RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 CFAP74Q9C0B2 1584 aa5.29□□□□□ -1.56
VPS13C-201ENST00000249837 ATP5JP18859 108 aa5.29□□□□□ -1.56
VPS13C-201ENST00000249837 CCT6AP40227 531 aaKnown RBP5.29□□□□□ -1.56
VPS13C-201ENST00000249837 NAA16Q6N069 864 aaPredicted RBP5.29□□□□□ -1.56
VPS13C-201ENST00000249837 ZNF790Q6PG37 636 aa5.29□□□□□ -1.56
VPS13C-201ENST00000249837 C11orf57Q6ZUT1 292 aaPredicted RBP5.29□□□□□ -1.56
VPS13C-201ENST00000249837 TANGO6Q9C0B7 1094 aa5.29□□□□□ -1.56
VPS13C-201ENST00000249837 HOXB7P09629 217 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 ARID5BQ14865 1188 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 KBTBD3Q8NAB2 608 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 NSUN7Q8NE18 718 aaKnown RBP5.28□□□□□ -1.56
VPS13C-201ENST00000249837 A0A1B0GUL7 405 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 hCG_1642624A0A1W2PR95 340 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 PRAMEF22A3QJZ6 481 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 POLR2DO15514 142 aaKnown RBP5.28□□□□□ -1.56
VPS13C-201ENST00000249837 USP5P45974 858 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 NAA30Q147X3 362 aaPredicted RBP5.28□□□□□ -1.56
VPS13C-201ENST00000249837 PI4K2BQ8TCG2 481 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 MYL10Q9BUA6 226 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 CYP7A1P22680 504 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 NLRP12P59046 1061 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 PTPN21Q16825 1174 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 KIAA1524Q8TCG1 905 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 GPHNQ9NQX3 736 aaPredicted RBP5.28□□□□□ -1.56
VPS13C-201ENST00000249837 KCNH3Q9ULD8 1083 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 ZNF174Q15697 407 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 DDX17Q92841 729 aaKnown RBP5.28□□□□□ -1.56
VPS13C-201ENST00000249837 VAT1LQ9HCJ6 419 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 SLC4A4Q9Y6R1 1079 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 H0YHG0 523 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 RHOXF2BP0C7M4 288 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 UBA7P41226 1012 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.28□□□□□ -1.56
VPS13C-201ENST00000249837 DRC1Q96MC2 740 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 RHOXF2Q9BQY4 288 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 RRAGBQ5VZM2 374 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 GOLGA1Q92805 767 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 HELLSQ9NRZ9 838 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 TAF5LO75529 589 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 ADORA1P30542 326 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 ZNF589Q86UQ0 364 aaPredicted RBP5.28□□□□□ -1.56
VPS13C-201ENST00000249837 PPRC1Q5VV67 1664 aaKnown RBP5.28□□□□□ -1.56
VPS13C-201ENST00000249837 TRIM75PA6NK02 468 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 B4E1Z4 1266 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 E7EWF7 191 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 CYP2E1P05181 493 aaPredicted RBP5.28□□□□□ -1.56
VPS13C-201ENST00000249837 UQCRFS1P1P0C7P4 283 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 BRAPQ7Z569 592 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 CLIC6Q96NY7 704 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 UTP14AQ9BVJ6 771 aaKnown RBP5.28□□□□□ -1.56
VPS13C-201ENST00000249837 JAG2Q9Y219 1238 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 ELP1O95163 1332 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 FKBP15Q5T1M5 1219 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 IQCA1Q86XH1 822 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 TAF4BQ92750 862 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 CCDC43Q96MW1 224 aaKnown RBP5.28□□□□□ -1.56
VPS13C-201ENST00000249837 VPS18Q9P253 973 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 GOLGA8FQ08AF8 430 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 GOLGA8DPQ0D2H9 430 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 SLFNL1Q499Z3 407 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 AATKQ6ZMQ8 1374 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 SSH2Q76I76 1423 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 NEURL1BA8MQ27 555 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 EYA2O00167 538 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 SCRN1Q12765 414 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 MIGA1Q8NAN2 632 aa5.28□□□□□ -1.56
VPS13C-201ENST00000249837 KIAA1210Q9ULL0 1709 aa5.27□□□□□ -1.57
VPS13C-201ENST00000249837 POLA2Q14181 598 aa5.27□□□□□ -1.57
VPS13C-201ENST00000249837 RNF187Q5TA31 235 aaPredicted RBP5.27□□□□□ -1.57
VPS13C-201ENST00000249837 GPIHBP1Q8IV16 184 aa5.27□□□□□ -1.57
VPS13C-201ENST00000249837 TRMT44Q8IYL2 757 aaKnown RBP5.27□□□□□ -1.57
VPS13C-201ENST00000249837 MAGEB6Q8N7X4 407 aa5.27□□□□□ -1.57
VPS13C-201ENST00000249837 XAGE2Q96GT9 111 aa5.27□□□□□ -1.57
VPS13C-201ENST00000249837 DESI2Q9BSY9 194 aa5.27□□□□□ -1.57
VPS13C-201ENST00000249837 PPP2R3AQ06190 1150 aa5.27□□□□□ -1.57
VPS13C-201ENST00000249837 ERCC6LQ2NKX8 1250 aa5.27□□□□□ -1.57
VPS13C-201ENST00000249837 KRT40Q6A162 431 aa5.27□□□□□ -1.57
VPS13C-201ENST00000249837 TTLL7Q6ZT98 887 aa5.27□□□□□ -1.57
VPS13C-201ENST00000249837 KRI1Q8N9T8 703 aaKnown RBP5.27□□□□□ -1.57
VPS13C-201ENST00000249837 DBNLQ9UJU6 430 aaKnown RBP5.27□□□□□ -1.57
VPS13C-201ENST00000249837 YEATS4O95619 227 aa5.27□□□□□ -1.57
VPS13C-201ENST00000249837 CCDC178Q5BJE1 867 aa5.27□□□□□ -1.57
VPS13C-201ENST00000249837 ZCRB1Q8TBF4 217 aaKnown RBP5.27□□□□□ -1.57
VPS13C-201ENST00000249837 APPBP2Q92624 585 aa5.27□□□□□ -1.57
VPS13C-201ENST00000249837 SMARCC1Q92922 1105 aaPredicted RBP5.27□□□□□ -1.57
VPS13C-201ENST00000249837 ROBO2Q9HCK4 1378 aa5.27□□□□□ -1.57
VPS13C-201ENST00000249837 MED14O60244 1454 aa5.27□□□□□ -1.57
VPS13C-201ENST00000249837 GOLGA6L9A6NEM1 432 aa5.27□□□□□ -1.57
VPS13C-201ENST00000249837 IDEP14735 1019 aa5.27□□□□□ -1.57
VPS13C-201ENST00000249837 ATP7BP35670 1465 aa5.27□□□□□ -1.57
VPS13C-201ENST00000249837 ZNF569Q5MCW4 686 aa5.27□□□□□ -1.57
VPS13C-201ENST00000249837 MAPK8IP1Q9UQF2 711 aa5.27□□□□□ -1.57
VPS13C-201ENST00000249837 PFKFB2O60825 505 aa5.27□□□□□ -1.57
VPS13C-201ENST00000249837 CCDC191Q8NCU4 936 aa5.27□□□□□ -1.57
VPS13C-201ENST00000249837 ATL3Q6DD88 541 aa5.27□□□□□ -1.57
VPS13C-201ENST00000249837 STAMQ92783 540 aa5.27□□□□□ -1.57
VPS13C-201ENST00000249837 BAG1Q99933 345 aaPredicted RBP5.27□□□□□ -1.57
VPS13C-201ENST00000249837 CCDC194A0A1B0GVG4 234 aa5.27□□□□□ -1.57
VPS13C-201ENST00000249837 MBD4O95243 580 aa5.27□□□□□ -1.57
VPS13C-201ENST00000249837 TDRD7Q8NHU6 1098 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms