RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 LRP4O75096 1905 aa4.34□□□□□ -1.72
CSMD3-201ENST00000297405 MOSPD3O75425 235 aa4.34□□□□□ -1.72
CSMD3-201ENST00000297405 IGHA1P01876 353 aa4.34□□□□□ -1.72
CSMD3-201ENST00000297405 RCC1P18754 421 aaPredicted RBP4.34□□□□□ -1.72
CSMD3-201ENST00000297405 KCNMB1Q16558 191 aa4.34□□□□□ -1.72
CSMD3-201ENST00000297405 SPRED3Q2MJR0 410 aa4.34□□□□□ -1.72
CSMD3-201ENST00000297405 MUC20Q8N307 709 aaPredicted RBP4.34□□□□□ -1.72
CSMD3-201ENST00000297405 MS4A6AQ9H2W1 248 aa4.34□□□□□ -1.72
CSMD3-201ENST00000297405 TUBD1Q9UJT1 453 aa4.34□□□□□ -1.72
CSMD3-201ENST00000297405 HDGFL3Q9Y3E1 203 aa4.34□□□□□ -1.72
CSMD3-201ENST00000297405 MS4A18H0YCH9 400 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 FUT3P21217 361 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 KIR2DL1P43626 348 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-201ENST00000297405 KIR2DL2P43627 348 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-201ENST00000297405 ELAVL1Q15717 326 aaKnown RBP4.33□□□□□ -1.72
CSMD3-201ENST00000297405 MS4A18Q3C1V0 323 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 PLAC9Q5JTB6 97 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 CPEB2Q7Z5Q1 589 aaKnown RBP4.33□□□□□ -1.72
CSMD3-201ENST00000297405 LRTM2Q8N967 370 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 DTX3Q8N9I9 347 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 LMO3Q8TAP4 145 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 TMEM45BQ96B21 275 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 SLC25A2Q9BXI2 301 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 STARD5Q9NSY2 213 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 HRASLS2Q9NWW9 162 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 FBXL17Q9UF56 701 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 NEU3Q9UQ49 428 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 SIP14410 1827 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 J3QR06 171 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 S1PR2O95136 353 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 LINC00303Q3SY05 128 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 HIKESHIQ53FT3 197 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 NBPF12Q5TAG4 269 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-201ENST00000297405 NFAM1Q8NET5 270 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-201ENST00000297405 FGF13Q92913 245 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 TMEM101Q96IK0 257 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 MFRPQ9BY79 579 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 TIMM13Q9Y5L4 95 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-201ENST00000297405 SNURFLB1AK76 121 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 C1orf105O95561 183 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 TMEM50AO95807 157 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 ONECUT2O95948 504 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 ASIPP42127 132 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 SUMO3P55854 103 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-201ENST00000297405 TNFRSF9Q07011 255 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 RAB32Q13637 225 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 TBC1D28Q2M2D7 210 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 MRPL30Q8TCC3 161 aaKnown RBP4.33□□□□□ -1.72
CSMD3-201ENST00000297405 LRRC29Q8WV35 223 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 PIGCQ92535 297 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 HSD17B10Q99714 261 aaKnown RBP4.33□□□□□ -1.72
CSMD3-201ENST00000297405 HSPB9Q9BQS6 159 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 S1PR5Q9H228 398 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 TXNIPQ9H3M7 391 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 DNAJC4Q9NNZ3 241 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 IGLV3-22A0A075B6J6 115 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 HEPACAM2A8MVW5 462 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 OR9G9P0C7N8 305 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 COL8A1P27658 744 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 FZD5Q13467 585 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 DLEU7Q6UYE1 221 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 ASCL4Q6XD76 172 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 MYPOPQ86VE0 399 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-201ENST00000297405 WDR31Q8NA23 367 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 OR1L6Q8NGR2 347 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 SPXQ9BT56 116 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 B4GALT2O60909 372 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 FGF18O76093 207 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 MT-CO3P00414 261 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 IGHA2P01877 340 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 TP53I13Q8NBR0 393 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-201ENST00000297405 SMPXQ9UHP9 88 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 KCNMB2Q9Y691 235 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 AHDC1Q5TGY3 1603 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-201ENST00000297405 SLC5A10A0PJK1 596 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 MASP2O00187 686 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 APOMO95445 188 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 SEMG1P04279 462 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 POU3F1Q03052 451 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-201ENST00000297405 ASTLQ6HA08 431 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-201ENST00000297405 HMGN2P46Q86SG4 172 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 RIMKLAQ8IXN7 391 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 OR51H1Q8NH63 302 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 PELI1Q96FA3 418 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 CLEC2LP0C7M8 214 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 ID2Q02363 134 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 LINC00346Q8IVM7 164 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 TTC9BQ8N6N2 239 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 NAT6Q93015 286 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 AUNIPQ9H7T9 357 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 TXNRD2Q9NNW7 524 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 CDC14CA4D256 554 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 MBLAC1A4D2B0 266 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-201ENST00000297405 OR11H12B2RN74 326 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 PIAS2O75928 621 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 KBTBD11O94819 623 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 PRSS23O95084 383 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 ADRA2AP08913 450 aa4.33□□□□□ -1.72
CSMD3-201ENST00000297405 PXNP49023 591 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-201ENST00000297405 RPS26P62854 115 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms