RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 TMEM56-RWDD3S4R434 201 aa15.16■□□□□ 0.02
SYNE3-202ENST00000553340 CABIN1Q9Y6J0 2220 aa15.16■□□□□ 0.02
SYNE3-202ENST00000553340 CXorf65A6NEN9 183 aa15.16■□□□□ 0.02
SYNE3-202ENST00000553340 IFITM10A6NMD0 228 aa15.16■□□□□ 0.02
SYNE3-202ENST00000553340 ZNF732B4DXR9 585 aa15.16■□□□□ 0.02
SYNE3-202ENST00000553340 PROB1E7EW31 1015 aa15.16■□□□□ 0.02
SYNE3-202ENST00000553340 SCAF4O95104 1147 aaKnown RBP15.16■□□□□ 0.02
SYNE3-202ENST00000553340 SLC34A2O95436 690 aa15.16■□□□□ 0.02
SYNE3-202ENST00000553340 FUT3P21217 361 aa15.16■□□□□ 0.02
SYNE3-202ENST00000553340 EXT1Q16394 746 aa15.16■□□□□ 0.02
SYNE3-202ENST00000553340 PYY3Q5JQD4 70 aa15.16■□□□□ 0.02
SYNE3-202ENST00000553340 Q6ZPA2 131 aa15.16■□□□□ 0.02
SYNE3-202ENST00000553340 GPR137CQ8N3F9 429 aa15.16■□□□□ 0.02
SYNE3-202ENST00000553340 TVP23CQ96ET8 276 aa15.16■□□□□ 0.02
SYNE3-202ENST00000553340 MAGT1Q9H0U3 335 aa15.16■□□□□ 0.02
SYNE3-202ENST00000553340 SIRT7Q9NRC8 400 aa15.16■□□□□ 0.02
SYNE3-202ENST00000553340 TREM2Q9NZC2 230 aa15.16■□□□□ 0.02
SYNE3-202ENST00000553340 WSB1Q9Y6I7 421 aa15.16■□□□□ 0.02
SYNE3-202ENST00000553340 GNRHRP30968 328 aa15.15■□□□□ 0.02
SYNE3-202ENST00000553340 RGS19P49795 217 aa15.15■□□□□ 0.02
SYNE3-202ENST00000553340 RBM11P57052 281 aaKnown RBP15.15■□□□□ 0.02
SYNE3-202ENST00000553340 ICAM4Q14773 271 aa15.15■□□□□ 0.02
SYNE3-202ENST00000553340 SPIN3Q5JUX0 258 aa15.15■□□□□ 0.02
SYNE3-202ENST00000553340 ZNF385CQ66K41 422 aaPredicted RBP15.15■□□□□ 0.02
SYNE3-202ENST00000553340 ZNF343Q6P1L6 599 aa15.15■□□□□ 0.02
SYNE3-202ENST00000553340 TBC1D26Q86UD7 250 aa15.15■□□□□ 0.02
SYNE3-202ENST00000553340 CYB561D1Q8N8Q1 229 aa15.15■□□□□ 0.02
SYNE3-202ENST00000553340 FAM86C1Q9NVL1 165 aa15.15■□□□□ 0.02
SYNE3-202ENST00000553340 PARPBPQ9NWS1 579 aa15.15■□□□□ 0.02
SYNE3-202ENST00000553340 TCFL5Q9UL49 500 aa15.15■□□□□ 0.02
SYNE3-202ENST00000553340 CST2P09228 141 aa15.15■□□□□ 0.02
SYNE3-202ENST00000553340 CXCL1P09341 107 aa15.15■□□□□ 0.02
SYNE3-202ENST00000553340 RD3LP0DJH9 198 aa15.15■□□□□ 0.02
SYNE3-202ENST00000553340 DYNLT3P51808 116 aa15.15■□□□□ 0.02
SYNE3-202ENST00000553340 CXorf66Q5JRM2 361 aaPredicted RBP15.15■□□□□ 0.02
SYNE3-202ENST00000553340 ZNF506Q5JVG8 444 aa15.15■□□□□ 0.02
SYNE3-202ENST00000553340 AKR1C8PQ5T2L2 129 aa15.15■□□□□ 0.02
SYNE3-202ENST00000553340 RBMXL1Q96E39 390 aaKnown RBP15.15■□□□□ 0.02
SYNE3-202ENST00000553340 JSRP1Q96MG2 331 aaPredicted RBP15.15■□□□□ 0.02
SYNE3-202ENST00000553340 PFDN5Q99471 154 aa15.15■□□□□ 0.02
SYNE3-202ENST00000553340 OPA3Q9H6K4 179 aa15.15■□□□□ 0.02
SYNE3-202ENST00000553340 GLRX2Q9NS18 164 aa15.15■□□□□ 0.02
SYNE3-202ENST00000553340 ZNF391Q9UJN7 358 aa15.15■□□□□ 0.02
SYNE3-202ENST00000553340 URGCP-MRPS24S4R325 110 aa15.15■□□□□ 0.02
SYNE3-202ENST00000553340 OR7C1O76099 320 aaPredicted RBP15.14■□□□□ 0.01
SYNE3-202ENST00000553340 DSCR4P56555 118 aaPredicted RBP15.14■□□□□ 0.01
SYNE3-202ENST00000553340 TLE4Q04727 773 aa15.14■□□□□ 0.01
SYNE3-202ENST00000553340 BAXQ07812 192 aa15.14■□□□□ 0.01
SYNE3-202ENST00000553340 WDR5BQ86VZ2 330 aa15.14■□□□□ 0.01
SYNE3-202ENST00000553340 SELENOHQ8IZQ5 122 aaKnown RBP15.14■□□□□ 0.01
SYNE3-202ENST00000553340 SLC7A10Q9NS82 523 aa15.14■□□□□ 0.01
SYNE3-202ENST00000553340 TRIOO75962 3097 aa15.14■□□□□ 0.01
SYNE3-202ENST00000553340 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.14■□□□□ 0.01
SYNE3-202ENST00000553340 ADAM20O43506 726 aa15.14■□□□□ 0.01
SYNE3-202ENST00000553340 CST7O76096 145 aa15.14■□□□□ 0.01
SYNE3-202ENST00000553340 PLCXD3Q63HM9 321 aa15.14■□□□□ 0.01
SYNE3-202ENST00000553340 SP5Q6BEB4 398 aaPredicted RBP15.14■□□□□ 0.01
SYNE3-202ENST00000553340 DKKL1Q9UK85 242 aa15.14■□□□□ 0.01
SYNE3-202ENST00000553340 TNFSF11O14788 317 aa15.13■□□□□ 0.01
SYNE3-202ENST00000553340 ZIC3O60481 467 aa15.13■□□□□ 0.01
SYNE3-202ENST00000553340 HBE1P02100 147 aa15.13■□□□□ 0.01
SYNE3-202ENST00000553340 LIFP15018 202 aa15.13■□□□□ 0.01
SYNE3-202ENST00000553340 ERVFRD-1P60508 538 aa15.13■□□□□ 0.01
SYNE3-202ENST00000553340 ZNF600Q6ZNG1 722 aa15.13■□□□□ 0.01
SYNE3-202ENST00000553340 TMEM217Q8N7C4 229 aa15.13■□□□□ 0.01
SYNE3-202ENST00000553340 CRLF2Q9HC73 371 aa15.13■□□□□ 0.01
SYNE3-202ENST00000553340 P4HTMQ9NXG6 502 aa15.13■□□□□ 0.01
SYNE3-202ENST00000553340 NOSIPQ9Y314 301 aaKnown RBP15.13■□□□□ 0.01
SYNE3-202ENST00000553340 OR6C6A6NF89 314 aa15.13■□□□□ 0.01
SYNE3-202ENST00000553340 SEC14L6B5MCN3 397 aa15.13■□□□□ 0.01
SYNE3-202ENST00000553340 MMP9P14780 707 aa15.13■□□□□ 0.01
SYNE3-202ENST00000553340 ZNF32P17041 273 aa15.13■□□□□ 0.01
SYNE3-202ENST00000553340 SLC35E3Q7Z769 313 aa15.13■□□□□ 0.01
SYNE3-202ENST00000553340 IL22RA1Q8N6P7 574 aa15.13■□□□□ 0.01
SYNE3-202ENST00000553340 PIGCQ92535 297 aa15.13■□□□□ 0.01
SYNE3-202ENST00000553340 CPNE4Q96A23 557 aaPredicted RBP15.13■□□□□ 0.01
SYNE3-202ENST00000553340 TMEM38BQ9NVV0 291 aa15.13■□□□□ 0.01
SYNE3-202ENST00000553340 MYO15AQ9UKN7 3530 aa15.13■□□□□ 0.01
SYNE3-202ENST00000553340 SDK1Q7Z5N4 2213 aa15.13■□□□□ 0.01
SYNE3-202ENST00000553340 A0A0J9YW62 118 aa15.13■□□□□ 0.01
SYNE3-202ENST00000553340 hCG_38984A0A1B0GV85 526 aa15.13■□□□□ 0.01
SYNE3-202ENST00000553340 DUXBA0A1W2PPF3 345 aa15.13■□□□□ 0.01
SYNE3-202ENST00000553340 TK1P04183 234 aa15.13■□□□□ 0.01
SYNE3-202ENST00000553340 GLIPR1P48060 266 aa15.13■□□□□ 0.01
SYNE3-202ENST00000553340 RPL23AP62750 156 aaKnown RBP15.13■□□□□ 0.01
SYNE3-202ENST00000553340 RUNX1Q01196 453 aa15.13■□□□□ 0.01
SYNE3-202ENST00000553340 C9orf152Q5JTZ5 239 aa15.13■□□□□ 0.01
SYNE3-202ENST00000553340 CLDND2Q8NHS1 167 aa15.13■□□□□ 0.01
SYNE3-202ENST00000553340 TGIF2-C20orf24A0A0A6YYL0 155 aa15.12■□□□□ 0.01
SYNE3-202ENST00000553340 BCAT2O15382 392 aaPredicted RBP15.12■□□□□ 0.01
SYNE3-202ENST00000553340 CYB5BO43169 146 aa15.12■□□□□ 0.01
SYNE3-202ENST00000553340 HIST1H2BKO60814 126 aa15.12■□□□□ 0.01
SYNE3-202ENST00000553340 HIST1H2BJP06899 126 aa15.12■□□□□ 0.01
SYNE3-202ENST00000553340 CCL3P10147 92 aa15.12■□□□□ 0.01
SYNE3-202ENST00000553340 CEACAM1P13688 526 aa15.12■□□□□ 0.01
SYNE3-202ENST00000553340 HIST1H2BOP23527 126 aa15.12■□□□□ 0.01
SYNE3-202ENST00000553340 HIST1H2BBP33778 126 aa15.12■□□□□ 0.01
SYNE3-202ENST00000553340 HIST1H2BDP58876 126 aa15.12■□□□□ 0.01
SYNE3-202ENST00000553340 HIST1H2BCP62807 126 aa15.12■□□□□ 0.01
SYNE3-202ENST00000553340 ID3Q02535 119 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms