RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 BCL3P20749 454 aa12.02□□□□□ -0.49
USF1-202ENST00000368020 ZP3P21754 424 aa12.02□□□□□ -0.49
USF1-202ENST00000368020 LUMP51884 338 aaPredicted RBP12.02□□□□□ -0.49
USF1-202ENST00000368020 RBM39Q14498 530 aaKnown RBP12.02□□□□□ -0.49
USF1-202ENST00000368020 ATXN7L3Q14CW9 347 aaPredicted RBP12.02□□□□□ -0.49
USF1-202ENST00000368020 HIKESHIQ53FT3 197 aa12.02□□□□□ -0.49
USF1-202ENST00000368020 PAN3Q58A45 887 aaKnown RBP12.02□□□□□ -0.49
USF1-202ENST00000368020 Q6ZT83 130 aa12.02□□□□□ -0.49
USF1-202ENST00000368020 FAM214BQ7L5A3 538 aa12.02□□□□□ -0.49
USF1-202ENST00000368020 MDP1Q86V88 176 aa12.02□□□□□ -0.49
USF1-202ENST00000368020 SLAMF9Q96A28 289 aa12.02□□□□□ -0.49
USF1-202ENST00000368020 RTL8AQ9BWD3 113 aa12.02□□□□□ -0.49
USF1-202ENST00000368020 NAA60Q9H7X0 242 aa12.02□□□□□ -0.49
USF1-202ENST00000368020 IFT22Q9H7X7 185 aa12.02□□□□□ -0.49
USF1-202ENST00000368020 FBXO9Q9UK97 447 aaPredicted RBP12.02□□□□□ -0.49
USF1-202ENST00000368020 PKD1L2Q7Z442 2459 aa12.01□□□□□ -0.49
USF1-202ENST00000368020 PIEZO2Q9H5I5 2752 aa12.01□□□□□ -0.49
USF1-202ENST00000368020 NGFP01138 241 aa12.01□□□□□ -0.49
USF1-202ENST00000368020 TK1P04183 234 aa12.01□□□□□ -0.49
USF1-202ENST00000368020 HOXC12P31275 282 aa12.01□□□□□ -0.49
USF1-202ENST00000368020 FCGR2CP31995 323 aa12.01□□□□□ -0.49
USF1-202ENST00000368020 NPBWR2P48146 333 aa12.01□□□□□ -0.49
USF1-202ENST00000368020 IL15RAQ13261 267 aa12.01□□□□□ -0.49
USF1-202ENST00000368020 SNTB1Q13884 538 aaKnown RBP12.01□□□□□ -0.49
USF1-202ENST00000368020 Q6ZS92 163 aa12.01□□□□□ -0.49
USF1-202ENST00000368020 NAXEQ8NCW5 288 aa12.01□□□□□ -0.49
USF1-202ENST00000368020 RTN4IP1Q8WWV3 396 aaPredicted RBP12.01□□□□□ -0.49
USF1-202ENST00000368020 WNT2BQ93097 391 aa12.01□□□□□ -0.49
USF1-202ENST00000368020 ABHD17AQ96GS6 310 aa12.01□□□□□ -0.49
USF1-202ENST00000368020 RNF126Q9BV68 326 aa12.01□□□□□ -0.49
USF1-202ENST00000368020 SHARPINQ9H0F6 387 aa12.01□□□□□ -0.49
USF1-202ENST00000368020 CDH20Q9HBT6 801 aa12.01□□□□□ -0.49
USF1-202ENST00000368020 H7C1Q1 480 aa12□□□□□ -0.49
USF1-202ENST00000368020 MSTNO14793 375 aa12□□□□□ -0.49
USF1-202ENST00000368020 NAPSAO96009 420 aa12□□□□□ -0.49
USF1-202ENST00000368020 ZNF14P17017 642 aaPredicted RBP12□□□□□ -0.49
USF1-202ENST00000368020 M6PRP20645 277 aa12□□□□□ -0.49
USF1-202ENST00000368020 WNT5AP41221 380 aa12□□□□□ -0.49
USF1-202ENST00000368020 GUSBP1Q15486 140 aa12□□□□□ -0.49
USF1-202ENST00000368020 EIF5AL1Q6IS14 154 aaKnown RBP12□□□□□ -0.49
USF1-202ENST00000368020 OR1S1Q8NH92 325 aa12□□□□□ -0.49
USF1-202ENST00000368020 TOMM40LQ969M1 308 aa12□□□□□ -0.49
USF1-202ENST00000368020 ZNF75AQ96N20 296 aa12□□□□□ -0.49
USF1-202ENST00000368020 MICU1Q9BPX6 476 aa12□□□□□ -0.49
USF1-202ENST00000368020 RSRP1Q9BUV0 290 aa12□□□□□ -0.49
USF1-202ENST00000368020 WDR13Q9H1Z4 485 aa12□□□□□ -0.49
USF1-202ENST00000368020 SLC2A9Q9NRM0 540 aa12□□□□□ -0.49
USF1-202ENST00000368020 POLDIP2Q9Y2S7 368 aa12□□□□□ -0.49
USF1-202ENST00000368020 DSPP15924 2871 aaKnown RBP12□□□□□ -0.49
USF1-202ENST00000368020 TRBV6-6A0A0A6YYG2 114 aa12□□□□□ -0.49
USF1-202ENST00000368020 J3QT63 122 aa12□□□□□ -0.49
USF1-202ENST00000368020 HOXB5P09067 269 aa12□□□□□ -0.49
USF1-202ENST00000368020 RAC2P15153 192 aa12□□□□□ -0.49
USF1-202ENST00000368020 ZNF169Q14929 603 aaPredicted RBP12□□□□□ -0.49
USF1-202ENST00000368020 GABRA6Q16445 453 aa12□□□□□ -0.49
USF1-202ENST00000368020 IAH1Q2TAA2 248 aaPredicted RBP12□□□□□ -0.49
USF1-202ENST00000368020 C1orf174Q8IYL3 243 aa12□□□□□ -0.49
USF1-202ENST00000368020 LGI3Q8N145 548 aa12□□□□□ -0.49
USF1-202ENST00000368020 OR10C1Q96KK4 312 aa12□□□□□ -0.49
USF1-202ENST00000368020 REG4Q9BYZ8 158 aa12□□□□□ -0.49
USF1-202ENST00000368020 PRORYQ9H606 182 aa12□□□□□ -0.49
USF1-202ENST00000368020 Q9N2K0 584 aa12□□□□□ -0.49
USF1-202ENST00000368020 MTCH1Q9NZJ7 389 aa12□□□□□ -0.49
USF1-202ENST00000368020 LRP5LA4QPB2 252 aa11.99□□□□□ -0.49
USF1-202ENST00000368020 A8MXK9 166 aa11.99□□□□□ -0.49
USF1-202ENST00000368020 AHRRA9YTQ3 701 aa11.99□□□□□ -0.49
USF1-202ENST00000368020 CRYZL1O95825 349 aa11.99□□□□□ -0.49
USF1-202ENST00000368020 PPYP01298 95 aa11.99□□□□□ -0.49
USF1-202ENST00000368020 S100GP29377 79 aa11.99□□□□□ -0.49
USF1-202ENST00000368020 MDH2P40926 338 aaKnown RBP11.99□□□□□ -0.49
USF1-202ENST00000368020 HAGHLQ6PII5 290 aaPredicted RBP11.99□□□□□ -0.49
USF1-202ENST00000368020 FAM58AQ8N1B3 248 aa11.99□□□□□ -0.49
USF1-202ENST00000368020 NEK7Q8TDX7 302 aa11.99□□□□□ -0.49
USF1-202ENST00000368020 PCNPQ8WW12 178 aaKnown RBP11.99□□□□□ -0.49
USF1-202ENST00000368020 CNTNAP3BQ96NU0 1288 aa11.99□□□□□ -0.49
USF1-202ENST00000368020 TRIB1Q96RU8 372 aa11.99□□□□□ -0.49
USF1-202ENST00000368020 CNTNAP3Q9BZ76 1288 aa11.99□□□□□ -0.49
USF1-202ENST00000368020 OBP2BQ9NPH6 170 aa11.99□□□□□ -0.49
USF1-202ENST00000368020 TREM2Q9NZC2 230 aa11.99□□□□□ -0.49
USF1-202ENST00000368020 NUDT19A8MXV4 375 aa11.98□□□□□ -0.49
USF1-202ENST00000368020 TRDCB7Z8K6 153 aa11.98□□□□□ -0.49
USF1-202ENST00000368020 SMPD2O60906 423 aa11.98□□□□□ -0.49
USF1-202ENST00000368020 FGF2P09038 288 aa11.98□□□□□ -0.49
USF1-202ENST00000368020 PRKACAP17612 351 aa11.98□□□□□ -0.49
USF1-202ENST00000368020 IGHV1-2P23083 117 aa11.98□□□□□ -0.49
USF1-202ENST00000368020 FXYD4P59646 89 aa11.98□□□□□ -0.49
USF1-202ENST00000368020 RND3P61587 244 aa11.98□□□□□ -0.49
USF1-202ENST00000368020 PPP1CBP62140 327 aa11.98□□□□□ -0.49
USF1-202ENST00000368020 PMP22Q01453 160 aa11.98□□□□□ -0.49
USF1-202ENST00000368020 RAB32Q13637 225 aa11.98□□□□□ -0.49
USF1-202ENST00000368020 TMEM187Q14656 261 aa11.98□□□□□ -0.49
USF1-202ENST00000368020 DAZAP2Q15038 168 aaPredicted RBP11.98□□□□□ -0.49
USF1-202ENST00000368020 LIAT1Q6ZQX7 453 aa11.98□□□□□ -0.49
USF1-202ENST00000368020 MOB1BQ7L9L4 216 aa11.98□□□□□ -0.49
USF1-202ENST00000368020 BAP18Q8IXM2 172 aa11.98□□□□□ -0.49
USF1-202ENST00000368020 C17orf78Q8N4C9 275 aa11.98□□□□□ -0.49
USF1-202ENST00000368020 RBMXL3Q8N7X1 1067 aaKnown RBP11.98□□□□□ -0.49
USF1-202ENST00000368020 OR5T2Q8NGG2 359 aa11.98□□□□□ -0.49
USF1-202ENST00000368020 CYYR1Q96J86 154 aa11.98□□□□□ -0.49
USF1-202ENST00000368020 CXorf58Q96LI9 332 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms