RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 RTL6Q6ICC9 239 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 TRNP1Q6NT89 227 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 ZNF343Q6P1L6 599 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 TMEM182Q6ZP80 229 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 ESPNLQ6ZVH7 1005 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 NEGR1Q7Z3B1 354 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 DOLPP1Q86YN1 238 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 SLC35F2Q8IXU6 374 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 ZNF440Q8IYI8 595 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 TEX26Q8N6G2 289 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 CSNK1A1LQ8N752 337 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 C5orf17Q8NAS9 161 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 OR4K1Q8NGD4 311 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 OR1N2Q8NGR9 330 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 OR10X1Q8NGY0 326 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 OR2AE1Q8NHA4 323 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 HMGB4Q8WW32 186 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 TMEM37Q8WXS4 190 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 CFHR4Q92496 578 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 HPDLQ96IR7 371 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 TSSK3Q96PN8 268 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 YPEL2Q96QA6 119 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 NPY6RQ99463 290 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 CHRDL1Q9BU40 450 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 GPR174Q9BXC1 333 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 SAMD10Q9BYL1 202 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 TMEM39BQ9GZU3 492 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 CHST6Q9GZX3 395 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 RPF1Q9H9Y2 349 aaKnown RBP4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 SDF2L1Q9HCN8 221 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 WRAP73Q9P2S5 460 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 OR5V1Q9UGF6 321 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 SLC2A6Q9UGQ3 507 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 SERTAD3Q9UJW9 196 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 FBXW11Q9UKB1 542 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 MCTS1Q9ULC4 181 aaKnown RBP4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 HHLA2Q9UM44 414 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 LAMP3Q9UQV4 416 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 SCN8AQ9UQD0 1980 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 STRCQ7RTU9 1775 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 ANKRD36A6QL64 1941 aa4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 TDRD15B5MCY1 1934 aaKnown RBP4.19□□□□□ -1.74
HMGB1P19-201ENST00000517578 COL11A2P13942 1736 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 TTC3P53804 2025 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 TRAV18A0A075B6X5 111 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 TRBV9A0A0B4J1U6 114 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 TRAV34A0A0B4J273 112 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 A0A1W2PR80 420 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 GAGE12HA6NDE8 117 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 OR4C45A6NMZ5 311 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 H3BMH7 237 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 J3KTA2 159 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 TAPBPO15533 448 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 PQBP1O60828 265 aaKnown RBP4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 ZNF253O75346 499 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 SCGB2A1O75556 95 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 GCM2O75603 506 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 S1PR2O95136 353 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 VENTXO95231 258 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 SFT2D2O95562 160 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 GPR75O95800 540 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 TBX6O95947 436 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 NRASP01111 189 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 KRASP01116 189 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 GNB3P16520 340 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 FUT3P21217 361 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 ADORA2BP29275 332 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 NTSR1P30989 418 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 CTRLP40313 264 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 FRKP42685 505 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 NSG1P42857 185 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 REG1BP48304 166 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 HINT1P49773 126 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 SLC25A1P53007 311 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 RPS15P62841 145 aaKnown RBP4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 ID2Q02363 134 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 Q0VG73 95 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 IL13RA2Q14627 380 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 DUSP5Q16690 384 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 AMZ1Q400G9 498 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 ZNF585BQ52M93 769 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 FRG2Q64ET8 278 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 STUMQ69YW2 141 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 AMMECR1LQ6DCA0 310 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 UNQ5815/PRO19632Q6UWF5 114 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 MRGPRGQ86SM5 289 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 UEVLDQ8IX04 471 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 C10orf111Q8N326 155 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 ZNF433Q8N7K0 673 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 NHLRC2Q8NBF2 726 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 ZBTB34Q8NCN2 500 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 OR4D11Q8NGI4 311 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 OR51G1Q8NGK1 321 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 OR10S1Q8NGN2 331 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 SLC25A40Q8TBP6 338 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 ZNF418Q8TF45 676 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 C2orf15Q8WU43 125 aaKnown RBP4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 IL22RA2Q969J5 263 aa4.18□□□□□ -1.74
HMGB1P19-201ENST00000517578 BORCS7Q96B45 105 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms