RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 CELA3AP09093 270 aa5.08□□□□□ -1.6
RNU6-1249P-201ENST00000363237 VIL1P09327 827 aaKnown RBP5.08□□□□□ -1.6
RNU6-1249P-201ENST00000363237 TFE3P19532 575 aaPredicted RBP5.08□□□□□ -1.6
RNU6-1249P-201ENST00000363237 LMNB1P20700 586 aa5.08□□□□□ -1.6
RNU6-1249P-201ENST00000363237 ITPKAP23677 461 aa5.08□□□□□ -1.6
RNU6-1249P-201ENST00000363237 MCM4P33991 863 aa5.08□□□□□ -1.6
RNU6-1249P-201ENST00000363237 SLC19A1P41440 591 aa5.08□□□□□ -1.6
RNU6-1249P-201ENST00000363237 POU4F2Q12837 409 aa5.08□□□□□ -1.6
RNU6-1249P-201ENST00000363237 SQSTM1Q13501 440 aa5.08□□□□□ -1.6
RNU6-1249P-201ENST00000363237 MPP2Q14168 576 aa5.08□□□□□ -1.6
RNU6-1249P-201ENST00000363237 CWF19L2Q2TBE0 894 aaKnown RBP5.08□□□□□ -1.6
RNU6-1249P-201ENST00000363237 GORABQ5T7V8 394 aa5.08□□□□□ -1.6
RNU6-1249P-201ENST00000363237 KRT26Q7Z3Y9 468 aa5.08□□□□□ -1.6
RNU6-1249P-201ENST00000363237 CCAR1Q8IX12 1150 aaKnown RBP5.08□□□□□ -1.6
RNU6-1249P-201ENST00000363237 REXO1Q8N1G1 1221 aaKnown RBP5.08□□□□□ -1.6
RNU6-1249P-201ENST00000363237 FAM169BQ8N8A8 192 aa5.08□□□□□ -1.6
RNU6-1249P-201ENST00000363237 JMYQ8N9B5 988 aa5.08□□□□□ -1.6
RNU6-1249P-201ENST00000363237 PRPF38AQ8NAV1 312 aaKnown RBP5.08□□□□□ -1.6
RNU6-1249P-201ENST00000363237 GATAD2BQ8WXI9 593 aa5.08□□□□□ -1.6
RNU6-1249P-201ENST00000363237 CCDC136Q96JN2 1154 aa5.08□□□□□ -1.6
RNU6-1249P-201ENST00000363237 CEP89Q96ST8 783 aa5.08□□□□□ -1.6
RNU6-1249P-201ENST00000363237 INSM2Q96T92 566 aaPredicted RBP5.08□□□□□ -1.6
RNU6-1249P-201ENST00000363237 POLMQ9NP87 494 aaPredicted RBP5.08□□□□□ -1.6
RNU6-1249P-201ENST00000363237 BRD7Q9NPI1 651 aa5.08□□□□□ -1.6
RNU6-1249P-201ENST00000363237 DZANK1Q9NVP4 752 aa5.08□□□□□ -1.6
RNU6-1249P-201ENST00000363237 GEMIN8Q9NWZ8 242 aaKnown RBP5.08□□□□□ -1.6
RNU6-1249P-201ENST00000363237 G3BP2Q9UN86 482 aaKnown RBP5.08□□□□□ -1.6
RNU6-1249P-201ENST00000363237 ENC1O14682 589 aa5.07□□□□□ -1.6
RNU6-1249P-201ENST00000363237 TRIM37O94972 964 aa5.07□□□□□ -1.6
RNU6-1249P-201ENST00000363237 KIF4AO95239 1232 aa5.07□□□□□ -1.6
RNU6-1249P-201ENST00000363237 MSX1P28360 303 aa5.07□□□□□ -1.6
RNU6-1249P-201ENST00000363237 CASP7P55210 303 aa5.07□□□□□ -1.6
RNU6-1249P-201ENST00000363237 KCNQ4P56696 695 aa5.07□□□□□ -1.6
RNU6-1249P-201ENST00000363237 MTERF2Q49AM1 385 aa5.07□□□□□ -1.6
RNU6-1249P-201ENST00000363237 RPS26P11Q5JNZ5 115 aaPredicted RBP5.07□□□□□ -1.6
RNU6-1249P-201ENST00000363237 SAMD5Q5TGI4 173 aa5.07□□□□□ -1.6
RNU6-1249P-201ENST00000363237 FBXW10Q5XX13 1052 aa5.07□□□□□ -1.6
RNU6-1249P-201ENST00000363237 FERMT3Q86UX7 667 aa5.07□□□□□ -1.6
RNU6-1249P-201ENST00000363237 RBBP8NLQ8NC74 664 aaPredicted RBP5.07□□□□□ -1.6
RNU6-1249P-201ENST00000363237 ZNF669Q96BR6 464 aaPredicted RBP5.07□□□□□ -1.6
RNU6-1249P-201ENST00000363237 OSMRQ99650 979 aa5.07□□□□□ -1.6
RNU6-1249P-201ENST00000363237 MIR1-1HGQ9H1L0 117 aa5.07□□□□□ -1.6
RNU6-1249P-201ENST00000363237 TIMMDC1Q9NPL8 285 aa5.07□□□□□ -1.6
RNU6-1249P-201ENST00000363237 HOMER2Q9NSB8 354 aa5.07□□□□□ -1.6
RNU6-1249P-201ENST00000363237 PLAAQ9Y263 795 aa5.07□□□□□ -1.6
RNU6-1249P-201ENST00000363237 SAMM50Q9Y512 469 aa5.07□□□□□ -1.6
RNU6-1249P-201ENST00000363237 KDM2BQ8NHM5 1336 aa5.06□□□□□ -1.6
RNU6-1249P-201ENST00000363237 MMP20O60882 483 aa5.06□□□□□ -1.6
RNU6-1249P-201ENST00000363237 SASH3O75995 380 aa5.06□□□□□ -1.6
RNU6-1249P-201ENST00000363237 UPP2O95045 317 aa5.06□□□□□ -1.6
RNU6-1249P-201ENST00000363237 MAP4K4O95819 1239 aaPredicted RBP5.06□□□□□ -1.6
RNU6-1249P-201ENST00000363237 F13A1P00488 732 aa5.06□□□□□ -1.6
RNU6-1249P-201ENST00000363237 HCLS1P14317 486 aaPredicted RBP5.06□□□□□ -1.6
RNU6-1249P-201ENST00000363237 SOX18P35713 384 aa5.06□□□□□ -1.6
RNU6-1249P-201ENST00000363237 CCINQ13939 588 aa5.06□□□□□ -1.6
RNU6-1249P-201ENST00000363237 ZNF787Q6DD87 383 aa5.06□□□□□ -1.6
RNU6-1249P-201ENST00000363237 LYSMD3Q7Z3D4 306 aa5.06□□□□□ -1.6
RNU6-1249P-201ENST00000363237 PRICKLE2Q7Z3G6 844 aa5.06□□□□□ -1.6
RNU6-1249P-201ENST00000363237 NLRP8Q86W28 1048 aa5.06□□□□□ -1.6
RNU6-1249P-201ENST00000363237 NCAPG2Q86XI2 1143 aa5.06□□□□□ -1.6
RNU6-1249P-201ENST00000363237 FMNL3Q8IVF7 1028 aa5.06□□□□□ -1.6
RNU6-1249P-201ENST00000363237 ST13P5Q8NFI4 369 aaPredicted RBP5.06□□□□□ -1.6
RNU6-1249P-201ENST00000363237 JDP2Q8WYK2 163 aa5.06□□□□□ -1.6
RNU6-1249P-201ENST00000363237 ZKSCAN3Q9BRR0 538 aa5.06□□□□□ -1.6
RNU6-1249P-201ENST00000363237 CRISPLD1Q9H336 500 aa5.06□□□□□ -1.6
RNU6-1249P-201ENST00000363237 EFCC1Q9HA90 598 aa5.06□□□□□ -1.6
RNU6-1249P-201ENST00000363237 SEC31BQ9NQW1 1179 aa5.06□□□□□ -1.6
RNU6-1249P-201ENST00000363237 ZNRF3Q9ULT6 936 aa5.06□□□□□ -1.6
RNU6-1249P-201ENST00000363237 KCNH4Q9UQ05 1017 aa5.06□□□□□ -1.6
RNU6-1249P-201ENST00000363237 LEMD3Q9Y2U8 911 aa5.06□□□□□ -1.6
RNU6-1249P-201ENST00000363237 FAM221AA4D161 298 aa5.05□□□□□ -1.6
RNU6-1249P-201ENST00000363237 TLR3O15455 904 aaKnown RBP5.05□□□□□ -1.6
RNU6-1249P-201ENST00000363237 PSAPP07602 524 aa5.05□□□□□ -1.6
RNU6-1249P-201ENST00000363237 TARSP26639 723 aaKnown RBP5.05□□□□□ -1.6
RNU6-1249P-201ENST00000363237 GRIA4P48058 902 aa5.05□□□□□ -1.6
RNU6-1249P-201ENST00000363237 HYAL2Q12891 473 aa5.05□□□□□ -1.6
RNU6-1249P-201ENST00000363237 ODR4Q5SWX8 454 aa5.05□□□□□ -1.6
RNU6-1249P-201ENST00000363237 SPRYD7Q5W111 196 aa5.05□□□□□ -1.6
RNU6-1249P-201ENST00000363237 LARP1BQ659C4 914 aaKnown RBP5.05□□□□□ -1.6
RNU6-1249P-201ENST00000363237 BNC2Q6ZN30 1099 aaPredicted RBP5.05□□□□□ -1.6
RNU6-1249P-201ENST00000363237 EXOC8Q8IYI6 725 aa5.05□□□□□ -1.6
RNU6-1249P-201ENST00000363237 MORC4Q8TE76 937 aa5.05□□□□□ -1.6
RNU6-1249P-201ENST00000363237 CYP8B1Q9UNU6 501 aa5.05□□□□□ -1.6
RNU6-1249P-201ENST00000363237 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.05□□□□□ -1.6
RNU6-1249P-201ENST00000363237 A0A096LPE4 126 aa5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 A0A1W2PPZ6 126 aa5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 CILPO75339 1184 aa5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 DDAH1O94760 285 aa5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 GJB6O95452 261 aa5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 ASMTLO95671 621 aa5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 BPNT1O95861 308 aa5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 RARAP10276 462 aa5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 CTSOP43234 321 aaPredicted RBP5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 EXOSC10Q01780 885 aaKnown RBP5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 PPP2R3AQ06190 1150 aa5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 SEPT6Q14141 434 aa5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 LRRC14Q15048 493 aa5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 TKFCQ3LXA3 575 aa5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 DALRD3Q5D0E6 543 aaKnown RBP5.04□□□□□ -1.6
RNU6-1249P-201ENST00000363237 GK5Q6ZS86 529 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms