843 aa7.57□□□□□ -1.2
BDNF-203ENST00000395978 TICAM2Q86XR7 235 aa7.57□□□□□ -1.2
BDNF-203ENST00000395978 CRNKL1Q9BZJ0 848 aaKnown RBP7.57□□□□□ -1.2
BDNF-203ENST00000395978 MROH5Q6ZUA9 1318 aa7.57□□□□□ -1.2
BDNF-203ENST00000395978 SALL3Q9BXA9 1300 aa7.57□□□□□ -1.2
BDNF-203ENST00000395978 ZNF532Q9HCE3 1301 aa7.57□□□□□ -1.2
BDNF-203ENST00000395978 MAGEB6P1A0A0J9YX57 407 aa7.56□□□□□ -1.2
BDNF-203ENST00000395978 A0A1B0GVL5 298 aa7.56□□□□□ -1.2
BDNF-203ENST00000395978 ADORA1P30542 326 aa7.56□□□□□ -1.2
BDNF-203ENST00000395978 PDE4BQ07343 736 aa7.56□□□□□ -1.2
BDNF-203ENST00000395978 SPTY2D1Q68D10 685 aaPredicted RBP7.56□□□□□ -1.2
BDNF-203ENST00000395978 ZNF444Q8N0Y2 327 aaPredicted RBP7.56□□□□□ -1.2
BDNF-203ENST00000395978 AOPEPQ8N6M6 819 aa7.56□□□□□ -1.2
BDNF-203ENST00000395978 SMARCE1Q969G3 411 aa7.56□□□□□ -1.2
BDNF-203ENST00000395978 TSPY2A6NKD2 308 aa7.56□□□□□ -1.2
BDNF-203ENST00000395978 LDHCP07864 332 aa7.56□□□□□ -1.2
BDNF-203ENST00000395978 TOP1P11387 765 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms