RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 AADACL3Q5VUY0 350 aa13.93□□□□□ -0.18
RTN1-209ENST00000611068 TMEM225Q6GV28 225 aa13.93□□□□□ -0.18
RTN1-209ENST00000611068 ZNF283Q8N7M2 679 aa13.93□□□□□ -0.18
RTN1-209ENST00000611068 EXD3Q8N9H8 876 aa13.93□□□□□ -0.18
RTN1-209ENST00000611068 CNTNAP3Q9BZ76 1288 aa13.93□□□□□ -0.18
RTN1-209ENST00000611068 TXNIPQ9H3M7 391 aa13.93□□□□□ -0.18
RTN1-209ENST00000611068 PLEKHA2Q9HB19 425 aa13.93□□□□□ -0.18
RTN1-209ENST00000611068 LRFN1Q9P244 771 aa13.93□□□□□ -0.18
RTN1-209ENST00000611068 KLK13Q9UKR3 277 aa13.93□□□□□ -0.18
RTN1-209ENST00000611068 NPIPA1Q9UND3 350 aa13.93□□□□□ -0.18
RTN1-209ENST00000611068 COA3Q9Y2R0 106 aaPredicted RBP13.93□□□□□ -0.18
RTN1-209ENST00000611068 H0YL77 283 aa13.92□□□□□ -0.18
RTN1-209ENST00000611068 ATXN7O15265 892 aaPredicted RBP13.92□□□□□ -0.18
RTN1-209ENST00000611068 CD1AP06126 327 aa13.92□□□□□ -0.18
RTN1-209ENST00000611068 CD37P11049 281 aa13.92□□□□□ -0.18
RTN1-209ENST00000611068 TBPP20226 339 aa13.92□□□□□ -0.18
RTN1-209ENST00000611068 BIDP55957 195 aa13.92□□□□□ -0.18
RTN1-209ENST00000611068 MFSD8Q8NHS3 518 aa13.92□□□□□ -0.18
RTN1-209ENST00000611068 ELOVL1Q9BW60 279 aa13.92□□□□□ -0.18
RTN1-209ENST00000611068 DNAJC4Q9NNZ3 241 aa13.92□□□□□ -0.18
RTN1-209ENST00000611068 IKZF2Q9UKS7 526 aa13.92□□□□□ -0.18
RTN1-209ENST00000611068 TMEM210A6NLX4 147 aa13.92□□□□□ -0.18
RTN1-209ENST00000611068 IFNL4K9M1U5 179 aa13.92□□□□□ -0.18
RTN1-209ENST00000611068 DUS4LO95620 317 aaKnown RBP13.92□□□□□ -0.18
RTN1-209ENST00000611068 UCP2P55851 309 aa13.92□□□□□ -0.18
RTN1-209ENST00000611068 CARD18P57730 90 aa13.92□□□□□ -0.18
RTN1-209ENST00000611068 HSF1Q00613 529 aa13.92□□□□□ -0.18
RTN1-209ENST00000611068 OR5I1Q13606 314 aa13.92□□□□□ -0.18
RTN1-209ENST00000611068 Q499Y3 187 aa13.92□□□□□ -0.18
RTN1-209ENST00000611068 SLC22A6Q4U2R8 563 aa13.92□□□□□ -0.18
RTN1-209ENST00000611068 SLC22A25Q6T423 547 aa13.92□□□□□ -0.18
RTN1-209ENST00000611068 OR51A4Q8NGJ6 313 aa13.92□□□□□ -0.18
RTN1-209ENST00000611068 OR13D1Q8NGV5 346 aa13.92□□□□□ -0.18
RTN1-209ENST00000611068 UCN2Q96RP3 112 aa13.92□□□□□ -0.18
RTN1-209ENST00000611068 GAL3ST2Q9H3Q3 398 aa13.92□□□□□ -0.18
RTN1-209ENST00000611068 NCKAP5O14513 1909 aa13.91□□□□□ -0.18
RTN1-209ENST00000611068 PHF3Q92576 2039 aaKnown RBP13.91□□□□□ -0.18
RTN1-209ENST00000611068 RAB27BO00194 218 aa13.91□□□□□ -0.18
RTN1-209ENST00000611068 EIF1AYO14602 144 aaKnown RBP13.91□□□□□ -0.18
RTN1-209ENST00000611068 TNFSF11O14788 317 aa13.91□□□□□ -0.18
RTN1-209ENST00000611068 NKX2-8O15522 239 aa13.91□□□□□ -0.18
RTN1-209ENST00000611068 DFFBO76075 338 aa13.91□□□□□ -0.18
RTN1-209ENST00000611068 S100A7P31151 101 aa13.91□□□□□ -0.18
RTN1-209ENST00000611068 EIF1AXP47813 144 aaKnown RBP13.91□□□□□ -0.18
RTN1-209ENST00000611068 NOVA1P51513 510 aaKnown RBP13.91□□□□□ -0.18
RTN1-209ENST00000611068 ADAM8P78325 824 aa13.91□□□□□ -0.18
RTN1-209ENST00000611068 HAGHQ16775 308 aa13.91□□□□□ -0.18
RTN1-209ENST00000611068 WIPI1Q5MNZ9 446 aaPredicted RBP13.91□□□□□ -0.18
RTN1-209ENST00000611068 TMEM183AQ8IXX5 376 aa13.91□□□□□ -0.18
RTN1-209ENST00000611068 SUMF2Q8NBJ7 301 aa13.91□□□□□ -0.18
RTN1-209ENST00000611068 Q8NFD4 153 aa13.91□□□□□ -0.18
RTN1-209ENST00000611068 OR14L1PQ8NHC6 308 aa13.91□□□□□ -0.18
RTN1-209ENST00000611068 ZNF519Q8TB69 540 aa13.91□□□□□ -0.18
RTN1-209ENST00000611068 FAM122AQ96E09 287 aa13.91□□□□□ -0.18
RTN1-209ENST00000611068 SH2D2AQ9NP31 389 aa13.91□□□□□ -0.18
RTN1-209ENST00000611068 RAB22AQ9UL26 194 aa13.91□□□□□ -0.18
RTN1-209ENST00000611068 B9D1Q9UPM9 204 aa13.91□□□□□ -0.18
RTN1-209ENST00000611068 IGLV3-32A0A0A0MS00 114 aa13.91□□□□□ -0.18
RTN1-209ENST00000611068 CST4P01036 141 aa13.91□□□□□ -0.18
RTN1-209ENST00000611068 OR5H8P0DN80 308 aa13.91□□□□□ -0.18
RTN1-209ENST00000611068 EPHA1P21709 976 aa13.91□□□□□ -0.18
RTN1-209ENST00000611068 TFPI2P48307 235 aa13.91□□□□□ -0.18
RTN1-209ENST00000611068 CX3CR1P49238 355 aa13.91□□□□□ -0.18
RTN1-209ENST00000611068 S100A10P60903 97 aa13.91□□□□□ -0.18
RTN1-209ENST00000611068 PITPNC1Q9UKF7 332 aa13.91□□□□□ -0.18
RTN1-209ENST00000611068 C21orf140B9A014 251 aa13.9□□□□□ -0.18
RTN1-209ENST00000611068 LYL1P12980 280 aa13.9□□□□□ -0.18
RTN1-209ENST00000611068 UBE2KP61086 200 aa13.9□□□□□ -0.18
RTN1-209ENST00000611068 DLK1P80370 383 aa13.9□□□□□ -0.18
RTN1-209ENST00000611068 SSBP1Q04837 148 aaKnown RBP13.9□□□□□ -0.18
RTN1-209ENST00000611068 ABHD17BQ5VST6 288 aa13.9□□□□□ -0.18
RTN1-209ENST00000611068 VHLLQ6RSH7 139 aa13.9□□□□□ -0.18
RTN1-209ENST00000611068 ZNF705AQ6ZN79 300 aaPredicted RBP13.9□□□□□ -0.18
RTN1-209ENST00000611068 LINC00346Q8IVM7 164 aa13.9□□□□□ -0.18
RTN1-209ENST00000611068 OR10C1Q96KK4 312 aa13.9□□□□□ -0.18
RTN1-209ENST00000611068 B3GAT1Q9P2W7 334 aa13.9□□□□□ -0.18
RTN1-209ENST00000611068 GTF2A1LQ9UNN4 478 aa13.9□□□□□ -0.18
RTN1-209ENST00000611068 TMEM127O75204 238 aa13.9□□□□□ -0.18
RTN1-209ENST00000611068 BRS3P32247 399 aa13.9□□□□□ -0.18
RTN1-209ENST00000611068 PPP1CCP36873 323 aaKnown RBP13.9□□□□□ -0.18
RTN1-209ENST00000611068 CDKN1BP46527 198 aa13.9□□□□□ -0.18
RTN1-209ENST00000611068 BATFQ16520 125 aa13.9□□□□□ -0.18
RTN1-209ENST00000611068 RPUSD3Q6P087 351 aaKnown RBP13.9□□□□□ -0.18
RTN1-209ENST00000611068 SLC35E3Q7Z769 313 aa13.9□□□□□ -0.18
RTN1-209ENST00000611068 PPP1R14AQ96A00 147 aa13.9□□□□□ -0.18
RTN1-209ENST00000611068 FAM3DQ96BQ1 224 aa13.9□□□□□ -0.18
RTN1-209ENST00000611068 FAM210BQ96KR6 192 aa13.9□□□□□ -0.18
RTN1-209ENST00000611068 NCOR1P1Q9H4R4 102 aa13.9□□□□□ -0.18
RTN1-209ENST00000611068 FBXL17Q9UF56 701 aa13.9□□□□□ -0.18
RTN1-209ENST00000611068 OR4C45A6NMZ5 311 aa13.89□□□□□ -0.19
RTN1-209ENST00000611068 CELA3AP09093 270 aa13.89□□□□□ -0.19
RTN1-209ENST00000611068 CD82P27701 267 aa13.89□□□□□ -0.19
RTN1-209ENST00000611068 GGTLC2Q14390 218 aa13.89□□□□□ -0.19
RTN1-209ENST00000611068 RPS4Y2Q8TD47 263 aa13.89□□□□□ -0.19
RTN1-209ENST00000611068 MRPL22Q9NWU5 206 aaKnown RBP13.89□□□□□ -0.19
RTN1-209ENST00000611068 RTTNQ86VV8 2226 aa13.89□□□□□ -0.19
RTN1-209ENST00000611068 TMEM238LA0A1B0GVL6 79 aa13.89□□□□□ -0.19
RTN1-209ENST00000611068 FAM166BA8MTA8 275 aa13.89□□□□□ -0.19
RTN1-209ENST00000611068 CNOT4O95628 575 aaKnown RBP13.89□□□□□ -0.19
RTN1-209ENST00000611068 WT1P19544 449 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 184.5 ms