RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 FBP1P09467 338 aa10.54□□□□□ -0.72
COL5A1-206ENST00000465877 ZNF728P0DKX0 622 aa10.54□□□□□ -0.72
COL5A1-206ENST00000465877 SERPINA2P20848 420 aa10.54□□□□□ -0.72
COL5A1-206ENST00000465877 LMO1P25800 156 aa10.54□□□□□ -0.72
COL5A1-206ENST00000465877 TGFBR2P37173 567 aa10.54□□□□□ -0.72
COL5A1-206ENST00000465877 UBE2E1P51965 193 aa10.54□□□□□ -0.72
COL5A1-206ENST00000465877 ERVFRD-1P60508 538 aa10.54□□□□□ -0.72
COL5A1-206ENST00000465877 GABARAPL2P60520 117 aa10.54□□□□□ -0.72
COL5A1-206ENST00000465877 MEF2CQ06413 473 aaPredicted RBP10.54□□□□□ -0.72
COL5A1-206ENST00000465877 SCN1BQ07699 218 aa10.54□□□□□ -0.72
COL5A1-206ENST00000465877 MLLT11Q13015 90 aaPredicted RBP10.54□□□□□ -0.72
COL5A1-206ENST00000465877 ATXN7L3Q14CW9 347 aaPredicted RBP10.54□□□□□ -0.72
COL5A1-206ENST00000465877 PIGYQ3MUY2 71 aa10.54□□□□□ -0.72
COL5A1-206ENST00000465877 ASCL4Q6XD76 172 aa10.54□□□□□ -0.72
COL5A1-206ENST00000465877 JAGN1Q8N5M9 183 aa10.54□□□□□ -0.72
COL5A1-206ENST00000465877 C11orf42Q8N5U0 333 aa10.54□□□□□ -0.72
COL5A1-206ENST00000465877 MS4A15Q8N5U1 240 aa10.54□□□□□ -0.72
COL5A1-206ENST00000465877 S100A13Q99584 98 aa10.54□□□□□ -0.72
COL5A1-206ENST00000465877 Q9H521 79 aa10.54□□□□□ -0.72
COL5A1-206ENST00000465877 ZNRD1Q9P1U0 126 aa10.54□□□□□ -0.72
COL5A1-206ENST00000465877 C17orf98A8MV24 154 aa10.53□□□□□ -0.72
COL5A1-206ENST00000465877 HSPB6O14558 160 aa10.53□□□□□ -0.72
COL5A1-206ENST00000465877 SC5DO75845 299 aa10.53□□□□□ -0.72
COL5A1-206ENST00000465877 HSMCR30P0CW71 290 aa10.53□□□□□ -0.72
COL5A1-206ENST00000465877 COX7A1P24310 79 aa10.53□□□□□ -0.72
COL5A1-206ENST00000465877 ERP29P30040 261 aaKnown RBP10.53□□□□□ -0.72
COL5A1-206ENST00000465877 MAP2K4P45985 399 aa10.53□□□□□ -0.72
COL5A1-206ENST00000465877 RBM11P57052 281 aaKnown RBP10.53□□□□□ -0.72
COL5A1-206ENST00000465877 GPR50Q13585 617 aa10.53□□□□□ -0.72
COL5A1-206ENST00000465877 ACSM3Q53FZ2 586 aa10.53□□□□□ -0.72
COL5A1-206ENST00000465877 NHLRC3Q5JS37 347 aa10.53□□□□□ -0.72
COL5A1-206ENST00000465877 FAM27D1Q5T7N8 215 aa10.53□□□□□ -0.72
COL5A1-206ENST00000465877 AWAT2Q6E213 333 aa10.53□□□□□ -0.72
COL5A1-206ENST00000465877 Q6YL49 198 aa10.53□□□□□ -0.72
COL5A1-206ENST00000465877 TRAPPC6BQ86SZ2 158 aa10.53□□□□□ -0.72
COL5A1-206ENST00000465877 Q8NFD4 153 aa10.53□□□□□ -0.72
COL5A1-206ENST00000465877 MUL1Q969V5 352 aa10.53□□□□□ -0.72
COL5A1-206ENST00000465877 COQ2Q96H96 371 aa10.53□□□□□ -0.72
COL5A1-206ENST00000465877 NR1H4Q96RI1 486 aaPredicted RBP10.53□□□□□ -0.72
COL5A1-206ENST00000465877 METTL9Q9H1A3 318 aa10.53□□□□□ -0.72
COL5A1-206ENST00000465877 MRPS28Q9Y2Q9 187 aaKnown RBP10.53□□□□□ -0.72
COL5A1-206ENST00000465877 TRAV24A0A0B4J272 114 aa10.52□□□□□ -0.73
COL5A1-206ENST00000465877 A0A0G2JK05 382 aa10.52□□□□□ -0.73
COL5A1-206ENST00000465877 A0A1W2PP11 408 aa10.52□□□□□ -0.73
COL5A1-206ENST00000465877 DEGS1O15121 323 aa10.52□□□□□ -0.73
COL5A1-206ENST00000465877 ZNF780AO75290 641 aaPredicted RBP10.52□□□□□ -0.73
COL5A1-206ENST00000465877 PAHP00439 452 aa10.52□□□□□ -0.73
COL5A1-206ENST00000465877 CSTBP04080 98 aaKnown RBP10.52□□□□□ -0.73
COL5A1-206ENST00000465877 IGHV1-8P0DP01 117 aa10.52□□□□□ -0.73
COL5A1-206ENST00000465877 AESQ08117 197 aa10.52□□□□□ -0.73
COL5A1-206ENST00000465877 SLC22A6Q4U2R8 563 aa10.52□□□□□ -0.73
COL5A1-206ENST00000465877 MIDNQ504T8 468 aa10.52□□□□□ -0.73
COL5A1-206ENST00000465877 PAN3Q58A45 887 aaKnown RBP10.52□□□□□ -0.73
COL5A1-206ENST00000465877 ZNF367Q7RTV3 350 aa10.52□□□□□ -0.73
COL5A1-206ENST00000465877 CDH26Q8IXH8 852 aa10.52□□□□□ -0.73
COL5A1-206ENST00000465877 OSR2Q8N2R0 312 aa10.52□□□□□ -0.73
COL5A1-206ENST00000465877 TMEM86BQ8N661 226 aa10.52□□□□□ -0.73
COL5A1-206ENST00000465877 SSMEM1Q8WWF3 244 aa10.52□□□□□ -0.73
COL5A1-206ENST00000465877 PPIL3Q9H2H8 161 aaKnown RBP10.52□□□□□ -0.73
COL5A1-206ENST00000465877 HEXA-AS1Q9H8Q6 139 aa10.52□□□□□ -0.73
COL5A1-206ENST00000465877 ISYNA1Q9NPH2 558 aa10.52□□□□□ -0.73
COL5A1-206ENST00000465877 TNFRSF19Q9NS68 423 aa10.52□□□□□ -0.73
COL5A1-206ENST00000465877 ING4Q9UNL4 249 aa10.52□□□□□ -0.73
COL5A1-206ENST00000465877 ST3GAL6Q9Y274 331 aa10.52□□□□□ -0.73
COL5A1-206ENST00000465877 UBE2J1Q9Y385 318 aaPredicted RBP10.52□□□□□ -0.73
COL5A1-206ENST00000465877 SF3B6Q9Y3B4 125 aaKnown RBP10.52□□□□□ -0.73
COL5A1-206ENST00000465877 FAM96BQ9Y3D0 163 aa10.52□□□□□ -0.73
COL5A1-206ENST00000465877 POMT1Q9Y6A1 747 aa10.52□□□□□ -0.73
COL5A1-206ENST00000465877 TRGV10A0A0A0MS01 117 aa10.51□□□□□ -0.73
COL5A1-206ENST00000465877 ODAMA1E959 279 aa10.51□□□□□ -0.73
COL5A1-206ENST00000465877 FUOMA2VDF0 154 aa10.51□□□□□ -0.73
COL5A1-206ENST00000465877 GEMIN2O14893 280 aaKnown RBP10.51□□□□□ -0.73
COL5A1-206ENST00000465877 DENRO43583 198 aaKnown RBP10.51□□□□□ -0.73
COL5A1-206ENST00000465877 OR7C1O76099 320 aaPredicted RBP10.51□□□□□ -0.73
COL5A1-206ENST00000465877 IGHV4-59P01825 116 aa10.51□□□□□ -0.73
COL5A1-206ENST00000465877 CPEP16870 476 aa10.51□□□□□ -0.73
COL5A1-206ENST00000465877 GLIPR1P48060 266 aa10.51□□□□□ -0.73
COL5A1-206ENST00000465877 GP2P55259 537 aaKnown RBP10.51□□□□□ -0.73
COL5A1-206ENST00000465877 RPS25P62851 125 aaKnown RBP10.51□□□□□ -0.73
COL5A1-206ENST00000465877 TPBGQ13641 420 aa10.51□□□□□ -0.73
COL5A1-206ENST00000465877 MPV17LQ2QL34 196 aa10.51□□□□□ -0.73
COL5A1-206ENST00000465877 HSD17B12Q53GQ0 312 aa10.51□□□□□ -0.73
COL5A1-206ENST00000465877 KRBOX4Q5JUW0 171 aa10.51□□□□□ -0.73
COL5A1-206ENST00000465877 GLIPR1L1Q6UWM5 242 aa10.51□□□□□ -0.73
COL5A1-206ENST00000465877 UNQ9370/PRO34162Q6UXP9 181 aa10.51□□□□□ -0.73
COL5A1-206ENST00000465877 LINC00596Q86U02 117 aa10.51□□□□□ -0.73
COL5A1-206ENST00000465877 LYPD6Q86Y78 171 aa10.51□□□□□ -0.73
COL5A1-206ENST00000465877 OR4D6Q8NGJ1 314 aa10.51□□□□□ -0.73
COL5A1-206ENST00000465877 PHYHIPQ92561 330 aa10.51□□□□□ -0.73
COL5A1-206ENST00000465877 GCDHQ92947 438 aaPredicted RBP10.51□□□□□ -0.73
COL5A1-206ENST00000465877 TMEM203Q969S6 136 aa10.51□□□□□ -0.73
COL5A1-206ENST00000465877 MGLLQ99685 303 aa10.51□□□□□ -0.73
COL5A1-206ENST00000465877 CHIAQ9BZP6 476 aa10.51□□□□□ -0.73
COL5A1-206ENST00000465877 GAL3ST2Q9H3Q3 398 aa10.51□□□□□ -0.73
COL5A1-206ENST00000465877 TCF7L1Q9HCS4 588 aa10.51□□□□□ -0.73
COL5A1-206ENST00000465877 ACOT13Q9NPJ3 140 aa10.51□□□□□ -0.73
COL5A1-206ENST00000465877 ING3Q9NXR8 418 aa10.51□□□□□ -0.73
COL5A1-206ENST00000465877 ZNF581Q9P0T4 197 aa10.51□□□□□ -0.73
COL5A1-206ENST00000465877 TMEM89A2RUT3 159 aa10.5□□□□□ -0.73
COL5A1-206ENST00000465877 ODF3BA8MYP8 253 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms