RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 BCORP1Q8N888 145 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 OR5D14Q8NGL3 314 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 OR5H2Q8NGV7 314 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 NTNG2Q96CW9 530 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 KTI12Q96EK9 354 aaPredicted RBP4.6□□□□□ -1.67
PROM1-220ENST00000540805 OR10C1Q96KK4 312 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 ALKBH3Q96Q83 286 aaPredicted RBP4.6□□□□□ -1.67
PROM1-220ENST00000540805 DIRC2Q96SL1 478 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 WWTR1Q9GZV5 400 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 C5orf66Q9H5L9 145 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 CNTD2Q9H8S5 307 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 FBXL17Q9UF56 701 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 STARD10Q9Y365 291 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 R4GMQ9 66 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 GTF3C1Q12789 2109 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 IGHV1OR21-1A0A087WYE8 117 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 TGIF2-C20orf24A0A0A6YYL0 155 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 K7EPK0 472 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 TNFSF14O43557 240 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 NME2P1O60361 137 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 TRGC2P03986 189 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 FCGR2AP12318 317 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 RPL12P30050 165 aaKnown RBP4.6□□□□□ -1.67
PROM1-220ENST00000540805 CDX1P47902 265 aaPredicted RBP4.6□□□□□ -1.67
PROM1-220ENST00000540805 EGR4Q05215 589 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 UNC119Q13432 240 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 SPATA46Q5T0L3 261 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 FAM71E2Q8N5Q1 922 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 OR10AD1Q8NGE0 317 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 LYPD6BQ8NI32 183 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 SCGB1C1Q8TD33 95 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 C2orf88Q9BSF0 95 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 ABHD6Q9BV23 337 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 ELOVL1Q9BW60 279 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 FAM60AQ9NP50 221 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 GCM1Q9NP62 436 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 KCNJ16Q9NPI9 418 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 OR52A1Q9UKL2 312 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 TRAPPC2LQ9UL33 140 aa4.6□□□□□ -1.67
PROM1-220ENST00000540805 COA3Q9Y2R0 106 aaPredicted RBP4.6□□□□□ -1.67
PROM1-220ENST00000540805 KLF13Q9Y2Y9 288 aaPredicted RBP4.6□□□□□ -1.67
PROM1-220ENST00000540805 PUS1Q9Y606 427 aaKnown RBP eCLIP4.6□□□□□ -1.67
PROM1-220ENST00000540805 LOC102724200A0A096LPH7 203 aaPredicted RBP4.59□□□□□ -1.67
PROM1-220ENST00000540805 A8MVM7 634 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 HRKO00198 91 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 FOXS1O43638 330 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 CDC14BO60729 498 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 PGA3P0DJD8 388 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 PI3P19957 117 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 CHATP28329 748 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 FCGR2CP31995 323 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 CAMLGP49069 296 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 UCP3P55916 312 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 PCBD1P61457 104 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 GNB2P62879 340 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 FAM3AP98173 230 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 TOMM34Q15785 309 aaPredicted RBP4.59□□□□□ -1.67
PROM1-220ENST00000540805 ZNF674Q2M3X9 581 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 VAX1Q5SQQ9 334 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 SLC22A24Q8N4F4 322 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 LRFN3Q9BTN0 628 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 HSF4Q9ULV5 492 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 GOLT1BQ9Y3E0 138 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 HIVEP3Q5T1R4 2406 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 TMEM238LA0A1B0GVL6 79 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 PRSS37A4D1T9 235 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 A8MWP6 167 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 ZNF814B7Z6K7 855 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 GEMIN2O14893 280 aaKnown RBP4.59□□□□□ -1.67
PROM1-220ENST00000540805 TCF21O43680 179 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 LMX1BO60663 402 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 HIST1H2BKO60814 126 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 OR2C1O95371 312 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 HIST1H2BJP06899 126 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 OR4A8P0C604 315 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 VSIG8P0DPA2 414 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 HIST1H2BOP23527 126 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 EPHA8P29322 1005 aaPredicted RBP4.59□□□□□ -1.67
PROM1-220ENST00000540805 HIST1H2BBP33778 126 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 HIST1H2BDP58876 126 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 HIST1H2BCP62807 126 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 RAC1P63000 192 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 GNMTQ14749 295 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 PRSS8Q16651 343 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 HIST2H2BEQ16778 126 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.59□□□□□ -1.67
PROM1-220ENST00000540805 C11orf40Q8WZ69 217 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 HIST1H2BHQ93079 126 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 TAAR8Q969N4 342 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 HIST1H2BNQ99877 126 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 HIST1H2BMQ99879 126 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 NUDT16L1Q9BRJ7 211 aaKnown RBP4.59□□□□□ -1.67
PROM1-220ENST00000540805 PBDC1Q9BVG4 233 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 FBXO7Q9Y3I1 522 aa4.59□□□□□ -1.67
PROM1-220ENST00000540805 LOC400499M0QZD8 3231 aa4.59□□□□□ -1.68
PROM1-220ENST00000540805 TRAV36DV7A0A075B6V5 113 aa4.59□□□□□ -1.68
PROM1-220ENST00000540805 M0R1B8 84 aa4.59□□□□□ -1.68
PROM1-220ENST00000540805 TOX3O15405 576 aaPredicted RBP4.59□□□□□ -1.68
PROM1-220ENST00000540805 CT45A8P0DMV1 189 aa4.59□□□□□ -1.68
PROM1-220ENST00000540805 CT45A9P0DMV2 189 aa4.59□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms