RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 LRRC8AQ8IWT6 810 aa17.1■□□□□ 0.33
KCTD3-201ENST00000259154 SLC39A6Q13433 755 aa17.1■□□□□ 0.33
KCTD3-201ENST00000259154 CCDC181Q5TID7 509 aa17.1■□□□□ 0.33
KCTD3-201ENST00000259154 USP31Q70CQ4 1352 aa17.09■□□□□ 0.33
KCTD3-201ENST00000259154 CYP2E1P05181 493 aaPredicted RBP17.09■□□□□ 0.33
KCTD3-201ENST00000259154 CCDC150Q8NCX0 1101 aa17.09■□□□□ 0.33
KCTD3-201ENST00000259154 ODF2Q5BJF6 829 aa17.09■□□□□ 0.33
KCTD3-201ENST00000259154 DDX17Q92841 729 aaKnown RBP17.09■□□□□ 0.33
KCTD3-201ENST00000259154 CHD2O14647 1828 aaKnown RBP17.09■□□□□ 0.33
KCTD3-201ENST00000259154 CTR9Q6PD62 1173 aa17.09■□□□□ 0.33
KCTD3-201ENST00000259154 ANKRD24Q8TF21 1146 aa17.09■□□□□ 0.33
KCTD3-201ENST00000259154 ZNF569Q5MCW4 686 aa17.08■□□□□ 0.33
KCTD3-201ENST00000259154 SEC62Q99442 399 aaKnown RBP17.08■□□□□ 0.33
KCTD3-201ENST00000259154 KCNF1Q9H3M0 494 aa17.08■□□□□ 0.33
KCTD3-201ENST00000259154 TTC21AQ8NDW8 1320 aa17.08■□□□□ 0.33
KCTD3-201ENST00000259154 IFIT1P09914 478 aaKnown RBP17.08■□□□□ 0.32
KCTD3-201ENST00000259154 ORAI2Q96SN7 254 aa17.08■□□□□ 0.32
KCTD3-201ENST00000259154 U3KPZ7 1027 aaPredicted RBP17.08■□□□□ 0.32
KCTD3-201ENST00000259154 SLC27A2O14975 620 aa17.08■□□□□ 0.32
KCTD3-201ENST00000259154 EIF5P55010 431 aaKnown RBP17.08■□□□□ 0.32
KCTD3-201ENST00000259154 CCDC144BQ3MJ40 725 aa17.08■□□□□ 0.32
KCTD3-201ENST00000259154 IBTKQ9P2D0 1353 aaPredicted RBP17.08■□□□□ 0.32
KCTD3-201ENST00000259154 ADKP55263 362 aaKnown RBP17.07■□□□□ 0.32
KCTD3-201ENST00000259154 TRMT44Q8IYL2 757 aaKnown RBP17.07■□□□□ 0.32
KCTD3-201ENST00000259154 SALL3Q9BXA9 1300 aa17.07■□□□□ 0.32
KCTD3-201ENST00000259154 ARHGEF10O15013 1369 aa17.07■□□□□ 0.32
KCTD3-201ENST00000259154 SSH2Q76I76 1423 aa17.07■□□□□ 0.32
KCTD3-201ENST00000259154 BCCIPQ9P287 314 aaKnown RBP eCLIP17.07■□□□□ 0.32
KCTD3-201ENST00000259154 TBX22Q9Y458 520 aa17.07■□□□□ 0.32
KCTD3-201ENST00000259154 CHGBP05060 677 aa17.07■□□□□ 0.32
KCTD3-201ENST00000259154 KMT5BQ4FZB7 885 aa17.07■□□□□ 0.32
KCTD3-201ENST00000259154 SPTLC2O15270 562 aa17.06■□□□□ 0.32
KCTD3-201ENST00000259154 PDIA4P13667 645 aaKnown RBP17.06■□□□□ 0.32
KCTD3-201ENST00000259154 SMC1AQ14683 1233 aaKnown RBP17.06■□□□□ 0.32
KCTD3-201ENST00000259154 TERF2Q15554 542 aa17.06■□□□□ 0.32
KCTD3-201ENST00000259154 LRRFIP1Q32MZ4 808 aaKnown RBP17.06■□□□□ 0.32
KCTD3-201ENST00000259154 TICAM2Q86XR7 235 aa17.06■□□□□ 0.32
KCTD3-201ENST00000259154 A0A087WZG4 1122 aa17.06■□□□□ 0.32
KCTD3-201ENST00000259154 E2F4Q16254 413 aa17.06■□□□□ 0.32
KCTD3-201ENST00000259154 SLC4A8Q2Y0W8 1093 aa17.06■□□□□ 0.32
KCTD3-201ENST00000259154 ZNF526Q8TF50 670 aaPredicted RBP17.06■□□□□ 0.32
KCTD3-201ENST00000259154 USP28Q96RU2 1077 aa17.06■□□□□ 0.32
KCTD3-201ENST00000259154 ZEB2O60315 1214 aa17.06■□□□□ 0.32
KCTD3-201ENST00000259154 CDR1P51861 262 aa17.06■□□□□ 0.32
KCTD3-201ENST00000259154 ZSCAN16Q9H4T2 348 aaPredicted RBP17.06■□□□□ 0.32
KCTD3-201ENST00000259154 JADE2Q9NQC1 790 aa17.05■□□□□ 0.32
KCTD3-201ENST00000259154 CEP126Q9P2H0 1117 aa17.05■□□□□ 0.32
KCTD3-201ENST00000259154 GUCA1BQ9UMX6 200 aa17.05■□□□□ 0.32
KCTD3-201ENST00000259154 KAT6BQ8WYB5 2073 aa17.05■□□□□ 0.32
KCTD3-201ENST00000259154 MAP3K5Q99683 1374 aa17.05■□□□□ 0.32
KCTD3-201ENST00000259154 SSBP05455 408 aaKnown RBP eCLIP17.05■□□□□ 0.32
KCTD3-201ENST00000259154 IMMTQ16891 758 aaKnown RBP17.05■□□□□ 0.32
KCTD3-201ENST00000259154 TAX1BP1Q86VP1 789 aa17.05■□□□□ 0.32
KCTD3-201ENST00000259154 DBF4Q9UBU7 674 aaPredicted RBP17.05■□□□□ 0.32
KCTD3-201ENST00000259154 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.05■□□□□ 0.32
KCTD3-201ENST00000259154 FAM170AA1A519 330 aa17.05■□□□□ 0.32
KCTD3-201ENST00000259154 WDHD1O75717 1129 aaPredicted RBP17.05■□□□□ 0.32
KCTD3-201ENST00000259154 CUL4AQ13619 759 aa17.05■□□□□ 0.32
KCTD3-201ENST00000259154 CCDC158Q5M9N0 1113 aa17.05■□□□□ 0.32
KCTD3-201ENST00000259154 FANCCQ00597 558 aa17.04■□□□□ 0.32
KCTD3-201ENST00000259154 HYPKQ9NX55 129 aa17.04■□□□□ 0.32
KCTD3-201ENST00000259154 KDRP35968 1356 aa17.04■□□□□ 0.32
KCTD3-201ENST00000259154 KIF24Q5T7B8 1368 aa17.04■□□□□ 0.32
KCTD3-201ENST00000259154 FMN2Q9NZ56 1722 aa17.04■□□□□ 0.32
KCTD3-201ENST00000259154 MTX1Q13505 466 aa17.04■□□□□ 0.32
KCTD3-201ENST00000259154 ZNF827Q17R98 1081 aa17.04■□□□□ 0.32
KCTD3-201ENST00000259154 TTC31Q49AM3 519 aaPredicted RBP17.04■□□□□ 0.32
KCTD3-201ENST00000259154 CCDC102BQ68D86 513 aa17.04■□□□□ 0.32
KCTD3-201ENST00000259154 TANGO6Q9C0B7 1094 aa17.04■□□□□ 0.32
KCTD3-201ENST00000259154 MAPK8IP1Q9UQF2 711 aa17.04■□□□□ 0.32
KCTD3-201ENST00000259154 STAMQ92783 540 aa17.04■□□□□ 0.32
KCTD3-201ENST00000259154 AMOTQ4VCS5 1084 aa17.03■□□□□ 0.32
KCTD3-201ENST00000259154 TRIM22Q8IYM9 498 aa17.03■□□□□ 0.32
KCTD3-201ENST00000259154 PSMB7Q99436 277 aa17.03■□□□□ 0.32
KCTD3-201ENST00000259154 SLC26A6Q9BXS9 759 aa17.03■□□□□ 0.32
KCTD3-201ENST00000259154 ZNHIT6Q9NWK9 470 aaKnown RBP17.03■□□□□ 0.32
KCTD3-201ENST00000259154 CTNNA3Q9UI47 895 aa17.03■□□□□ 0.32
KCTD3-201ENST00000259154 A0A0D9SFI3 127 aa17.03■□□□□ 0.32
KCTD3-201ENST00000259154 N4BP3O15049 544 aa17.03■□□□□ 0.32
KCTD3-201ENST00000259154 ERCC3P19447 782 aa17.03■□□□□ 0.32
KCTD3-201ENST00000259154 CNNM1Q9NRU3 951 aa17.03■□□□□ 0.32
KCTD3-201ENST00000259154 COBLO75128 1261 aa17.03■□□□□ 0.32
KCTD3-201ENST00000259154 EIF4A1P60842 406 aaKnown RBP17.03■□□□□ 0.32
KCTD3-201ENST00000259154 TIMM10P62072 90 aa17.03■□□□□ 0.32
KCTD3-201ENST00000259154 GIMAP7Q8NHV1 300 aa17.03■□□□□ 0.32
KCTD3-201ENST00000259154 OSBPL3Q9H4L5 887 aa17.03■□□□□ 0.32
KCTD3-201ENST00000259154 AXIN2Q9Y2T1 843 aa17.03■□□□□ 0.32
KCTD3-201ENST00000259154 CCT6AP40227 531 aaKnown RBP17.02■□□□□ 0.32
KCTD3-201ENST00000259154 CLCN6P51797 869 aa17.02■□□□□ 0.32
KCTD3-201ENST00000259154 GOLGA1Q92805 767 aa17.02■□□□□ 0.32
KCTD3-201ENST00000259154 MINDY4BA8MYZ0 360 aa17.02■□□□□ 0.32
KCTD3-201ENST00000259154 GCP02774 474 aa17.02■□□□□ 0.32
KCTD3-201ENST00000259154 FAM160A1Q05DH4 1040 aa17.02■□□□□ 0.32
KCTD3-201ENST00000259154 SAMD1Q6SPF0 538 aaPredicted RBP17.02■□□□□ 0.32
KCTD3-201ENST00000259154 EEF2KMTQ96G04 330 aa17.02■□□□□ 0.32
KCTD3-201ENST00000259154 ZBTB3Q9H5J0 574 aa17.02■□□□□ 0.32
KCTD3-201ENST00000259154 MAGEC2Q9UBF1 373 aaPredicted RBP17.02■□□□□ 0.32
KCTD3-201ENST00000259154 SHTN1A0MZ66 631 aa17.02■□□□□ 0.31
KCTD3-201ENST00000259154 IRX5P78411 483 aaPredicted RBP17.02■□□□□ 0.31
KCTD3-201ENST00000259154 PI4K2BQ8TCG2 481 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms