RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 ARHGAP29Q52LW3 1261 aa18.64■□□□□ 0.57
PCDH1-203ENST00000394536 PLBD2Q8NHP8 589 aa18.64■□□□□ 0.57
PCDH1-203ENST00000394536 CLIC4Q9Y696 253 aa18.64■□□□□ 0.57
PCDH1-203ENST00000394536 TMEM131LA2VDJ0 1609 aa18.63■□□□□ 0.57
PCDH1-203ENST00000394536 OGFRQ9NZT2 677 aa18.63■□□□□ 0.57
PCDH1-203ENST00000394536 CDC42BPGQ6DT37 1551 aa18.63■□□□□ 0.57
PCDH1-203ENST00000394536 CCDC66A2RUB6 948 aa18.63■□□□□ 0.57
PCDH1-203ENST00000394536 ZBTB43O43298 467 aa18.63■□□□□ 0.57
PCDH1-203ENST00000394536 ADD1P35611 737 aaKnown RBP18.63■□□□□ 0.57
PCDH1-203ENST00000394536 CCDC150Q8NCX0 1101 aa18.63■□□□□ 0.57
PCDH1-203ENST00000394536 UBAC1Q9BSL1 405 aa18.63■□□□□ 0.57
PCDH1-203ENST00000394536 B4E1Z4 1266 aa18.62■□□□□ 0.57
PCDH1-203ENST00000394536 FEZ1Q99689 392 aa18.62■□□□□ 0.57
PCDH1-203ENST00000394536 ZKSCAN3Q9BRR0 538 aa18.62■□□□□ 0.57
PCDH1-203ENST00000394536 NACAP1Q9BZK3 213 aa18.62■□□□□ 0.57
PCDH1-203ENST00000394536 SPTLC3Q9NUV7 552 aa18.62■□□□□ 0.57
PCDH1-203ENST00000394536 ZAP70P43403 619 aa18.62■□□□□ 0.57
PCDH1-203ENST00000394536 DPCR1Q3MIW9 517 aa18.62■□□□□ 0.57
PCDH1-203ENST00000394536 ANO1Q5XXA6 986 aa18.62■□□□□ 0.57
PCDH1-203ENST00000394536 XAGE2Q96GT9 111 aa18.62■□□□□ 0.57
PCDH1-203ENST00000394536 XBP1P17861 261 aa18.62■□□□□ 0.57
PCDH1-203ENST00000394536 GPS2Q13227 327 aa18.62■□□□□ 0.57
PCDH1-203ENST00000394536 TMOD3Q9NYL9 352 aa18.62■□□□□ 0.57
PCDH1-203ENST00000394536 KIAA1468Q9P260 1216 aa18.62■□□□□ 0.57
PCDH1-203ENST00000394536 CEP170BQ9Y4F5 1589 aaPredicted RBP18.62■□□□□ 0.57
PCDH1-203ENST00000394536 REREQ9P2R6 1566 aa18.61■□□□□ 0.57
PCDH1-203ENST00000394536 SSRP1Q08945 709 aaKnown RBP18.61■□□□□ 0.57
PCDH1-203ENST00000394536 PI16Q6UXB8 463 aa18.61■□□□□ 0.57
PCDH1-203ENST00000394536 ANKRD20A12PQ8NF67 263 aa18.61■□□□□ 0.57
PCDH1-203ENST00000394536 ZNF397Q8NF99 534 aaPredicted RBP18.61■□□□□ 0.57
PCDH1-203ENST00000394536 ERCC6LQ2NKX8 1250 aa18.61■□□□□ 0.57
PCDH1-203ENST00000394536 GPAA1O43292 621 aa18.61■□□□□ 0.57
PCDH1-203ENST00000394536 ZSCAN12O43309 604 aa18.61■□□□□ 0.57
PCDH1-203ENST00000394536 PHKG2P15735 406 aa18.61■□□□□ 0.57
PCDH1-203ENST00000394536 ST3GAL1Q11201 340 aa18.61■□□□□ 0.57
PCDH1-203ENST00000394536 FILIP1LQ4L180 1135 aa18.61■□□□□ 0.57
PCDH1-203ENST00000394536 GTPBP4Q9BZE4 634 aaKnown RBP18.61■□□□□ 0.57
PCDH1-203ENST00000394536 RCOR1Q9UKL0 485 aa18.61■□□□□ 0.57
PCDH1-203ENST00000394536 DLC1Q96QB1 1528 aa18.61■□□□□ 0.57
PCDH1-203ENST00000394536 USP27XA6NNY8 438 aa18.6■□□□□ 0.57
PCDH1-203ENST00000394536 FGAP02671 866 aa18.6■□□□□ 0.57
PCDH1-203ENST00000394536 GTF2F1P35269 517 aaKnown RBP eCLIP18.6■□□□□ 0.57
PCDH1-203ENST00000394536 AFMP43652 599 aa18.6■□□□□ 0.57
PCDH1-203ENST00000394536 FANCCQ00597 558 aa18.6■□□□□ 0.57
PCDH1-203ENST00000394536 MYSM1Q5VVJ2 828 aa18.6■□□□□ 0.57
PCDH1-203ENST00000394536 GOLGA6L1Q8N7Z2 621 aa18.6■□□□□ 0.57
PCDH1-203ENST00000394536 ZCRB1Q8TBF4 217 aaKnown RBP18.6■□□□□ 0.57
PCDH1-203ENST00000394536 ZFYP08048 801 aaPredicted RBP18.6■□□□□ 0.57
PCDH1-203ENST00000394536 KAZALD1Q96I82 304 aa18.6■□□□□ 0.57
PCDH1-203ENST00000394536 ANKRD18BA2A2Z9 1011 aa18.59■□□□□ 0.57
PCDH1-203ENST00000394536 CASQ1P31415 396 aa18.59■□□□□ 0.57
PCDH1-203ENST00000394536 ADALQ6DHV7 355 aa18.59■□□□□ 0.57
PCDH1-203ENST00000394536 ZNF710Q8N1W2 664 aa18.59■□□□□ 0.57
PCDH1-203ENST00000394536 RAI14Q9P0K7 980 aa18.59■□□□□ 0.57
PCDH1-203ENST00000394536 IFT172Q9UG01 1749 aa18.59■□□□□ 0.57
PCDH1-203ENST00000394536 STARD3NLO95772 234 aa18.59■□□□□ 0.57
PCDH1-203ENST00000394536 ADORA1P30542 326 aa18.59■□□□□ 0.57
PCDH1-203ENST00000394536 STX17P56962 302 aa18.59■□□□□ 0.57
PCDH1-203ENST00000394536 GOLGA8FQ08AF8 430 aa18.59■□□□□ 0.57
PCDH1-203ENST00000394536 GOLGA8DPQ0D2H9 430 aa18.59■□□□□ 0.57
PCDH1-203ENST00000394536 BMS1Q14692 1282 aaKnown RBP18.59■□□□□ 0.57
PCDH1-203ENST00000394536 KARSQ15046 597 aaKnown RBP18.59■□□□□ 0.57
PCDH1-203ENST00000394536 GOLPH3LQ9H4A5 285 aa18.59■□□□□ 0.57
PCDH1-203ENST00000394536 MRFAP1L1Q96HT8 127 aa18.58■□□□□ 0.57
PCDH1-203ENST00000394536 AIFM3Q96NN9 605 aa18.58■□□□□ 0.57
PCDH1-203ENST00000394536 DSCC1Q9BVC3 393 aa18.58■□□□□ 0.57
PCDH1-203ENST00000394536 A0A0G2JLW4 131 aa18.58■□□□□ 0.56
PCDH1-203ENST00000394536 NCBP1Q09161 790 aaKnown RBP18.58■□□□□ 0.56
PCDH1-203ENST00000394536 STOX1Q6ZVD7 989 aa18.58■□□□□ 0.56
PCDH1-203ENST00000394536 SIGLEC1Q9BZZ2 1709 aa18.58■□□□□ 0.56
PCDH1-203ENST00000394536 ERO1AQ96HE7 468 aa18.58■□□□□ 0.56
PCDH1-203ENST00000394536 FUCA2Q9BTY2 467 aa18.58■□□□□ 0.56
PCDH1-203ENST00000394536 BRAPQ7Z569 592 aa18.57■□□□□ 0.56
PCDH1-203ENST00000394536 OSBP2Q969R2 916 aa18.57■□□□□ 0.56
PCDH1-203ENST00000394536 NOL10Q9BSC4 688 aaKnown RBP18.57■□□□□ 0.56
PCDH1-203ENST00000394536 DACH1Q9UI36 760 aa18.57■□□□□ 0.56
PCDH1-203ENST00000394536 PREX1Q8TCU6 1659 aa18.57■□□□□ 0.56
PCDH1-203ENST00000394536 PFKFB1P16118 471 aa18.57■□□□□ 0.56
PCDH1-203ENST00000394536 PNOCQ13519 176 aa18.57■□□□□ 0.56
PCDH1-203ENST00000394536 SMARCE1Q969G3 411 aa18.57■□□□□ 0.56
PCDH1-203ENST00000394536 CLIC6Q96NY7 704 aa18.57■□□□□ 0.56
PCDH1-203ENST00000394536 MAST3O60307 1309 aa18.57■□□□□ 0.56
PCDH1-203ENST00000394536 RANBP6O60518 1105 aaKnown RBP18.57■□□□□ 0.56
PCDH1-203ENST00000394536 IPO7O95373 1038 aaKnown RBP18.57■□□□□ 0.56
PCDH1-203ENST00000394536 MAP3K12Q12852 859 aa18.57■□□□□ 0.56
PCDH1-203ENST00000394536 ATL3Q6DD88 541 aa18.57■□□□□ 0.56
PCDH1-203ENST00000394536 CCDC12Q8WUD4 166 aaPredicted RBP18.57■□□□□ 0.56
PCDH1-203ENST00000394536 BRMS1Q9HCU9 246 aa18.57■□□□□ 0.56
PCDH1-203ENST00000394536 KIF4BQ2VIQ3 1234 aa18.56■□□□□ 0.56
PCDH1-203ENST00000394536 MYL5Q02045 173 aa18.56■□□□□ 0.56
PCDH1-203ENST00000394536 DHX8Q14562 1220 aaKnown RBP18.56■□□□□ 0.56
PCDH1-203ENST00000394536 SLC4A8Q2Y0W8 1093 aa18.56■□□□□ 0.56
PCDH1-203ENST00000394536 ZNF274Q96GC6 653 aaPredicted RBP18.56■□□□□ 0.56
PCDH1-203ENST00000394536 NRKQ7Z2Y5 1582 aa18.56■□□□□ 0.56
PCDH1-203ENST00000394536 ADAMTS13Q76LX8 1427 aa18.56■□□□□ 0.56
PCDH1-203ENST00000394536 HSP90B2PQ58FF3 399 aa18.56■□□□□ 0.56
PCDH1-203ENST00000394536 KRT40Q6A162 431 aa18.56■□□□□ 0.56
PCDH1-203ENST00000394536 MFSD6Q6ZSS7 791 aa18.56■□□□□ 0.56
PCDH1-203ENST00000394536 CMTR1Q8N1G2 835 aaKnown RBP18.56■□□□□ 0.56
PCDH1-203ENST00000394536 FBXO18Q8NFZ0 1043 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms