RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 ZNF92Q03936 586 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 TMEM267Q0VDI3 215 aaPredicted RBP5.28□□□□□ -1.56
SMAD4-203ENST00000585448 LTC4SQ16873 150 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 SLC25A52Q3SY17 297 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 CCSMST1Q4G0I0 132 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 SPATA45Q537H7 98 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 TP53I3Q53FA7 332 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 C5orf47Q569G3 176 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 Q6ZWC4 215 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 NEGR1Q7Z3B1 354 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 IQCF1Q8N6M8 205 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 TMEM217Q8N7C4 229 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 ZNF709Q8N972 641 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 C5orf17Q8NAS9 161 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 NPEPL1Q8NDH3 523 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 CMTM2Q8TAZ6 248 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 UBTD2Q8WUN7 234 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 DDIT4LQ96D03 193 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 ZMYND19Q96E35 227 aaPredicted RBP5.28□□□□□ -1.56
SMAD4-203ENST00000585448 SMIM10Q96HG1 83 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 PGLYRP3Q96LB9 341 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 C2orf50Q96LR7 162 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 OR6C1Q96RD1 312 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 MYADMQ96S97 322 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 NUDT9Q9BW91 350 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 GPR174Q9BXC1 333 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 NMNAT2Q9BZQ4 307 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 OR51I1Q9H343 314 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 MMP25Q9NPA2 562 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 PXMP2Q9NR77 195 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 SLC7A10Q9NS82 523 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 FBXL17Q9UF56 701 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 MRPS28Q9Y2Q9 187 aaKnown RBP5.28□□□□□ -1.56
SMAD4-203ENST00000585448 UBE2J1Q9Y385 318 aaPredicted RBP5.28□□□□□ -1.56
SMAD4-203ENST00000585448 WDR45Q9Y484 360 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 SIRT4Q9Y6E7 314 aaPredicted RBP5.28□□□□□ -1.56
SMAD4-203ENST00000585448 WNT6Q9Y6F9 365 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 WSB1Q9Y6I7 421 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 STRCQ7RTU9 1775 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 NRXN2Q9P2S2 1712 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 ROBO1Q9Y6N7 1651 aa5.28□□□□□ -1.56
SMAD4-203ENST00000585448 C13orf42A0A1B0GVH6 325 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 TMEM150BA6NC51 233 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 SERINC4A6NH21 518 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 SIRPB1O00241 398 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 CD5LO43866 347 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 CDS2O95674 445 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 REG1AP05451 166 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 PNMTP11086 282 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 ERGP11308 486 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 TNFRSF1BP20333 461 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 PSMB5P28074 263 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 AQP1P29972 269 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 SRP14P37108 136 aaKnown RBP5.27□□□□□ -1.57
SMAD4-203ENST00000585448 GUCA1AP43080 201 aaPredicted RBP5.27□□□□□ -1.57
SMAD4-203ENST00000585448 ARRB1P49407 418 aaPredicted RBP5.27□□□□□ -1.57
SMAD4-203ENST00000585448 LCN2P80188 198 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 ZXDBP98169 803 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 RUNX1Q01196 453 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 HMGCS1Q01581 520 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 HSD52Q0P140 79 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 GAGE5Q13069 117 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 GAGE6Q13070 117 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 P2RY6Q15077 328 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 ELOCQ15369 112 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 PMCHL1Q16048 86 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 GGTA1PQ4G0N0 100 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 C9orf50Q5SZB4 431 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 FAM27D1Q5T7N8 215 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 INO80CQ6PI98 192 aaPredicted RBP5.27□□□□□ -1.57
SMAD4-203ENST00000585448 DPPA3Q6W0C5 159 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 RNF44Q7L0R7 432 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 MEPCEQ7L2J0 689 aaKnown RBP5.27□□□□□ -1.57
SMAD4-203ENST00000585448 MDGA2Q7Z553 956 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 CENPVQ7Z7K6 275 aaPredicted RBP5.27□□□□□ -1.57
SMAD4-203ENST00000585448 TMPRSS12Q86WS5 348 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 OR8I2Q8N0Y5 310 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 LGI3Q8N145 548 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 SYS1Q8N2H4 156 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 MUC15Q8N387 334 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 OR10S1Q8NGN2 331 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 OR1B1Q8NGR6 318 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 OR10X1Q8NGY0 326 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 NFKBIDQ8NI38 313 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 ADAMTS15Q8TE58 950 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 STARD4Q96DR4 205 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 SCGB3A2Q96PL1 93 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 ABCA3Q99758 1704 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 TMEM39BQ9GZU3 492 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 ISG20L2Q9H9L3 353 aaKnown RBP5.27□□□□□ -1.57
SMAD4-203ENST00000585448 NGBQ9NPG2 151 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 OSER1Q9NX31 292 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 OR5V1Q9UGF6 321 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 SLC13A4Q9UKG4 626 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 TRAPPC2LQ9UL33 140 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 MMP17Q9ULZ9 603 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 PARP14Q460N5 1801 aa5.27□□□□□ -1.57
SMAD4-203ENST00000585448 TRAV25A0A0B4J276 109 aa5.26□□□□□ -1.57
SMAD4-203ENST00000585448 TSPAN11A1L157 253 aa5.26□□□□□ -1.57
SMAD4-203ENST00000585448 HELTA6NFD8 242 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms