RNA–Protein interactions for RNA: ENST00000324932.11

NUP98-201, Transcript of nucleoporin 98, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP98, Length 6,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-201ENST00000324932 GJC1P36383 396 aa16.48■□□□□ 0.23
NUP98-201ENST00000324932 GSTO1P78417 241 aa16.48■□□□□ 0.23
NUP98-201ENST00000324932 ZBTB3Q9H5J0 574 aa16.48■□□□□ 0.23
NUP98-201ENST00000324932 CAMSAP2Q08AD1 1489 aa16.48■□□□□ 0.23
NUP98-201ENST00000324932 PPP1R2P41236 205 aa16.48■□□□□ 0.23
NUP98-201ENST00000324932 HS2ST1Q7LGA3 356 aa16.48■□□□□ 0.23
NUP98-201ENST00000324932 GPR161Q8N6U8 529 aaKnown RBP16.48■□□□□ 0.23
NUP98-201ENST00000324932 STX17P56962 302 aa16.47■□□□□ 0.23
NUP98-201ENST00000324932 NCAPD3P42695 1498 aa16.47■□□□□ 0.23
NUP98-201ENST00000324932 NCOA1Q15788 1441 aa16.47■□□□□ 0.23
NUP98-201ENST00000324932 SEL1L2Q5TEA6 688 aa16.47■□□□□ 0.23
NUP98-201ENST00000324932 SETSIPP0DME0 302 aa16.47■□□□□ 0.23
NUP98-201ENST00000324932 CCDC14Q49A88 953 aa16.47■□□□□ 0.23
NUP98-201ENST00000324932 FYB2Q5VWT5 728 aa16.47■□□□□ 0.23
NUP98-201ENST00000324932 IQUBQ8NA54 791 aa16.47■□□□□ 0.23
NUP98-201ENST00000324932 MSANTD4Q8NCY6 345 aa16.47■□□□□ 0.23
NUP98-201ENST00000324932 FAM184BQ9ULE4 1060 aa16.47■□□□□ 0.23
NUP98-201ENST00000324932 TMEM110-MUSTN1A8MSY1 372 aa16.47■□□□□ 0.23
NUP98-201ENST00000324932 WDR78Q5VTH9 848 aa16.47■□□□□ 0.23
NUP98-201ENST00000324932 SMC1BQ8NDV3 1235 aa16.46■□□□□ 0.23
NUP98-201ENST00000324932 C6orf50Q9HD87 102 aa16.46■□□□□ 0.23
NUP98-201ENST00000324932 FAM169AQ9Y6X4 670 aa16.46■□□□□ 0.23
NUP98-201ENST00000324932 CASQ2O14958 399 aaPredicted RBP16.46■□□□□ 0.23
NUP98-201ENST00000324932 GBP1P32455 592 aa16.46■□□□□ 0.23
NUP98-201ENST00000324932 NAIPQ13075 1403 aa16.46■□□□□ 0.23
NUP98-201ENST00000324932 GOLGA6CA6NDK9 693 aa16.46■□□□□ 0.23
NUP98-201ENST00000324932 GOLGA6DP0CG33 693 aa16.46■□□□□ 0.23
NUP98-201ENST00000324932 RPGRQ92834 1020 aaKnown RBP16.46■□□□□ 0.23
NUP98-201ENST00000324932 GOLGA6AQ9NYA3 693 aa16.46■□□□□ 0.23
NUP98-201ENST00000324932 GMNNO75496 209 aa16.46■□□□□ 0.23
NUP98-201ENST00000324932 ATP8B2P98198 1209 aa16.46■□□□□ 0.23
NUP98-201ENST00000324932 C8orf74Q6P047 294 aa16.46■□□□□ 0.23
NUP98-201ENST00000324932 INF2Q27J81 1249 aa16.46■□□□□ 0.22
NUP98-201ENST00000324932 HEATR3Q7Z4Q2 680 aa16.46■□□□□ 0.22
NUP98-201ENST00000324932 ACTN4O43707 911 aaKnown RBP16.45■□□□□ 0.22
NUP98-201ENST00000324932 BUB1BO60566 1050 aaPredicted RBP16.45■□□□□ 0.22
NUP98-201ENST00000324932 TSPY3P0CV98 308 aa16.45■□□□□ 0.22
NUP98-201ENST00000324932 TSPY8P0CW00 308 aa16.45■□□□□ 0.22
NUP98-201ENST00000324932 MYRIPQ8NFW9 859 aa16.45■□□□□ 0.22
NUP98-201ENST00000324932 MEIS3Q99687 375 aa16.45■□□□□ 0.22
NUP98-201ENST00000324932 PHF23Q9BUL5 403 aaPredicted RBP16.45■□□□□ 0.22
NUP98-201ENST00000324932 CSRNP2Q9H175 543 aa16.45■□□□□ 0.22
NUP98-201ENST00000324932 TTC41PQ6P2S7 1318 aa16.45■□□□□ 0.22
NUP98-201ENST00000324932 AK2P54819 239 aa16.45■□□□□ 0.22
NUP98-201ENST00000324932 FAM160A1Q05DH4 1040 aa16.45■□□□□ 0.22
NUP98-201ENST00000324932 CLUL1Q15846 466 aa16.45■□□□□ 0.22
NUP98-201ENST00000324932 USHBP1Q8N6Y0 703 aa16.45■□□□□ 0.22
NUP98-201ENST00000324932 ALDH1L1O75891 902 aa16.45■□□□□ 0.22
NUP98-201ENST00000324932 MPHOSPH6Q99547 160 aaKnown RBP16.45■□□□□ 0.22
NUP98-201ENST00000324932 NAPAP54920 295 aa16.45■□□□□ 0.22
NUP98-201ENST00000324932 ERCC6LQ2NKX8 1250 aa16.45■□□□□ 0.22
NUP98-201ENST00000324932 RUFY4Q6ZNE9 571 aa16.45■□□□□ 0.22
NUP98-201ENST00000324932 RTL9Q8NET4 1388 aa16.45■□□□□ 0.22
NUP98-201ENST00000324932 HPDP32754 393 aaPredicted RBP16.44■□□□□ 0.22
NUP98-201ENST00000324932 CEP85LQ5SZL2 805 aa16.44■□□□□ 0.22
NUP98-201ENST00000324932 CEP120Q8N960 986 aa16.44■□□□□ 0.22
NUP98-201ENST00000324932 NUTM2BA6NNL0 878 aaPredicted RBP16.44■□□□□ 0.22
NUP98-201ENST00000324932 NUTM2EB1AL46 878 aaPredicted RBP16.44■□□□□ 0.22
NUP98-201ENST00000324932 ELP1O95163 1332 aa16.44■□□□□ 0.22
NUP98-201ENST00000324932 VWA3BQ502W6 1294 aa16.44■□□□□ 0.22
NUP98-201ENST00000324932 VCXQ9H320 206 aa16.44■□□□□ 0.22
NUP98-201ENST00000324932 HDAC9Q9UKV0 1011 aa16.44■□□□□ 0.22
NUP98-201ENST00000324932 PTPDC1A2A3K4 754 aa16.44■□□□□ 0.22
NUP98-201ENST00000324932 FAM13AO94988 1023 aa16.44■□□□□ 0.22
NUP98-201ENST00000324932 GPTP24298 496 aa16.44■□□□□ 0.22
NUP98-201ENST00000324932 SLC4A4Q9Y6R1 1079 aa16.44■□□□□ 0.22
NUP98-201ENST00000324932 RIOK3O14730 519 aaKnown RBP16.44■□□□□ 0.22
NUP98-201ENST00000324932 PPP1R12CQ9BZL4 782 aa16.44■□□□□ 0.22
NUP98-201ENST00000324932 RAD50Q92878 1312 aa16.44■□□□□ 0.22
NUP98-201ENST00000324932 KRT2P35908 639 aa16.43■□□□□ 0.22
NUP98-201ENST00000324932 ARHGAP24Q8N264 748 aa16.43■□□□□ 0.22
NUP98-201ENST00000324932 MRPS9P82933 396 aaKnown RBP16.43■□□□□ 0.22
NUP98-201ENST00000324932 ATP5J2-PTCD1G3V325 749 aa16.43■□□□□ 0.22
NUP98-201ENST00000324932 RPL13P26373 211 aaKnown RBP16.43■□□□□ 0.22
NUP98-201ENST00000324932 CABS1Q96KC9 395 aa16.43■□□□□ 0.22
NUP98-201ENST00000324932 IFT20Q8IY31 132 aa16.43■□□□□ 0.22
NUP98-201ENST00000324932 PRG4Q92954 1404 aaPredicted RBP16.43■□□□□ 0.22
NUP98-201ENST00000324932 C6orf229H3BNL8 230 aa16.42■□□□□ 0.22
NUP98-201ENST00000324932 NMIQ13287 307 aaPredicted RBP16.42■□□□□ 0.22
NUP98-201ENST00000324932 CCDC38Q502W7 563 aa16.42■□□□□ 0.22
NUP98-201ENST00000324932 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.42■□□□□ 0.22
NUP98-201ENST00000324932 CYP7A1P22680 504 aa16.42■□□□□ 0.22
NUP98-201ENST00000324932 IL15P40933 162 aaPredicted RBP16.42■□□□□ 0.22
NUP98-201ENST00000324932 ZGPATQ8N5A5 531 aaKnown RBP16.42■□□□□ 0.22
NUP98-201ENST00000324932 IGSF22Q8N9C0 903 aa16.42■□□□□ 0.22
NUP98-201ENST00000324932 ARID4AP29374 1257 aaPredicted RBP16.42■□□□□ 0.22
NUP98-201ENST00000324932 RFC1P35251 1148 aaPredicted RBP16.42■□□□□ 0.22
NUP98-201ENST00000324932 ATP2B3Q16720 1220 aa16.42■□□□□ 0.22
NUP98-201ENST00000324932 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.42■□□□□ 0.22
NUP98-201ENST00000324932 PPFIA1Q13136 1202 aa16.42■□□□□ 0.22
NUP98-201ENST00000324932 CYP26C1Q6V0L0 522 aa16.42■□□□□ 0.22
NUP98-201ENST00000324932 RBSNQ9H1K0 784 aa16.42■□□□□ 0.22
NUP98-201ENST00000324932 ANKRD13DQ6ZTN6 518 aa16.41■□□□□ 0.22
NUP98-201ENST00000324932 VSIG1Q86XK7 387 aa16.41■□□□□ 0.22
NUP98-201ENST00000324932 DHX32Q7L7V1 743 aaKnown RBP16.41■□□□□ 0.22
NUP98-201ENST00000324932 ZNF354CQ86Y25 554 aa16.41■□□□□ 0.22
NUP98-201ENST00000324932 CARD6Q9BX69 1037 aa16.41■□□□□ 0.22
NUP98-201ENST00000324932 SNRPA1P09661 255 aaKnown RBP16.41■□□□□ 0.22
NUP98-201ENST00000324932 MCUR1Q96AQ8 359 aa16.41■□□□□ 0.22
NUP98-201ENST00000324932 ERCC5P28715 1186 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms