RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 PRRX1P54821 245 aa15.25■□□□□ 0.03
TMEM53-201ENST00000372235 BDH1Q02338 343 aa15.25■□□□□ 0.03
TMEM53-201ENST00000372235 SCN1BQ07699 218 aa15.25■□□□□ 0.03
TMEM53-201ENST00000372235 PDLIM3Q53GG5 364 aaPredicted RBP15.25■□□□□ 0.03
TMEM53-201ENST00000372235 KRBOX4Q5JUW0 171 aa15.25■□□□□ 0.03
TMEM53-201ENST00000372235 ABHD12Q8N2K0 398 aa15.25■□□□□ 0.03
TMEM53-201ENST00000372235 KLHDC1Q8N7A1 406 aa15.25■□□□□ 0.03
TMEM53-201ENST00000372235 SETD9Q8NE22 299 aa15.25■□□□□ 0.03
TMEM53-201ENST00000372235 CAPSLQ8WWF8 208 aa15.25■□□□□ 0.03
TMEM53-201ENST00000372235 CFHR4Q92496 578 aa15.25■□□□□ 0.03
TMEM53-201ENST00000372235 SPACA5Q96QH8 159 aa15.25■□□□□ 0.03
TMEM53-201ENST00000372235 PDCD1LG2Q9BQ51 273 aa15.25■□□□□ 0.03
TMEM53-201ENST00000372235 BARHL1Q9BZE3 327 aa15.25■□□□□ 0.03
TMEM53-201ENST00000372235 PAK1IP1Q9NWT1 392 aaPredicted RBP15.25■□□□□ 0.03
TMEM53-201ENST00000372235 DPM3Q9P2X0 92 aa15.25■□□□□ 0.03
TMEM53-201ENST00000372235 AASSQ9UDR5 926 aa15.25■□□□□ 0.03
TMEM53-201ENST00000372235 TRRAPQ9Y4A5 3859 aa15.24■□□□□ 0.03
TMEM53-201ENST00000372235 ODAMA1E959 279 aa15.24■□□□□ 0.03
TMEM53-201ENST00000372235 MEGF11A6BM72 1044 aa15.24■□□□□ 0.03
TMEM53-201ENST00000372235 ZNF729A6NN14 1252 aaPredicted RBP15.24■□□□□ 0.03
TMEM53-201ENST00000372235 LEUTXA8MZ59 168 aa15.24■□□□□ 0.03
TMEM53-201ENST00000372235 TOR1AO14656 332 aa15.24■□□□□ 0.03
TMEM53-201ENST00000372235 ZP1P60852 638 aa15.24■□□□□ 0.03
TMEM53-201ENST00000372235 PPP3R1P63098 170 aa15.24■□□□□ 0.03
TMEM53-201ENST00000372235 EMX1Q04741 257 aaPredicted RBP15.24■□□□□ 0.03
TMEM53-201ENST00000372235 IL13RA2Q14627 380 aa15.24■□□□□ 0.03
TMEM53-201ENST00000372235 ARSJQ5FYB0 599 aaPredicted RBP15.24■□□□□ 0.03
TMEM53-201ENST00000372235 CCDC144NLQ6NUI1 221 aa15.24■□□□□ 0.03
TMEM53-201ENST00000372235 PACRGLQ8N7B6 248 aa15.24■□□□□ 0.03
TMEM53-201ENST00000372235 ZNF649Q9BS31 505 aa15.24■□□□□ 0.03
TMEM53-201ENST00000372235 EXOSC1Q9Y3B2 195 aaKnown RBP15.24■□□□□ 0.03
TMEM53-201ENST00000372235 HILPDAQ9Y5L2 63 aa15.24■□□□□ 0.03
TMEM53-201ENST00000372235 OOSP1A8MZH6 123 aa15.23■□□□□ 0.03
TMEM53-201ENST00000372235 SLC33A1O00400 549 aaPredicted RBP15.23■□□□□ 0.03
TMEM53-201ENST00000372235 CHST1O43916 411 aa15.23■□□□□ 0.03
TMEM53-201ENST00000372235 VSIG10L2P0DP72 767 aa15.23■□□□□ 0.03
TMEM53-201ENST00000372235 CALCBP10092 127 aa15.23■□□□□ 0.03
TMEM53-201ENST00000372235 CDK2P24941 298 aa15.23■□□□□ 0.03
TMEM53-201ENST00000372235 CD34P28906 385 aa15.23■□□□□ 0.03
TMEM53-201ENST00000372235 AESQ08117 197 aa15.23■□□□□ 0.03
TMEM53-201ENST00000372235 RSU1Q15404 277 aa15.23■□□□□ 0.03
TMEM53-201ENST00000372235 PLA1AQ53H76 456 aa15.23■□□□□ 0.03
TMEM53-201ENST00000372235 DYNAPQ8N1N2 210 aa15.23■□□□□ 0.03
TMEM53-201ENST00000372235 S100A13Q99584 98 aa15.23■□□□□ 0.03
TMEM53-201ENST00000372235 DSCAML1Q8TD84 2053 aa15.23■□□□□ 0.03
TMEM53-201ENST00000372235 MEX3AA1L020 520 aaKnown RBP15.22■□□□□ 0.03
TMEM53-201ENST00000372235 FAM90A22PA8MWA6 464 aa15.22■□□□□ 0.03
TMEM53-201ENST00000372235 KCNAB3O43448 404 aa15.22■□□□□ 0.03
TMEM53-201ENST00000372235 ZNF780AO75290 641 aaPredicted RBP15.22■□□□□ 0.03
TMEM53-201ENST00000372235 LIMS3P0CW19 117 aa15.22■□□□□ 0.03
TMEM53-201ENST00000372235 LIMS4P0CW20 117 aa15.22■□□□□ 0.03
TMEM53-201ENST00000372235 C21orf33P30042 268 aaPredicted RBP15.22■□□□□ 0.03
TMEM53-201ENST00000372235 GLIPR1P48060 266 aa15.22■□□□□ 0.03
TMEM53-201ENST00000372235 RAB13P51153 203 aa15.22■□□□□ 0.03
TMEM53-201ENST00000372235 PAX5Q02548 391 aa15.22■□□□□ 0.03
TMEM53-201ENST00000372235 CDK5R1Q15078 307 aa15.22■□□□□ 0.03
TMEM53-201ENST00000372235 ZNF529Q6P280 563 aa15.22■□□□□ 0.03
TMEM53-201ENST00000372235 Q6P435 159 aa15.22■□□□□ 0.03
TMEM53-201ENST00000372235 SATL1Q86VE3 508 aa15.22■□□□□ 0.03
TMEM53-201ENST00000372235 OR51T1Q8NGJ9 327 aa15.22■□□□□ 0.03
TMEM53-201ENST00000372235 OR4P4Q8NGL7 312 aa15.22■□□□□ 0.03
TMEM53-201ENST00000372235 FAM110DQ8TAY7 271 aaPredicted RBP15.22■□□□□ 0.03
TMEM53-201ENST00000372235 TNFAIP8L1Q8WVP5 186 aa15.22■□□□□ 0.03
TMEM53-201ENST00000372235 APH1BQ8WW43 257 aa15.22■□□□□ 0.03
TMEM53-201ENST00000372235 ZNF702PQ9H963 129 aa15.22■□□□□ 0.03
TMEM53-201ENST00000372235 TMEM138Q9NPI0 162 aa15.22■□□□□ 0.03
TMEM53-201ENST00000372235 BABAM2Q9NXR7 383 aa15.22■□□□□ 0.03
TMEM53-201ENST00000372235 DIMT1Q9UNQ2 313 aaKnown RBP15.22■□□□□ 0.03
TMEM53-201ENST00000372235 SIGLEC9Q9Y336 463 aa15.22■□□□□ 0.03
TMEM53-201ENST00000372235 HSPE1-MOB4S4R3N1 261 aa15.22■□□□□ 0.03
TMEM53-201ENST00000372235 TET2Q6N021 2002 aaPredicted RBP15.21■□□□□ 0.03
TMEM53-201ENST00000372235 A0A087X0M5 115 aa15.21■□□□□ 0.03
TMEM53-201ENST00000372235 A0A1B0GX30 115 aa15.21■□□□□ 0.03
TMEM53-201ENST00000372235 E9PI62 339 aa15.21■□□□□ 0.03
TMEM53-201ENST00000372235 H0YJX3 145 aa15.21■□□□□ 0.03
TMEM53-201ENST00000372235 FBXO24O75426 580 aa15.21■□□□□ 0.03
TMEM53-201ENST00000372235 TSPAN15O95858 294 aa15.21■□□□□ 0.03
TMEM53-201ENST00000372235 PAX6P26367 422 aa15.21■□□□□ 0.03
TMEM53-201ENST00000372235 MNDAP41218 407 aa15.21■□□□□ 0.03
TMEM53-201ENST00000372235 PAN3Q58A45 887 aaKnown RBP15.21■□□□□ 0.03
TMEM53-201ENST00000372235 LINC00596Q86U02 117 aa15.21■□□□□ 0.03
TMEM53-201ENST00000372235 Q8NFD4 153 aa15.21■□□□□ 0.03
TMEM53-201ENST00000372235 TMEM106AQ96A25 262 aa15.21■□□□□ 0.03
TMEM53-201ENST00000372235 SMIM19Q96E16 107 aa15.21■□□□□ 0.03
TMEM53-201ENST00000372235 METTL9Q9H1A3 318 aa15.21■□□□□ 0.03
TMEM53-201ENST00000372235 LIN7BQ9HAP6 207 aa15.21■□□□□ 0.03
TMEM53-201ENST00000372235 CKLFQ9UBR5 152 aa15.21■□□□□ 0.03
TMEM53-201ENST00000372235 ZNF281Q9Y2X9 895 aa15.21■□□□□ 0.03
TMEM53-201ENST00000372235 AMMECR1Q9Y4X0 333 aaPredicted RBP15.21■□□□□ 0.03
TMEM53-201ENST00000372235 KBTBD11-OT1A0A1B0GTJ5 212 aa15.2■□□□□ 0.02
TMEM53-201ENST00000372235 WBP4O75554 376 aaKnown RBP15.2■□□□□ 0.02
TMEM53-201ENST00000372235 IGLV1-47P01700 117 aa15.2■□□□□ 0.02
TMEM53-201ENST00000372235 CSTBP04080 98 aaKnown RBP15.2■□□□□ 0.02
TMEM53-201ENST00000372235 GPR176Q14439 515 aa15.2■□□□□ 0.02
TMEM53-201ENST00000372235 PRAMEF5Q5TYX0 476 aa15.2■□□□□ 0.02
TMEM53-201ENST00000372235 CCBE1Q6UXH8 406 aaPredicted RBP15.2■□□□□ 0.02
TMEM53-201ENST00000372235 SLC16A12Q6ZSM3 486 aa15.2■□□□□ 0.02
TMEM53-201ENST00000372235 TMEM219Q86XT9 240 aa15.2■□□□□ 0.02
TMEM53-201ENST00000372235 OR10A7Q8NGE5 316 aa15.2■□□□□ 0.02
TMEM53-201ENST00000372235 CNIH3Q8TBE1 160 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms