RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 C9orf16Q9BUW7 83 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 TMBIM4Q9HC24 238 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 ATPIF1Q9UII2 106 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 C3orf18Q9UK00 162 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 LOXHD1Q8IVV2 1947 aa1.91□□□□□ -2.1
SCAMP1-205ENST00000614488 PLB1Q6P1J6 1458 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 A0A0A6YYD5 115 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 SEC14L6B5MCN3 397 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 NME4O00746 187 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 ALOX12BO75342 701 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 LYPLA2O95372 231 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 DEXIO95424 95 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 PSMG1O95456 288 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 GCGP01275 180 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 MMP7P09237 267 aaPredicted RBP1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 ZNF7P17097 686 aaPredicted RBP1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 TCP1P17987 556 aaKnown RBP1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 GABRG2P18507 467 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 ACTR1BP42025 376 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 DNASE1L1P49184 302 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 TGM4P49221 684 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 RPL14P50914 215 aaKnown RBP1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 ACTBP60709 375 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 DSTNP60981 165 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 ACTG1P63261 375 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 DR1Q01658 176 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 RGS21Q2M5E4 152 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 IDNKQ5T6J7 187 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 MTERF4Q7Z6M4 381 aaKnown RBP1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 ORMDL3Q8N138 153 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 TMEM156Q8N614 296 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 OR4K2Q8NGD2 314 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 OR5AR1Q8NGP9 310 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 OR2Y1Q8NGV0 311 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 CMTM2Q8TAZ6 248 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 SFXN5Q8TD22 340 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 DCAKDQ8WVC6 231 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 IFT81Q8WYA0 676 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 OR5P2Q8WZ92 322 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 SGTBQ96EQ0 304 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 STACQ99469 402 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 PDCD1LG2Q9BQ51 273 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 ZNF426Q9BUY5 554 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 EMC6Q9BV81 110 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 C1orf109Q9NX04 203 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 SDHAF2Q9NX18 166 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 RWDD2AQ9UIY3 292 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 SAMHD1Q9Y3Z3 626 aaKnown RBP1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 TBL2Q9Y4P3 447 aaKnown RBP1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 NISCHQ9Y2I1 1504 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 BRCA1P38398 1863 aaKnown RBP1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 ABCB11O95342 1321 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 RAD50Q92878 1312 aa1.9□□□□□ -2.11
SCAMP1-205ENST00000614488 M0R1X1 148 aa1.89□□□□□ -2.11
SCAMP1-205ENST00000614488 DFFAO00273 331 aa1.89□□□□□ -2.11
SCAMP1-205ENST00000614488 ATP8B1O43520 1251 aa1.89□□□□□ -2.11
SCAMP1-205ENST00000614488 IGHV1-46P01743 117 aa1.89□□□□□ -2.11
SCAMP1-205ENST00000614488 SERPINA6P08185 405 aa1.89□□□□□ -2.11
SCAMP1-205ENST00000614488 TACSTD2P09758 323 aa1.89□□□□□ -2.11
SCAMP1-205ENST00000614488 GIMD1P0DJR0 217 aa1.89□□□□□ -2.11
SCAMP1-205ENST00000614488 COX5BP10606 129 aa1.89□□□□□ -2.11
SCAMP1-205ENST00000614488 MYCNOSP40205 109 aa1.89□□□□□ -2.11
SCAMP1-205ENST00000614488 MAGEA2P43356 314 aa1.89□□□□□ -2.11
SCAMP1-205ENST00000614488 HCCSP53701 268 aa1.89□□□□□ -2.11
SCAMP1-205ENST00000614488 OR2B8PP59922 312 aa1.89□□□□□ -2.11
SCAMP1-205ENST00000614488 RPL10AP62906 217 aaKnown RBP1.89□□□□□ -2.11
SCAMP1-205ENST00000614488 RAB31Q13636 194 aa1.89□□□□□ -2.11
SCAMP1-205ENST00000614488 UAP1Q16222 522 aaPredicted RBP1.89□□□□□ -2.11
SCAMP1-205ENST00000614488 GOLGA7BQ2TAP0 167 aa1.89□□□□□ -2.11
SCAMP1-205ENST00000614488 CPTPQ5TA50 214 aa1.89□□□□□ -2.11
SCAMP1-205ENST00000614488 FAM104BQ5XKR9 115 aa1.89□□□□□ -2.11
SCAMP1-205ENST00000614488 WDR59Q6PJI9 974 aa1.89□□□□□ -2.11
SCAMP1-205ENST00000614488 ATPAF2Q8N5M1 289 aa1.89□□□□□ -2.11
SCAMP1-205ENST00000614488 ATP6V1C2Q8NEY4 427 aa1.89□□□□□ -2.11
SCAMP1-205ENST00000614488 KLF6Q99612 283 aaPredicted RBP1.89□□□□□ -2.11
SCAMP1-205ENST00000614488 GABRG3Q99928 467 aa1.89□□□□□ -2.11
SCAMP1-205ENST00000614488 DERL2Q9GZP9 239 aa1.89□□□□□ -2.11
SCAMP1-205ENST00000614488 PLEKHJ1Q9NW61 149 aa1.89□□□□□ -2.11
SCAMP1-205ENST00000614488 USE1Q9NZ43 259 aa1.89□□□□□ -2.11
SCAMP1-205ENST00000614488 FBXL3Q9UKT7 428 aa1.89□□□□□ -2.11
SCAMP1-205ENST00000614488 SNX24Q9Y343 169 aa1.89□□□□□ -2.11
SCAMP1-205ENST00000614488 POLR3HQ9Y535 204 aaPredicted RBP1.89□□□□□ -2.11
SCAMP1-205ENST00000614488 A0A1B0GTI1 187 aa1.88□□□□□ -2.11
SCAMP1-205ENST00000614488 ANKRD20A5PA0PJZ0 165 aa1.88□□□□□ -2.11
SCAMP1-205ENST00000614488 J3QKU1 62 aa1.88□□□□□ -2.11
SCAMP1-205ENST00000614488 J3QLI3 93 aa1.88□□□□□ -2.11
SCAMP1-205ENST00000614488 PLPP3O14495 311 aa1.88□□□□□ -2.11
SCAMP1-205ENST00000614488 ERI3O43414 337 aaKnown RBP1.88□□□□□ -2.11
SCAMP1-205ENST00000614488 MPZL2O60487 215 aa1.88□□□□□ -2.11
SCAMP1-205ENST00000614488 SLC16A7O60669 478 aa1.88□□□□□ -2.11
SCAMP1-205ENST00000614488 SHOX2O60902 331 aaPredicted RBP1.88□□□□□ -2.11
SCAMP1-205ENST00000614488 ATP6V1G2O95670 118 aa1.88□□□□□ -2.11
SCAMP1-205ENST00000614488 MAS1P04201 325 aa1.88□□□□□ -2.11
SCAMP1-205ENST00000614488 RPS17P08708 135 aaKnown RBP1.88□□□□□ -2.11
SCAMP1-205ENST00000614488 RPSAP08865 295 aaKnown RBP1.88□□□□□ -2.11
SCAMP1-205ENST00000614488 GNRHRP30968 328 aa1.88□□□□□ -2.11
SCAMP1-205ENST00000614488 APLNRP35414 380 aa1.88□□□□□ -2.11
SCAMP1-205ENST00000614488 RGS6P49758 472 aa1.88□□□□□ -2.11
SCAMP1-205ENST00000614488 AQP5P55064 265 aa1.88□□□□□ -2.11
SCAMP1-205ENST00000614488 OR10A3P58181 314 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms