RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 LDB3O75112 727 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 CNMDO75829 334 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 IGLV3-19P01714 112 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 RPS26P62854 115 aaKnown RBP3.56□□□□□ -1.84
USH2A-201ENST00000307340 CCL14Q16627 93 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 RGS7BPQ6MZT1 257 aaPredicted RBP3.56□□□□□ -1.84
USH2A-201ENST00000307340 C16orf52Q8NHV5 167 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 OR2J1Q9GZK6 312 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 OCEL1Q9H607 264 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 QDPRP09417 244 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 CLDN17P56750 224 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 ACKR1Q16570 336 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 ETFBKMTQ8IXQ9 262 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 CELF2-AS1Q8N7Q2 184 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 ZDHHC11Q9H8X9 412 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 CTSCP53634 463 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 RPL18Q07020 188 aaKnown RBP3.56□□□□□ -1.84
USH2A-201ENST00000307340 RPEL1Q2QD12 228 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 PNPLA1Q8N8W4 532 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 OR2Y1Q8NGV0 311 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 MRGPRDQ8TDS7 321 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 ZNF230Q9UIE0 474 aaPredicted RBP3.56□□□□□ -1.84
USH2A-201ENST00000307340 C3orf85A0A1B0GTC6 90 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 CSF2RBP32927 897 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 OR8G2PQ6IF36 304 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 FADS6Q8N9I5 356 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 OR51H1Q8NH63 302 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 BEX1Q9HBH7 125 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 CA14Q9ULX7 337 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 H7C1H1 209 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 KLKB1P03952 638 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 AMTP48728 403 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 FABP5Q01469 135 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 SQSTM1Q13501 440 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 LINC01545Q5VT33 79 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 VWA1Q6PCB0 445 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 MEX3BQ6ZN04 569 aaKnown RBP3.56□□□□□ -1.84
USH2A-201ENST00000307340 TCF23Q7RTU1 214 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 DNAJB12Q9NXW2 375 aaKnown RBP3.56□□□□□ -1.84
USH2A-201ENST00000307340 PROCRQ9UNN8 238 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 TCL1AP56279 114 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 OR4A47Q6IF82 309 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 FAM71F1Q96KD3 344 aaPredicted RBP3.56□□□□□ -1.84
USH2A-201ENST00000307340 SPTA1P02549 2419 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 MAT1AQ00266 395 aaKnown RBP3.56□□□□□ -1.84
USH2A-201ENST00000307340 TESK1Q15569 626 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 OR4C13Q8NGP0 309 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 MCHR2Q969V1 340 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 PKIGQ9Y2B9 76 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 ARHGAP21Q5T5U3 1957 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 ALPK2Q86TB3 2170 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 A0A1B0GW64 132 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 WNT9BO14905 357 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 TNFSF12O43508 249 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 MYBPHQ13203 477 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 PDPNQ86YL7 162 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 DNAJC5GQ8N7S2 189 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 OR2T10Q8NGZ9 312 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 OR52I2Q8NH67 350 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 C17orf51A8MQB3 221 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 RBFOX2O43251 390 aaKnown RBP eCLIP3.56□□□□□ -1.84
USH2A-201ENST00000307340 FCGR2CP31995 323 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 ID1P41134 155 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 SEC13P55735 322 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 KLF3P57682 345 aaPredicted RBP3.56□□□□□ -1.84
USH2A-201ENST00000307340 EBPQ15125 230 aaKnown RBP3.56□□□□□ -1.84
USH2A-201ENST00000307340 FAM71F2Q6NXP2 309 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 OR5AU1Q8NGC0 362 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 BSCL2Q96G97 398 aaPredicted RBP3.56□□□□□ -1.84
USH2A-201ENST00000307340 C4orf45Q96LM5 186 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 FOXB1Q99853 325 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 IKZF4Q9H2S9 585 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 HINT3Q9NQE9 182 aaKnown RBP3.56□□□□□ -1.84
USH2A-201ENST00000307340 CTXND1A0A1B0GTU2 59 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 DCTN6O00399 190 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 MEF2BQ02080 365 aaPredicted RBP3.56□□□□□ -1.84
USH2A-201ENST00000307340 C1orf100Q5SVJ3 147 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 CTHRC1Q96CG8 243 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 SHISA4Q96DD7 197 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 TM4SF19Q96DZ7 209 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 CRISPLD2Q9H0B8 497 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 A0A0A6YYC8 382 aaPredicted RBP3.56□□□□□ -1.84
USH2A-201ENST00000307340 I3L1I5 382 aaPredicted RBP3.56□□□□□ -1.84
USH2A-201ENST00000307340 UPK2O00526 184 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 CCL22O00626 93 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 NUDT3O95989 172 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 OR1C1Q15619 314 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 TCTN1Q2MV58 587 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 ATP5L2Q7Z4Y8 100 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 IL1F10Q8WWZ1 152 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 PDCD1LG2Q9BQ51 273 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 GSX1Q9H4S2 264 aaPredicted RBP3.56□□□□□ -1.84
USH2A-201ENST00000307340 METTL12A8MUP2 240 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 MASP2O00187 686 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 SFTA3P0C7M3 94 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 BMP5P22003 454 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 KIR3DL2P43630 455 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 CMC4P56277 68 aaPredicted RBP3.56□□□□□ -1.84
USH2A-201ENST00000307340 RND3P61587 244 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 C12orf57Q99622 126 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms