RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 RAB25P57735 213 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 MEF2CQ06413 473 aaPredicted RBP2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 SMAGPQ0VAQ4 97 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 PDK2Q15119 407 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 TMED2Q15363 201 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 SSX1Q16384 188 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 SMUG1Q53HV7 270 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 YIF1BQ5BJH7 314 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 TRAPPC5Q8IUR0 188 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 SLC25A45Q8N413 288 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 ZNF645Q8N7E2 425 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 TTLQ8NG68 377 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 OR1M1Q8NGA1 313 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 OR4K5Q8NGD3 323 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 C16orf78Q8WTQ4 265 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 CYGBQ8WWM9 190 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 TAMM41Q96BW9 452 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 TLCD1Q96CP7 247 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 YPEL4Q96NS1 127 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 ZNF382Q96SR6 550 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 EBPLQ9BY08 206 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 BCL2L14Q9BZR8 327 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 CHST5Q9GZS9 411 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 VCX3BQ9H321 246 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 OR51B6Q9H340 312 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 FBXL15Q9H469 300 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 UBQLN4Q9NRR5 601 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 FARSAQ9Y285 508 aaKnown RBP2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 ZNF780BQ9Y6R6 833 aa2.54□□□□□ -2
RNU6-1249P-201ENST00000363237 PTPRKQ15262 1439 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 ADGRL3Q9HAR2 1447 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 GTF3C1Q12789 2109 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 CLUHO75153 1309 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 TTC21AQ8NDW8 1320 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 A0A1W2PP18 115 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 TMEM72A0PK05 275 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 KLLNB2CW77 178 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 TRIM49D1C9J1S8 452 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 C8orf87E5RJ46 101 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 ANGPTL7O43827 346 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 APCSP02743 223 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 HIST1H1EP10412 219 aaKnown RBP2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 KLK2P20151 261 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 RPL12P30050 165 aaKnown RBP2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 KRTAP10-7P60409 375 aaPredicted RBP2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 KRTAP10-9P60411 292 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 ERVS71-1P61550 626 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 VBP1P61758 197 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 LSM6P62312 80 aaKnown RBP2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 ARF6P62330 175 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 ESRRGP62508 458 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 GLO1Q04760 184 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 AESQ08117 197 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 TSPAN31Q12999 210 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 PSG7Q13046 419 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 UBE2SQ16763 222 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 LINC00303Q3SY05 128 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 ZNF658BQ4V348 819 aaPredicted RBP2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 KRTAP5-4Q6L8H1 288 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 ZNF774Q6NX45 483 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 FBXL22Q6P050 247 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 XKRXQ6PP77 449 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 OLIG3Q7RTU3 272 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 LINC00596Q86U02 117 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 STX12Q86Y82 276 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 ZFP82Q8N141 532 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 TMEM256Q8N2U0 113 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 C11orf42Q8N5U0 333 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 SLC25A29Q8N8R3 303 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 OR4C13Q8NGP0 309 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 OR5W2Q8NH69 310 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 SLC37A2Q8TED4 501 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 ZNF414Q96IQ9 312 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 RNF157Q96PX1 679 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 PRSS27Q9BQR3 290 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 ANAPC13Q9BS18 74 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 C12orf10Q9HB07 376 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 C8orf17Q9NRJ1 99 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 SLC2A9Q9NRM0 540 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 RBM12B-AS1Q9P1G2 102 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 ATPIF1Q9UII2 106 aa2.53□□□□□ -2
RNU6-1249P-201ENST00000363237 IGKV6-21A0A0C4DH24 114 aa2.52□□□□□ -2.01
RNU6-1249P-201ENST00000363237 H0YJW9 148 aa2.52□□□□□ -2.01
RNU6-1249P-201ENST00000363237 TCF21O43680 179 aa2.52□□□□□ -2.01
RNU6-1249P-201ENST00000363237 FOXH1O75593 365 aa2.52□□□□□ -2.01
RNU6-1249P-201ENST00000363237 EPPINO95925 133 aa2.52□□□□□ -2.01
RNU6-1249P-201ENST00000363237 CYB5R3P00387 301 aaPredicted RBP2.52□□□□□ -2.01
RNU6-1249P-201ENST00000363237 HLA-DQA1P01909 254 aa2.52□□□□□ -2.01
RNU6-1249P-201ENST00000363237 MAS1P04201 325 aa2.52□□□□□ -2.01
RNU6-1249P-201ENST00000363237 TCRBP04435 133 aa2.52□□□□□ -2.01
RNU6-1249P-201ENST00000363237 OR56A5P0C7T3 313 aa2.52□□□□□ -2.01
RNU6-1249P-201ENST00000363237 LINC00614P0C842 121 aa2.52□□□□□ -2.01
RNU6-1249P-201ENST00000363237 SCGB1C2P0DMR2 95 aa2.52□□□□□ -2.01
RNU6-1249P-201ENST00000363237 PSG2P11465 335 aa2.52□□□□□ -2.01
RNU6-1249P-201ENST00000363237 ME2P23368 584 aa2.52□□□□□ -2.01
RNU6-1249P-201ENST00000363237 IMPA1P29218 277 aa2.52□□□□□ -2.01
RNU6-1249P-201ENST00000363237 ADORA1P30542 326 aa2.52□□□□□ -2.01
RNU6-1249P-201ENST00000363237 PPP1R2P41236 205 aa2.52□□□□□ -2.01
RNU6-1249P-201ENST00000363237 HSPA13P48723 471 aa2.52□□□□□ -2.01
RNU6-1249P-201ENST00000363237 GDI2P50395 445 aaKnown RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms