RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 FAM205AQ6ZU69 1335 aa17.08■□□□□ 0.32
SEC61B-201ENST00000223641 PPIP5K2O43314 1243 aa17.08■□□□□ 0.32
SEC61B-201ENST00000223641 IARSP41252 1262 aaKnown RBP17.08■□□□□ 0.32
SEC61B-201ENST00000223641 TICAM2Q86XR7 235 aa17.08■□□□□ 0.32
SEC61B-201ENST00000223641 EVI5LQ96CN4 794 aa17.08■□□□□ 0.32
SEC61B-201ENST00000223641 ZNF277Q9NRM2 450 aaPredicted RBP17.08■□□□□ 0.32
SEC61B-201ENST00000223641 PAG1Q9NWQ8 432 aa17.08■□□□□ 0.32
SEC61B-201ENST00000223641 IQSEC3Q9UPP2 1182 aaPredicted RBP17.08■□□□□ 0.32
SEC61B-201ENST00000223641 NDUFB9Q9Y6M9 179 aa17.08■□□□□ 0.32
SEC61B-201ENST00000223641 DICER1Q9UPY3 1922 aaKnown RBP17.08■□□□□ 0.32
SEC61B-201ENST00000223641 SALL1Q9NSC2 1324 aa17.07■□□□□ 0.32
SEC61B-201ENST00000223641 PRELPP51888 382 aa17.07■□□□□ 0.32
SEC61B-201ENST00000223641 DOK7Q18PE1 504 aa17.07■□□□□ 0.32
SEC61B-201ENST00000223641 CNTROBQ8N137 903 aa17.07■□□□□ 0.32
SEC61B-201ENST00000223641 EDC3Q96F86 508 aaKnown RBP17.07■□□□□ 0.32
SEC61B-201ENST00000223641 ANTXR1Q9H6X2 564 aa17.07■□□□□ 0.32
SEC61B-201ENST00000223641 SNRKQ9NRH2 765 aa17.07■□□□□ 0.32
SEC61B-201ENST00000223641 GOLIM4O00461 696 aa17.06■□□□□ 0.32
SEC61B-201ENST00000223641 MAP4K4O95819 1239 aaPredicted RBP17.06■□□□□ 0.32
SEC61B-201ENST00000223641 KBTBD3Q8NAB2 608 aa17.06■□□□□ 0.32
SEC61B-201ENST00000223641 DNAJC2Q99543 621 aaKnown RBP17.06■□□□□ 0.32
SEC61B-201ENST00000223641 MYH7P12883 1935 aa17.06■□□□□ 0.32
SEC61B-201ENST00000223641 YDJCA8MPS7 323 aa17.05■□□□□ 0.32
SEC61B-201ENST00000223641 TRIM6-TRIM34B2RNG4 842 aa17.05■□□□□ 0.32
SEC61B-201ENST00000223641 ECE2O60344 883 aa17.05■□□□□ 0.32
SEC61B-201ENST00000223641 IGSF3O75054 1194 aa17.05■□□□□ 0.32
SEC61B-201ENST00000223641 RASSF7Q02833 373 aa17.05■□□□□ 0.32
SEC61B-201ENST00000223641 TTF1Q15361 905 aaPredicted RBP17.05■□□□□ 0.32
SEC61B-201ENST00000223641 LARGE2Q8N3Y3 721 aa17.05■□□□□ 0.32
SEC61B-201ENST00000223641 WDR66Q8TBY9 1149 aa17.05■□□□□ 0.32
SEC61B-201ENST00000223641 DBNDD1Q9H9R9 158 aa17.05■□□□□ 0.32
SEC61B-201ENST00000223641 RFX7Q2KHR2 1363 aa17.04■□□□□ 0.32
SEC61B-201ENST00000223641 FRAT2O75474 233 aaPredicted RBP17.04■□□□□ 0.32
SEC61B-201ENST00000223641 ARHGAP27Q6ZUM4 889 aa17.04■□□□□ 0.32
SEC61B-201ENST00000223641 RILPL2Q969X0 211 aa17.04■□□□□ 0.32
SEC61B-201ENST00000223641 UTRNP46939 3433 aa17.03■□□□□ 0.32
SEC61B-201ENST00000223641 G3V3G9 751 aa17.03■□□□□ 0.32
SEC61B-201ENST00000223641 FKBP1AP62942 108 aaKnown RBP17.03■□□□□ 0.32
SEC61B-201ENST00000223641 DCAF8Q5TAQ9 597 aa17.03■□□□□ 0.32
SEC61B-201ENST00000223641 STRIP1Q5VSL9 837 aa17.03■□□□□ 0.32
SEC61B-201ENST00000223641 TBC1D9Q6ZT07 1266 aa17.03■□□□□ 0.32
SEC61B-201ENST00000223641 PIH1D3Q9NQM4 214 aaKnown RBP17.03■□□□□ 0.32
SEC61B-201ENST00000223641 KCNQ5Q9NR82 932 aa17.03■□□□□ 0.32
SEC61B-201ENST00000223641 ZNRF3Q9ULT6 936 aa17.03■□□□□ 0.32
SEC61B-201ENST00000223641 LMNB1P20700 586 aa17.02■□□□□ 0.32
SEC61B-201ENST00000223641 GTF2IP78347 998 aa17.02■□□□□ 0.32
SEC61B-201ENST00000223641 TTLL5Q6EMB2 1281 aa17.02■□□□□ 0.32
SEC61B-201ENST00000223641 ZGPATQ8N5A5 531 aaKnown RBP17.02■□□□□ 0.32
SEC61B-201ENST00000223641 TBC1D22AQ8WUA7 517 aa17.02■□□□□ 0.32
SEC61B-201ENST00000223641 FZD9O00144 591 aa17.01■□□□□ 0.31
SEC61B-201ENST00000223641 GRIN3BO60391 1043 aa17.01■□□□□ 0.31
SEC61B-201ENST00000223641 CHAF1AQ13111 956 aaPredicted RBP17.01■□□□□ 0.31
SEC61B-201ENST00000223641 DACT2Q5SW24 774 aa17.01■□□□□ 0.31
SEC61B-201ENST00000223641 NIM1KQ8IY84 436 aa17.01■□□□□ 0.31
SEC61B-201ENST00000223641 FSD1Q9BTV5 496 aa17.01■□□□□ 0.31
SEC61B-201ENST00000223641 SUGT1Q9Y2Z0 365 aa17.01■□□□□ 0.31
SEC61B-201ENST00000223641 MAST2Q6P0Q8 1798 aa17■□□□□ 0.31
SEC61B-201ENST00000223641 USP17L3A6NCW0 530 aa17■□□□□ 0.31
SEC61B-201ENST00000223641 USP17L4A6NCW7 530 aa17■□□□□ 0.31
SEC61B-201ENST00000223641 CDC45O75419 566 aa17■□□□□ 0.31
SEC61B-201ENST00000223641 CHMLP26374 656 aa17■□□□□ 0.31
SEC61B-201ENST00000223641 GPR162Q16538 588 aa17■□□□□ 0.31
SEC61B-201ENST00000223641 TMED8Q6PL24 325 aaPredicted RBP17■□□□□ 0.31
SEC61B-201ENST00000223641 USP17L1Q7RTZ2 530 aa17■□□□□ 0.31
SEC61B-201ENST00000223641 PELP1Q8IZL8 1130 aaKnown RBP17■□□□□ 0.31
SEC61B-201ENST00000223641 JDP2Q8WYK2 163 aa17■□□□□ 0.31
SEC61B-201ENST00000223641 HIP1O00291 1037 aa16.99■□□□□ 0.31
SEC61B-201ENST00000223641 ZFYP08048 801 aaPredicted RBP16.99■□□□□ 0.31
SEC61B-201ENST00000223641 VIL1P09327 827 aaKnown RBP16.99■□□□□ 0.31
SEC61B-201ENST00000223641 PRDX5P30044 214 aa16.99■□□□□ 0.31
SEC61B-201ENST00000223641 ADD2P35612 726 aa16.99■□□□□ 0.31
SEC61B-201ENST00000223641 MAP3K12Q12852 859 aa16.99■□□□□ 0.31
SEC61B-201ENST00000223641 GRIK5Q16478 980 aa16.99■□□□□ 0.31
SEC61B-201ENST00000223641 LRRFIP1Q32MZ4 808 aaKnown RBP16.99■□□□□ 0.31
SEC61B-201ENST00000223641 C8orf34Q49A92 452 aa16.99■□□□□ 0.31
SEC61B-201ENST00000223641 MFSD14BQ5SR56 506 aa16.99■□□□□ 0.31
SEC61B-201ENST00000223641 SPTY2D1Q68D10 685 aaPredicted RBP16.99■□□□□ 0.31
SEC61B-201ENST00000223641 ZSCAN25Q6NSZ9 544 aa16.99■□□□□ 0.31
SEC61B-201ENST00000223641 CERS5Q8N5B7 392 aa16.99■□□□□ 0.31
SEC61B-201ENST00000223641 ZNF384Q8TF68 577 aa16.99■□□□□ 0.31
SEC61B-201ENST00000223641 LRP2BPQ9P2M1 347 aa16.99■□□□□ 0.31
SEC61B-201ENST00000223641 ABCF2Q9UG63 623 aa16.99■□□□□ 0.31
SEC61B-201ENST00000223641 JAG2Q9Y219 1238 aa16.99■□□□□ 0.31
SEC61B-201ENST00000223641 TCRBV5S4A2TA0A5A2 114 aa16.98■□□□□ 0.31
SEC61B-201ENST00000223641 IDH1O75874 414 aaKnown RBP16.98■□□□□ 0.31
SEC61B-201ENST00000223641 CXCL9Q07325 125 aa16.98■□□□□ 0.31
SEC61B-201ENST00000223641 UBE3CQ15386 1083 aa16.98■□□□□ 0.31
SEC61B-201ENST00000223641 ERICH6Q7L0X2 663 aa16.98■□□□□ 0.31
SEC61B-201ENST00000223641 NSUN4Q96CB9 384 aaKnown RBP16.98■□□□□ 0.31
SEC61B-201ENST00000223641 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.98■□□□□ 0.31
SEC61B-201ENST00000223641 RNF113AO15541 343 aaKnown RBP16.97■□□□□ 0.31
SEC61B-201ENST00000223641 CHGBP05060 677 aa16.97■□□□□ 0.31
SEC61B-201ENST00000223641 ZMYM1Q5SVZ6 1142 aa16.97■□□□□ 0.31
SEC61B-201ENST00000223641 SLC9C2Q5TAH2 1124 aa16.97■□□□□ 0.31
SEC61B-201ENST00000223641 GMLQ99445 158 aa16.97■□□□□ 0.31
SEC61B-201ENST00000223641 MYO3BQ8WXR4 1341 aa16.96■□□□□ 0.31
SEC61B-201ENST00000223641 TIAM2Q8IVF5 1701 aa16.96■□□□□ 0.31
SEC61B-201ENST00000223641 PSMD14O00487 310 aa16.96■□□□□ 0.31
SEC61B-201ENST00000223641 LDHBP07195 334 aaKnown RBP16.96■□□□□ 0.31
SEC61B-201ENST00000223641 PDE6AP16499 860 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms