RNA–Protein interactions for RNA: ENST00000547281.5

CDK4-204, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-204ENST00000547281 SIRPB1O00241 398 aa13.12□□□□□ -0.31
CDK4-204ENST00000547281 ZNF737O75373 536 aa13.12□□□□□ -0.31
CDK4-204ENST00000547281 KDM4BO94953 1096 aa13.12□□□□□ -0.31
CDK4-204ENST00000547281 ALX3O95076 343 aa13.12□□□□□ -0.31
CDK4-204ENST00000547281 TSPAN15O95858 294 aa13.12□□□□□ -0.31
CDK4-204ENST00000547281 CDK1P06493 297 aa13.12□□□□□ -0.31
CDK4-204ENST00000547281 CSF1P09603 554 aa13.12□□□□□ -0.31
CDK4-204ENST00000547281 CELP19835 753 aa13.12□□□□□ -0.31
CDK4-204ENST00000547281 RAB13P51153 203 aa13.12□□□□□ -0.31
CDK4-204ENST00000547281 TAS2R43P59537 309 aa13.12□□□□□ -0.31
CDK4-204ENST00000547281 PPP3R1P63098 170 aa13.12□□□□□ -0.31
CDK4-204ENST00000547281 SCN1BQ07699 218 aa13.12□□□□□ -0.31
CDK4-204ENST00000547281 FAM189A2Q15884 450 aa13.12□□□□□ -0.31
CDK4-204ENST00000547281 C11orf88Q6PI97 169 aa13.12□□□□□ -0.31
CDK4-204ENST00000547281 CRIP3Q6Q6R5 217 aa13.12□□□□□ -0.31
CDK4-204ENST00000547281 OR8H2Q8N162 312 aa13.12□□□□□ -0.31
CDK4-204ENST00000547281 NANOGP1Q8N7R0 232 aa13.12□□□□□ -0.31
CDK4-204ENST00000547281 OR52N4Q8NGI2 321 aa13.12□□□□□ -0.31
CDK4-204ENST00000547281 TNFAIP8L1Q8WVP5 186 aa13.12□□□□□ -0.31
CDK4-204ENST00000547281 SGCDQ92629 289 aa13.12□□□□□ -0.31
CDK4-204ENST00000547281 MYDGFQ969H8 173 aa13.12□□□□□ -0.31
CDK4-204ENST00000547281 CPNE2Q96FN4 548 aaPredicted RBP13.12□□□□□ -0.31
CDK4-204ENST00000547281 NPFFR1Q9GZQ6 430 aa13.12□□□□□ -0.31
CDK4-204ENST00000547281 PCDHGB5Q9Y5G0 923 aa13.12□□□□□ -0.31
CDK4-204ENST00000547281 A0A1W2PPK0 400 aa13.11□□□□□ -0.31
CDK4-204ENST00000547281 hADV38S2A0JD32 116 aa13.11□□□□□ -0.31
CDK4-204ENST00000547281 SH2D1BO14796 132 aa13.11□□□□□ -0.31
CDK4-204ENST00000547281 ATP6V1G2O95670 118 aa13.11□□□□□ -0.31
CDK4-204ENST00000547281 MYF6P23409 242 aa13.11□□□□□ -0.31
CDK4-204ENST00000547281 DLX6P56179 175 aa13.11□□□□□ -0.31
CDK4-204ENST00000547281 ZP1P60852 638 aa13.11□□□□□ -0.31
CDK4-204ENST00000547281 MEF2CQ06413 473 aaPredicted RBP13.11□□□□□ -0.31
CDK4-204ENST00000547281 DOC2BQ14184 412 aa13.11□□□□□ -0.31
CDK4-204ENST00000547281 HERPUD1Q15011 391 aa13.11□□□□□ -0.31
CDK4-204ENST00000547281 GRK1Q15835 563 aa13.11□□□□□ -0.31
CDK4-204ENST00000547281 SSX2Q16385 188 aa13.11□□□□□ -0.31
CDK4-204ENST00000547281 YIF1BQ5BJH7 314 aa13.11□□□□□ -0.31
CDK4-204ENST00000547281 SPIN3Q5JUX0 258 aa13.11□□□□□ -0.31
CDK4-204ENST00000547281 ZNF529Q6P280 563 aa13.11□□□□□ -0.31
CDK4-204ENST00000547281 LIAT1Q6ZQX7 453 aa13.11□□□□□ -0.31
CDK4-204ENST00000547281 SAXO1Q8IYX7 474 aa13.11□□□□□ -0.31
CDK4-204ENST00000547281 C11orf44Q8N8P7 122 aa13.11□□□□□ -0.31
CDK4-204ENST00000547281 MALSU1Q96EH3 234 aa13.11□□□□□ -0.31
CDK4-204ENST00000547281 PGLYRP3Q96LB9 341 aa13.11□□□□□ -0.31
CDK4-204ENST00000547281 ZNF714Q96N38 554 aa13.11□□□□□ -0.31
CDK4-204ENST00000547281 EXOSC4Q9NPD3 245 aaKnown RBP13.11□□□□□ -0.31
CDK4-204ENST00000547281 PAK1IP1Q9NWT1 392 aaPredicted RBP13.11□□□□□ -0.31
CDK4-204ENST00000547281 FOXJ3Q9UPW0 622 aa13.11□□□□□ -0.31
CDK4-204ENST00000547281 CMYA5Q8N3K9 4069 aa13.11□□□□□ -0.31
CDK4-204ENST00000547281 TRBV5-5A0A0J9YX44 114 aa13.1□□□□□ -0.31
CDK4-204ENST00000547281 FAM90A8PA6NJQ4 464 aa13.1□□□□□ -0.31
CDK4-204ENST00000547281 GABRPO00591 440 aa13.1□□□□□ -0.31
CDK4-204ENST00000547281 RBP4P02753 201 aa13.1□□□□□ -0.31
CDK4-204ENST00000547281 IGHV1-8P0DP01 117 aa13.1□□□□□ -0.31
CDK4-204ENST00000547281 VSIG10L2P0DP72 767 aa13.1□□□□□ -0.31
CDK4-204ENST00000547281 HSPA13P48723 471 aa13.1□□□□□ -0.31
CDK4-204ENST00000547281 EFNB2P52799 333 aa13.1□□□□□ -0.31
CDK4-204ENST00000547281 RPS11P62280 158 aaKnown RBP eCLIP13.1□□□□□ -0.31
CDK4-204ENST00000547281 ZNF146Q15072 292 aa13.1□□□□□ -0.31
CDK4-204ENST00000547281 Q499Y3 187 aa13.1□□□□□ -0.31
CDK4-204ENST00000547281 DDI2Q5TDH0 399 aa13.1□□□□□ -0.31
CDK4-204ENST00000547281 TPRX1Q8N7U7 411 aa13.1□□□□□ -0.31
CDK4-204ENST00000547281 OR4S1Q8NGB4 309 aa13.1□□□□□ -0.31
CDK4-204ENST00000547281 PIFOQ8TCI5 191 aa13.1□□□□□ -0.31
CDK4-204ENST00000547281 FOXRED1Q96CU9 486 aaPredicted RBP13.1□□□□□ -0.31
CDK4-204ENST00000547281 OR14A2Q96R54 314 aa13.1□□□□□ -0.31
CDK4-204ENST00000547281 NR1H4Q96RI1 486 aaPredicted RBP13.1□□□□□ -0.31
CDK4-204ENST00000547281 MND1Q9BWT6 205 aa13.1□□□□□ -0.31
CDK4-204ENST00000547281 ANKRD60Q9BZ19 345 aa13.1□□□□□ -0.31
CDK4-204ENST00000547281 RANBP3Q9H6Z4 567 aaPredicted RBP13.1□□□□□ -0.31
CDK4-204ENST00000547281 TMEM138Q9NPI0 162 aa13.1□□□□□ -0.31
CDK4-204ENST00000547281 CKLFQ9UBR5 152 aa13.1□□□□□ -0.31
CDK4-204ENST00000547281 TPRKBQ9Y3C4 175 aa13.1□□□□□ -0.31
CDK4-204ENST00000547281 TBL2Q9Y4P3 447 aaKnown RBP13.1□□□□□ -0.31
CDK4-204ENST00000547281 NOTCH1P46531 2555 aa13.1□□□□□ -0.31
CDK4-204ENST00000547281 VGLL3A8MV65 326 aa13.09□□□□□ -0.31
CDK4-204ENST00000547281 PSPNO60542 156 aa13.09□□□□□ -0.31
CDK4-204ENST00000547281 OR2H2O95918 312 aa13.09□□□□□ -0.31
CDK4-204ENST00000547281 ZNF44P15621 663 aa13.09□□□□□ -0.31
CDK4-204ENST00000547281 BDKRB2P30411 391 aa13.09□□□□□ -0.31
CDK4-204ENST00000547281 OR3A4PP47883 348 aa13.09□□□□□ -0.31
CDK4-204ENST00000547281 RIPK1Q13546 671 aa13.09□□□□□ -0.31
CDK4-204ENST00000547281 RSU1Q15404 277 aa13.09□□□□□ -0.31
CDK4-204ENST00000547281 TRAPPC6BQ86SZ2 158 aa13.09□□□□□ -0.31
CDK4-204ENST00000547281 DYNAPQ8N1N2 210 aa13.09□□□□□ -0.31
CDK4-204ENST00000547281 KLHDC1Q8N7A1 406 aa13.09□□□□□ -0.31
CDK4-204ENST00000547281 OR11H6Q8NGC7 330 aa13.09□□□□□ -0.31
CDK4-204ENST00000547281 OR10K1Q8NGX5 313 aa13.09□□□□□ -0.31
CDK4-204ENST00000547281 CNBD2Q96M20 576 aa13.09□□□□□ -0.31
CDK4-204ENST00000547281 SEBOXQ9HB31 216 aaPredicted RBP13.09□□□□□ -0.31
CDK4-204ENST00000547281 RHOFQ9HBH0 211 aa13.09□□□□□ -0.31
CDK4-204ENST00000547281 ING3Q9NXR8 418 aa13.09□□□□□ -0.31
CDK4-204ENST00000547281 PITPNC1Q9UKF7 332 aa13.09□□□□□ -0.31
CDK4-204ENST00000547281 ING4Q9UNL4 249 aa13.09□□□□□ -0.31
CDK4-204ENST00000547281 HILPDAQ9Y5L2 63 aa13.09□□□□□ -0.31
CDK4-204ENST00000547281 TRAV8-7A0A075B6U6 113 aa13.08□□□□□ -0.32
CDK4-204ENST00000547281 H3BUI4 141 aa13.08□□□□□ -0.32
CDK4-204ENST00000547281 DEGS1O15121 323 aa13.08□□□□□ -0.32
CDK4-204ENST00000547281 CHST1O43916 411 aa13.08□□□□□ -0.32
CDK4-204ENST00000547281 CDRT1O95170 752 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms