RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 PROB1E7EW31 1015 aa16.47■□□□□ 0.23
RTN4-201ENST00000317610 HSPA12AO43301 675 aa16.47■□□□□ 0.23
RTN4-201ENST00000317610 MMP9P14780 707 aa16.47■□□□□ 0.23
RTN4-201ENST00000317610 ZNF32P17041 273 aa16.47■□□□□ 0.23
RTN4-201ENST00000317610 TRIM61Q5EBN2 209 aa16.47■□□□□ 0.23
RTN4-201ENST00000317610 GUSBP11Q6P575 273 aa16.47■□□□□ 0.23
RTN4-201ENST00000317610 ZFP62Q8NB50 900 aaPredicted RBP16.47■□□□□ 0.23
RTN4-201ENST00000317610 TECTBQ96PL2 329 aa16.47■□□□□ 0.23
RTN4-201ENST00000317610 GGACTQ9BVM4 153 aa16.47■□□□□ 0.23
RTN4-201ENST00000317610 TOLLIPQ9H0E2 274 aa16.47■□□□□ 0.23
RTN4-201ENST00000317610 GLRX2Q9NS18 164 aa16.47■□□□□ 0.23
RTN4-201ENST00000317610 DUXBA0A1W2PPF3 345 aa16.47■□□□□ 0.23
RTN4-201ENST00000317610 CCDC85CA6NKD9 419 aa16.47■□□□□ 0.23
RTN4-201ENST00000317610 CEACAM1P13688 526 aa16.47■□□□□ 0.23
RTN4-201ENST00000317610 KIAA0141Q14154 515 aaPredicted RBP16.47■□□□□ 0.23
RTN4-201ENST00000317610 SRSF7Q16629 238 aaKnown RBP eCLIP16.47■□□□□ 0.23
RTN4-201ENST00000317610 IGSF11Q5DX21 431 aa16.47■□□□□ 0.23
RTN4-201ENST00000317610 ZNF506Q5JVG8 444 aa16.47■□□□□ 0.23
RTN4-201ENST00000317610 TBC1D26Q86UD7 250 aa16.47■□□□□ 0.23
RTN4-201ENST00000317610 Q8NFD4 153 aa16.47■□□□□ 0.23
RTN4-201ENST00000317610 CPT1CQ8TCG5 803 aa16.47■□□□□ 0.23
RTN4-201ENST00000317610 WDR54Q9H977 334 aa16.47■□□□□ 0.23
RTN4-201ENST00000317610 HSPB1P04792 205 aaKnown RBP16.46■□□□□ 0.23
RTN4-201ENST00000317610 RPS10P46783 165 aaKnown RBP16.46■□□□□ 0.23
RTN4-201ENST00000317610 CDX1P47902 265 aaPredicted RBP16.46■□□□□ 0.23
RTN4-201ENST00000317610 CCL7P80098 99 aa16.46■□□□□ 0.23
RTN4-201ENST00000317610 BAXQ07812 192 aa16.46■□□□□ 0.23
RTN4-201ENST00000317610 HAGHQ16775 308 aa16.46■□□□□ 0.23
RTN4-201ENST00000317610 ZNF695Q8IW36 515 aa16.46■□□□□ 0.23
RTN4-201ENST00000317610 GNPNAT1Q96EK6 184 aaPredicted RBP16.46■□□□□ 0.23
RTN4-201ENST00000317610 ZNF442Q9H7R0 627 aa16.46■□□□□ 0.23
RTN4-201ENST00000317610 CRLF2Q9HC73 371 aa16.46■□□□□ 0.23
RTN4-201ENST00000317610 FAM86C1Q9NVL1 165 aa16.46■□□□□ 0.23
RTN4-201ENST00000317610 UBE2J1Q9Y385 318 aaPredicted RBP16.46■□□□□ 0.23
RTN4-201ENST00000317610 TRIOO75962 3097 aa16.46■□□□□ 0.23
RTN4-201ENST00000317610 IGHV1-45A0A0A0MS14 117 aa16.46■□□□□ 0.23
RTN4-201ENST00000317610 IFITM10A6NMD0 228 aa16.46■□□□□ 0.23
RTN4-201ENST00000317610 NTF4P34130 210 aa16.46■□□□□ 0.23
RTN4-201ENST00000317610 RAB2AP61019 212 aa16.46■□□□□ 0.23
RTN4-201ENST00000317610 ZNF92Q03936 586 aa16.46■□□□□ 0.23
RTN4-201ENST00000317610 ICAM4Q14773 271 aa16.46■□□□□ 0.23
RTN4-201ENST00000317610 PDCD1Q15116 288 aa16.46■□□□□ 0.23
RTN4-201ENST00000317610 CDCP2Q5VXM1 449 aa16.46■□□□□ 0.23
RTN4-201ENST00000317610 NAXEQ8NCW5 288 aa16.46■□□□□ 0.23
RTN4-201ENST00000317610 SLAMF9Q96A28 289 aa16.46■□□□□ 0.23
RTN4-201ENST00000317610 IMMP1LQ96LU5 166 aa16.46■□□□□ 0.23
RTN4-201ENST00000317610 CCDC74BQ96LY2 380 aa16.46■□□□□ 0.23
RTN4-201ENST00000317610 SLC7A10Q9NS82 523 aa16.46■□□□□ 0.23
RTN4-201ENST00000317610 DMRT1Q9Y5R6 373 aa16.46■□□□□ 0.23
RTN4-201ENST00000317610 LY6G6EA0A0G2JKS1 128 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 CXorf65A6NEN9 183 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 GJE1A6NN92 205 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 RPL36A-HNRNPH2H7BZ11 118 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 SSSCA1O60232 199 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 SCAF4O95104 1147 aaKnown RBP16.45■□□□□ 0.22
RTN4-201ENST00000317610 RAC3P60763 192 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 PSG4Q00888 419 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 ID3Q02535 119 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 ELOBQ15370 118 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 NMSQ5H8A3 153 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 PLCXD3Q63HM9 321 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 SUMF1Q8NBK3 374 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 OR5C1Q8NGR4 320 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 SIGLEC12Q96PQ1 595 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 WNT5BQ9H1J7 359 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 U3KQA8 63 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 SPEGQ15772 3267 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 ZNF816-ZNF321PA0A0X1KG74 233 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 FAM90A10PA6NDY2 464 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 FAM90A18PA6NE21 464 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 FAM90A16PA6NEW6 464 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 FAM90A20PA6NIJ5 464 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 FAM90A8PA6NJQ4 464 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 FAM90A7PA6NKC0 464 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 FAM90A22PA8MWA6 464 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 FAM90A12PA8MX19 464 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 FAM90A5PA8MXJ8 464 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 FAM90A23PA8MXZ1 464 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 FAM90A15PP0C7V4 464 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 FAM90A13PP0C7W8 464 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 FAM90A14PP0C7W9 464 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 FAM90A24PP0C7X0 464 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 TAGLN2P37802 199 aaKnown RBP16.45■□□□□ 0.22
RTN4-201ENST00000317610 LBX1P52954 281 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 CXorf66Q5JRM2 361 aaPredicted RBP16.45■□□□□ 0.22
RTN4-201ENST00000317610 DPPA3Q6W0C5 159 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 WDR5BQ86VZ2 330 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 SIRT7Q9NRC8 400 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 P4HTMQ9NXG6 502 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 LIPGQ9Y5X9 500 aa16.45■□□□□ 0.22
RTN4-201ENST00000317610 ZNF727A8MUV8 499 aa16.44■□□□□ 0.22
RTN4-201ENST00000317610 ADAM20O43506 726 aa16.44■□□□□ 0.22
RTN4-201ENST00000317610 OMGP23515 440 aa16.44■□□□□ 0.22
RTN4-201ENST00000317610 ITGA3P26006 1051 aa16.44■□□□□ 0.22
RTN4-201ENST00000317610 DYNLT3P51808 116 aa16.44■□□□□ 0.22
RTN4-201ENST00000317610 UBE2KP61086 200 aa16.44■□□□□ 0.22
RTN4-201ENST00000317610 VAMP2P63027 116 aa16.44■□□□□ 0.22
RTN4-201ENST00000317610 CALHM1Q8IU99 346 aa16.44■□□□□ 0.22
RTN4-201ENST00000317610 PLPPR1Q8TBJ4 325 aa16.44■□□□□ 0.22
RTN4-201ENST00000317610 Q8WTZ3 238 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms