RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 TMEM203Q969S6 136 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 PPP1R14BQ96C90 147 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 FAHD2AQ96GK7 314 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 GPX7Q96SL4 187 aaPredicted RBP3.1□□□□□ -1.91
SMCO3-201ENST00000316048 CTRCQ99895 268 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 MED18Q9BUE0 208 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 KRTAP1-5Q9BYS1 174 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 GPR61Q9BZJ8 451 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 RNF167Q9H6Y7 350 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 SPACA1Q9HBV2 294 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 TXNL4BQ9NX01 149 aaKnown RBP3.1□□□□□ -1.91
SMCO3-201ENST00000316048 SLC39A1Q9NY26 324 aa3.1□□□□□ -1.91
SMCO3-201ENST00000316048 NUP210LQ5VU65 1888 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 XIRP2A4UGR9 3374 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 IGKV1D-42A0A075B6H8 117 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 TMED7-TICAM2A0A0A6YYA0 188 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 ISPDA4D126 451 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 LRRN3E7EW58 273 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 LOC110117498-PIK3R3F6TDL0 507 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 J3QLW9 94 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 J3QRK9 145 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 SLC17A2O00624 439 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 XKRYO14609 159 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 CDX4O14627 284 aaPredicted RBP3.09□□□□□ -1.91
SMCO3-201ENST00000316048 RGS5O15539 181 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 PFDN1O60925 122 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 CDRT1O95170 752 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 AHSA1O95433 338 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 TACSTD2P09758 323 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 ASAH2BP0C7U1 165 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 ICAM2P13598 275 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 ZNF19P17023 458 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 SLC2A5P22732 501 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 IGHV1-2P23083 117 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 CFL1P23528 166 aaKnown RBP3.09□□□□□ -1.91
SMCO3-201ENST00000316048 FKBP2P26885 142 aaKnown RBP3.09□□□□□ -1.91
SMCO3-201ENST00000316048 RPS5P46782 204 aaKnown RBP3.09□□□□□ -1.91
SMCO3-201ENST00000316048 EFNA3P52797 238 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 SLC25A1P53007 311 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 PRRX1P54821 245 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 PAX2Q02962 417 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 MXD1Q05195 221 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 RIPPLY1Q0D2K3 151 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 COTL1Q14019 142 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 QPRTQ15274 297 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 ANGPT1Q15389 498 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 FCN2Q15485 313 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 BCL2A1Q16548 175 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 LPAL2Q16609 132 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 ZNF181Q2M3W8 571 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 ZNF791Q3KP31 576 aaPredicted RBP3.09□□□□□ -1.91
SMCO3-201ENST00000316048 C22orf42Q6IC83 251 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 DEGS2Q6QHC5 323 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 PAMR1Q6UXH9 720 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 SYS1Q8N2H4 156 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 MS4A15Q8N5U1 240 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 ZNF485Q8NCK3 441 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 SDR9C7Q8NEX9 313 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 ATP6V1C2Q8NEY4 427 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 OR2T4Q8NH00 348 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 HAVCR2Q8TDQ0 301 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 ST8SIA1Q92185 356 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 SLC25A46Q96AG3 418 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 DDIT4LQ96D03 193 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 NMNAT3Q96T66 252 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 CNN2Q99439 309 aaKnown RBP3.09□□□□□ -1.91
SMCO3-201ENST00000316048 TBX5Q99593 518 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 KCNS3Q9BQ31 491 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 MRPL37Q9BZE1 423 aaKnown RBP3.09□□□□□ -1.91
SMCO3-201ENST00000316048 ULBP3Q9BZM4 244 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 TPK1Q9H3S4 243 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 RERGLQ9H628 205 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 RASD1Q9Y272 281 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 UGT2A1Q9Y4X1 527 aa3.09□□□□□ -1.91
SMCO3-201ENST00000316048 TNRC6BQ9UPQ9 1833 aaKnown RBP3.09□□□□□ -1.91
SMCO3-201ENST00000316048 A0A1B0GVG6 124 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 A0A1W2PQL4 384 aaPredicted RBP3.08□□□□□ -1.92
SMCO3-201ENST00000316048 A0A1W2PRG6 482 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 TMEM72A0PK05 275 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 CCDC182A6NF36 153 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 CENPBD1B2RD01 187 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 GABRPO00591 440 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 RS1O15537 224 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 RNF13O43567 381 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 BGLAPP02818 100 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 GYPBP06028 91 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 MRPL3P09001 348 aaKnown RBP3.08□□□□□ -1.92
SMCO3-201ENST00000316048 H2BFMP0C1H6 154 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 OCM2P0CE71 109 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 OCMP0CE72 109 aaPredicted RBP3.08□□□□□ -1.92
SMCO3-201ENST00000316048 CCL4P13236 92 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 SPI1P17947 270 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 GTF2E2P29084 291 aaKnown RBP3.08□□□□□ -1.92
SMCO3-201ENST00000316048 PYCR1P32322 319 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 CD80P33681 288 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 SDC2P34741 201 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 ETV6P41212 452 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 FBXW4P57775 412 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 DEFA1P59665 94 aa3.08□□□□□ -1.92
SMCO3-201ENST00000316048 DEFA3P59666 94 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms