RNA–Protein interactions for RNA: ENST00000342085.8

PDPK1-202, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDPK1, Length 7,241 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-202ENST00000342085 ALG1Q9BT22 464 aa16.34■□□□□ 0.21
PDPK1-202ENST00000342085 GADL1Q6ZQY3 521 aa16.34■□□□□ 0.21
PDPK1-202ENST00000342085 TMTC2Q8N394 836 aa16.34■□□□□ 0.21
PDPK1-202ENST00000342085 KIF18AQ8NI77 898 aa16.34■□□□□ 0.21
PDPK1-202ENST00000342085 OATP04181 439 aa16.34■□□□□ 0.21
PDPK1-202ENST00000342085 KRT19P08727 400 aa16.34■□□□□ 0.21
PDPK1-202ENST00000342085 CDAN1Q8IWY9 1227 aa16.34■□□□□ 0.21
PDPK1-202ENST00000342085 LRRC59Q96AG4 307 aaKnown RBP16.34■□□□□ 0.21
PDPK1-202ENST00000342085 GRIN2BQ13224 1484 aa16.34■□□□□ 0.21
PDPK1-202ENST00000342085 HSF2BPO75031 334 aa16.34■□□□□ 0.21
PDPK1-202ENST00000342085 IFRD2Q12894 506 aaPredicted RBP16.34■□□□□ 0.21
PDPK1-202ENST00000342085 DPP8Q6V1X1 898 aaPredicted RBP16.34■□□□□ 0.21
PDPK1-202ENST00000342085 ECHDC1Q9NTX5 307 aa16.34■□□□□ 0.21
PDPK1-202ENST00000342085 RBM27Q9P2N5 1060 aaKnown RBP16.34■□□□□ 0.21
PDPK1-202ENST00000342085 SMTNP53814 917 aa16.34■□□□□ 0.21
PDPK1-202ENST00000342085 SKIV2LQ15477 1246 aaKnown RBP16.34■□□□□ 0.21
PDPK1-202ENST00000342085 RNF216Q9NWF9 866 aaPredicted RBP16.34■□□□□ 0.21
PDPK1-202ENST00000342085 ABT1Q9ULW3 272 aaKnown RBP16.34■□□□□ 0.21
PDPK1-202ENST00000342085 SMIM23A6NLE4 172 aa16.33■□□□□ 0.21
PDPK1-202ENST00000342085 TEX11Q8IYF3 940 aa16.33■□□□□ 0.21
PDPK1-202ENST00000342085 PLIN2Q99541 437 aa16.33■□□□□ 0.21
PDPK1-202ENST00000342085 POLR3GO15318 223 aaPredicted RBP16.33■□□□□ 0.21
PDPK1-202ENST00000342085 ZSWIM4Q9H7M6 989 aa16.33■□□□□ 0.21
PDPK1-202ENST00000342085 GJB2P29033 226 aa16.33■□□□□ 0.2
PDPK1-202ENST00000342085 CCDC25Q86WR0 208 aa16.33■□□□□ 0.2
PDPK1-202ENST00000342085 LRRC2Q9BYS8 371 aa16.33■□□□□ 0.2
PDPK1-202ENST00000342085 FRMD4BQ9Y2L6 1034 aa16.33■□□□□ 0.2
PDPK1-202ENST00000342085 INF2Q27J81 1249 aa16.33■□□□□ 0.2
PDPK1-202ENST00000342085 ESYT2A0FGR8 921 aa16.33■□□□□ 0.2
PDPK1-202ENST00000342085 BTG4Q9NY30 223 aa16.33■□□□□ 0.2
PDPK1-202ENST00000342085 LIMCH1Q9UPQ0 1083 aa16.33■□□□□ 0.2
PDPK1-202ENST00000342085 CCDC183Q5T5S1 534 aa16.32■□□□□ 0.2
PDPK1-202ENST00000342085 MED10Q9BTT4 135 aa16.32■□□□□ 0.2
PDPK1-202ENST00000342085 TCP10Q12799 353 aa16.32■□□□□ 0.2
PDPK1-202ENST00000342085 TTC6Q86TZ1 520 aa16.32■□□□□ 0.2
PDPK1-202ENST00000342085 PARP1P09874 1014 aaKnown RBP16.32■□□□□ 0.2
PDPK1-202ENST00000342085 MCM7P33993 719 aa16.32■□□□□ 0.2
PDPK1-202ENST00000342085 PDE6BP35913 854 aa16.32■□□□□ 0.2
PDPK1-202ENST00000342085 COPS6Q7L5N1 327 aa16.32■□□□□ 0.2
PDPK1-202ENST00000342085 METTL13Q8N6R0 699 aa16.32■□□□□ 0.2
PDPK1-202ENST00000342085 DCPSQ96C86 337 aaKnown RBP16.32■□□□□ 0.2
PDPK1-202ENST00000342085 ANKFY1Q9P2R3 1169 aa16.32■□□□□ 0.2
PDPK1-202ENST00000342085 HFM1A2PYH4 1435 aa16.32■□□□□ 0.2
PDPK1-202ENST00000342085 KIF2AO00139 706 aaPredicted RBP16.32■□□□□ 0.2
PDPK1-202ENST00000342085 IRS4O14654 1257 aaPredicted RBP16.32■□□□□ 0.2
PDPK1-202ENST00000342085 TSTA3Q13630 321 aaPredicted RBP16.32■□□□□ 0.2
PDPK1-202ENST00000342085 PPP1R7Q15435 360 aa16.32■□□□□ 0.2
PDPK1-202ENST00000342085 OTUD7BQ6GQQ9 843 aa16.32■□□□□ 0.2
PDPK1-202ENST00000342085 NOL3O60936 208 aaKnown RBP16.31■□□□□ 0.2
PDPK1-202ENST00000342085 PALM3A6NDB9 673 aaPredicted RBP16.31■□□□□ 0.2
PDPK1-202ENST00000342085 STK10O94804 968 aaKnown RBP16.31■□□□□ 0.2
PDPK1-202ENST00000342085 RAPGEF1Q13905 1077 aa16.31■□□□□ 0.2
PDPK1-202ENST00000342085 FAM98CQ17RN3 349 aaKnown RBP16.31■□□□□ 0.2
PDPK1-202ENST00000342085 PARD3BQ8TEW8 1205 aa16.31■□□□□ 0.2
PDPK1-202ENST00000342085 PLCB4Q15147 1175 aa16.31■□□□□ 0.2
PDPK1-202ENST00000342085 TRIM7Q9C029 511 aa16.31■□□□□ 0.2
PDPK1-202ENST00000342085 PPME1Q9Y570 386 aa16.31■□□□□ 0.2
PDPK1-202ENST00000342085 TACC3Q9Y6A5 838 aa16.31■□□□□ 0.2
PDPK1-202ENST00000342085 SYKP43405 635 aa16.31■□□□□ 0.2
PDPK1-202ENST00000342085 SUPT20HQ8NEM7 779 aa16.31■□□□□ 0.2
PDPK1-202ENST00000342085 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.31■□□□□ 0.23e-7■■■■□ 20.8
PDPK1-202ENST00000342085 PSMA7O14818 248 aa16.3■□□□□ 0.2
PDPK1-202ENST00000342085 MAPK8IP2Q13387 824 aaPredicted RBP16.3■□□□□ 0.2
PDPK1-202ENST00000342085 STX1AQ16623 288 aa16.3■□□□□ 0.2
PDPK1-202ENST00000342085 NSMFQ6X4W1 530 aa16.3■□□□□ 0.2
PDPK1-202ENST00000342085 GGA1Q9UJY5 639 aa16.3■□□□□ 0.2
PDPK1-202ENST00000342085 SELENOSQ9BQE4 189 aa16.3■□□□□ 0.2
PDPK1-202ENST00000342085 CYLC1P35663 651 aaPredicted RBP16.3■□□□□ 0.2
PDPK1-202ENST00000342085 ERCC5P28715 1186 aaPredicted RBP16.3■□□□□ 0.2
PDPK1-202ENST00000342085 CARD10Q9BWT7 1032 aa16.3■□□□□ 0.2
PDPK1-202ENST00000342085 GABPB2Q8TAK5 448 aaPredicted RBP16.3■□□□□ 0.2
PDPK1-202ENST00000342085 SORBS3O60504 671 aa16.29■□□□□ 0.2
PDPK1-202ENST00000342085 CHPF2Q9P2E5 772 aa16.29■□□□□ 0.2
PDPK1-202ENST00000342085 TSHZ3Q63HK5 1081 aa16.29■□□□□ 0.2
PDPK1-202ENST00000342085 PPP4R4Q6NUP7 873 aa16.29■□□□□ 0.2
PDPK1-202ENST00000342085 GRPEL1Q9HAV7 217 aa16.29■□□□□ 0.2
PDPK1-202ENST00000342085 CAMSAP2Q08AD1 1489 aa16.29■□□□□ 0.2
PDPK1-202ENST00000342085 PPIP5K2O43314 1243 aa16.29■□□□□ 0.2
PDPK1-202ENST00000342085 LMBR1Q8WVP7 490 aa16.29■□□□□ 0.2
PDPK1-202ENST00000342085 PRPF6O94906 941 aaKnown RBP16.29■□□□□ 0.2
PDPK1-202ENST00000342085 VPS52Q8N1B4 723 aa16.29■□□□□ 0.2
PDPK1-202ENST00000342085 DHX58Q96C10 678 aa16.29■□□□□ 0.2
PDPK1-202ENST00000342085 WDR46O15213 610 aaKnown RBP16.29■□□□□ 0.2
PDPK1-202ENST00000342085 GNA11P29992 359 aa16.29■□□□□ 0.2
PDPK1-202ENST00000342085 USP21Q9UK80 565 aa16.29■□□□□ 0.2
PDPK1-202ENST00000342085 EHBP1Q8NDI1 1231 aa16.28■□□□□ 0.2
PDPK1-202ENST00000342085 KIFAP3Q92845 792 aa16.28■□□□□ 0.2
PDPK1-202ENST00000342085 NSRP1Q9H0G5 558 aaKnown RBP16.28■□□□□ 0.2
PDPK1-202ENST00000342085 ZFYP08048 801 aaPredicted RBP16.28■□□□□ 0.2
PDPK1-202ENST00000342085 CALML3P27482 149 aa16.28■□□□□ 0.2
PDPK1-202ENST00000342085 LMBR1LQ6UX01 489 aa16.28■□□□□ 0.2
PDPK1-202ENST00000342085 BMP15O95972 392 aa16.28■□□□□ 0.2
PDPK1-202ENST00000342085 KRT2P35908 639 aa16.28■□□□□ 0.2
PDPK1-202ENST00000342085 KIF9Q9HAQ2 790 aa16.28■□□□□ 0.2
PDPK1-202ENST00000342085 NCKAP5LQ9HCH0 1330 aa16.28■□□□□ 0.2
PDPK1-202ENST00000342085 DIXDC1Q155Q3 683 aa16.28■□□□□ 0.2
PDPK1-202ENST00000342085 LEO1Q8WVC0 666 aaPredicted RBP16.28■□□□□ 0.2
PDPK1-202ENST00000342085 SRRTQ9BXP5 876 aaKnown RBP16.28■□□□□ 0.2
PDPK1-202ENST00000342085 USH1GQ495M9 461 aa16.28■□□□□ 0.2
PDPK1-202ENST00000342085 ZNF569Q5MCW4 686 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms