RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 DYNLT3P51808 116 aa13.86□□□□□ -0.19
RETREG3-210ENST00000590541 ATP1B3P54709 279 aa13.86□□□□□ -0.19
RETREG3-210ENST00000590541 MRPL28Q13084 256 aaKnown RBP13.86□□□□□ -0.19
RETREG3-210ENST00000590541 RNF144BQ7Z419 303 aa13.86□□□□□ -0.19
RETREG3-210ENST00000590541 ENTHD1Q8IYW4 607 aa13.86□□□□□ -0.19
RETREG3-210ENST00000590541 PQLC1Q8N2U9 271 aa13.86□□□□□ -0.19
RETREG3-210ENST00000590541 OR4M1Q8NGD0 313 aa13.86□□□□□ -0.19
RETREG3-210ENST00000590541 NEK6Q9HC98 313 aa13.86□□□□□ -0.19
RETREG3-210ENST00000590541 FRRS1LQ9P0K9 344 aa13.86□□□□□ -0.19
RETREG3-210ENST00000590541 C3orf84H3BNL1 204 aa13.85□□□□□ -0.19
RETREG3-210ENST00000590541 K7N7A8 449 aa13.85□□□□□ -0.19
RETREG3-210ENST00000590541 F2RL2O00254 374 aa13.85□□□□□ -0.19
RETREG3-210ENST00000590541 TK1P04183 234 aa13.85□□□□□ -0.19
RETREG3-210ENST00000590541 NHLRC4P0CG21 123 aaPredicted RBP13.85□□□□□ -0.19
RETREG3-210ENST00000590541 ZNF20P17024 532 aa13.85□□□□□ -0.19
RETREG3-210ENST00000590541 GABRB1P18505 474 aa13.85□□□□□ -0.19
RETREG3-210ENST00000590541 DLX6P56179 175 aa13.85□□□□□ -0.19
RETREG3-210ENST00000590541 OR12D2P58182 307 aa13.85□□□□□ -0.19
RETREG3-210ENST00000590541 GALEQ14376 348 aa13.85□□□□□ -0.19
RETREG3-210ENST00000590541 CENPVQ7Z7K6 275 aaPredicted RBP13.85□□□□□ -0.19
RETREG3-210ENST00000590541 SYS1Q8N2H4 156 aa13.85□□□□□ -0.19
RETREG3-210ENST00000590541 RHOXF1Q8NHV9 184 aa13.85□□□□□ -0.19
RETREG3-210ENST00000590541 RNF166Q96A37 237 aaPredicted RBP13.85□□□□□ -0.19
RETREG3-210ENST00000590541 SPSB1Q96BD6 273 aa13.85□□□□□ -0.19
RETREG3-210ENST00000590541 RDH12Q96NR8 316 aa13.85□□□□□ -0.19
RETREG3-210ENST00000590541 MBOAT4Q96T53 435 aa13.85□□□□□ -0.19
RETREG3-210ENST00000590541 OR14J1Q9UGF5 321 aa13.85□□□□□ -0.19
RETREG3-210ENST00000590541 HHLA2Q9UM44 414 aa13.85□□□□□ -0.19
RETREG3-210ENST00000590541 LOC100130705A0A1B0GUX0 176 aa13.84□□□□□ -0.19
RETREG3-210ENST00000590541 C17orf98A8MV24 154 aa13.84□□□□□ -0.19
RETREG3-210ENST00000590541 RBP4P02753 201 aa13.84□□□□□ -0.19
RETREG3-210ENST00000590541 DBTP11182 482 aaKnown RBP13.84□□□□□ -0.19
RETREG3-210ENST00000590541 ZNF91Q05481 1191 aa13.84□□□□□ -0.19
RETREG3-210ENST00000590541 RAB40BQ12829 278 aa13.84□□□□□ -0.19
RETREG3-210ENST00000590541 DCTN2Q13561 401 aaKnown RBP13.84□□□□□ -0.19
RETREG3-210ENST00000590541 ZNF626Q68DY1 528 aa13.84□□□□□ -0.19
RETREG3-210ENST00000590541 C10orf99Q6UWK7 81 aa13.84□□□□□ -0.19
RETREG3-210ENST00000590541 LHFPL2Q6ZUX7 228 aa13.84□□□□□ -0.19
RETREG3-210ENST00000590541 OR11H6Q8NGC7 330 aa13.84□□□□□ -0.19
RETREG3-210ENST00000590541 DPF1Q92782 380 aa13.84□□□□□ -0.19
RETREG3-210ENST00000590541 LGALS12Q96DT0 336 aa13.84□□□□□ -0.19
RETREG3-210ENST00000590541 GPR61Q9BZJ8 451 aa13.84□□□□□ -0.19
RETREG3-210ENST00000590541 RHOFQ9HBH0 211 aa13.84□□□□□ -0.19
RETREG3-210ENST00000590541 MTCH1Q9NZJ7 389 aa13.84□□□□□ -0.19
RETREG3-210ENST00000590541 RPL36Q9Y3U8 105 aaKnown RBP13.84□□□□□ -0.19
RETREG3-210ENST00000590541 IGKV1-27A0A075B6S5 117 aa13.83□□□□□ -0.2
RETREG3-210ENST00000590541 J3QLW9 94 aa13.83□□□□□ -0.2
RETREG3-210ENST00000590541 CLIC3O95833 236 aa13.83□□□□□ -0.2
RETREG3-210ENST00000590541 ZNF19P17023 458 aa13.83□□□□□ -0.2
RETREG3-210ENST00000590541 ATF1P18846 271 aa13.83□□□□□ -0.2
RETREG3-210ENST00000590541 MTCP1P56278 107 aa13.83□□□□□ -0.2
RETREG3-210ENST00000590541 ALKBH1Q13686 389 aaKnown RBP13.83□□□□□ -0.2
RETREG3-210ENST00000590541 KLHL22Q53GT1 634 aa13.83□□□□□ -0.2
RETREG3-210ENST00000590541 ETV3LQ6ZN32 361 aa13.83□□□□□ -0.2
RETREG3-210ENST00000590541 SLC25A26Q70HW3 274 aa13.83□□□□□ -0.2
RETREG3-210ENST00000590541 MRPL41Q8IXM3 137 aaKnown RBP13.83□□□□□ -0.2
RETREG3-210ENST00000590541 RDH10Q8IZV5 341 aa13.83□□□□□ -0.2
RETREG3-210ENST00000590541 ASCC1Q8N9N2 400 aaKnown RBP13.83□□□□□ -0.2
RETREG3-210ENST00000590541 FGGYQ96C11 551 aa13.83□□□□□ -0.2
RETREG3-210ENST00000590541 ADAT3Q96EY9 351 aaPredicted RBP13.83□□□□□ -0.2
RETREG3-210ENST00000590541 PELI1Q96FA3 418 aa13.83□□□□□ -0.2
RETREG3-210ENST00000590541 C4orf36Q96KX1 117 aa13.83□□□□□ -0.2
RETREG3-210ENST00000590541 SNX22Q96L94 193 aa13.83□□□□□ -0.2
RETREG3-210ENST00000590541 ALG8Q9BVK2 526 aa13.83□□□□□ -0.2
RETREG3-210ENST00000590541 MRPS18AQ9NVS2 196 aaKnown RBP13.83□□□□□ -0.2
RETREG3-210ENST00000590541 FAM118AQ9NWS6 357 aa13.83□□□□□ -0.2
RETREG3-210ENST00000590541 GLS2Q9UI32 602 aa13.83□□□□□ -0.2
RETREG3-210ENST00000590541 TRBV2A0A0J9YWF9 115 aa13.82□□□□□ -0.2
RETREG3-210ENST00000590541 FAM90A22PA8MWA6 464 aa13.82□□□□□ -0.2
RETREG3-210ENST00000590541 H3BSH0 61 aa13.82□□□□□ -0.2
RETREG3-210ENST00000590541 IGHA1P01876 353 aa13.82□□□□□ -0.2
RETREG3-210ENST00000590541 MT-ND2P03891 347 aa13.82□□□□□ -0.2
RETREG3-210ENST00000590541 CCDC159P0C7I6 412 aa13.82□□□□□ -0.2
RETREG3-210ENST00000590541 OCM2P0CE71 109 aa13.82□□□□□ -0.2
RETREG3-210ENST00000590541 OCMP0CE72 109 aaPredicted RBP13.82□□□□□ -0.2
RETREG3-210ENST00000590541 CEBPDP49716 269 aaPredicted RBP13.82□□□□□ -0.2
RETREG3-210ENST00000590541 NANOS3P60323 173 aaKnown RBP13.82□□□□□ -0.2
RETREG3-210ENST00000590541 MEF2CQ06413 473 aaPredicted RBP13.82□□□□□ -0.2
RETREG3-210ENST00000590541 ZSCAN26Q16670 478 aa13.82□□□□□ -0.2
RETREG3-210ENST00000590541 NKAPLQ5M9Q1 402 aa13.82□□□□□ -0.2
RETREG3-210ENST00000590541 LPCAT4Q643R3 524 aa13.82□□□□□ -0.2
RETREG3-210ENST00000590541 GDPD3Q7L5L3 318 aa13.82□□□□□ -0.2
RETREG3-210ENST00000590541 OR8H2Q8N162 312 aa13.82□□□□□ -0.2
RETREG3-210ENST00000590541 ZNF676Q8N7Q3 588 aa13.82□□□□□ -0.2
RETREG3-210ENST00000590541 ZNF555Q8NEP9 628 aa13.82□□□□□ -0.2
RETREG3-210ENST00000590541 OR13D1Q8NGV5 346 aa13.82□□□□□ -0.2
RETREG3-210ENST00000590541 STMN2Q93045 179 aa13.82□□□□□ -0.2
RETREG3-210ENST00000590541 SLAMF9Q96A28 289 aa13.82□□□□□ -0.2
RETREG3-210ENST00000590541 SLC29A1Q99808 456 aa13.82□□□□□ -0.2
RETREG3-210ENST00000590541 C8orf4Q9NR00 106 aa13.82□□□□□ -0.2
RETREG3-210ENST00000590541 PCDHGB5Q9Y5G0 923 aa13.82□□□□□ -0.2
RETREG3-210ENST00000590541 HILPDAQ9Y5L2 63 aa13.82□□□□□ -0.2
RETREG3-210ENST00000590541 TENM2Q9NT68 2774 aa13.82□□□□□ -0.2
RETREG3-210ENST00000590541 TMEM212A6NML5 194 aa13.81□□□□□ -0.2
RETREG3-210ENST00000590541 OR4C45A6NMZ5 311 aa13.81□□□□□ -0.2
RETREG3-210ENST00000590541 ZNF737O75373 536 aa13.81□□□□□ -0.2
RETREG3-210ENST00000590541 PIPP12273 146 aaPredicted RBP13.81□□□□□ -0.2
RETREG3-210ENST00000590541 AZGP1P25311 298 aaKnown RBP13.81□□□□□ -0.2
RETREG3-210ENST00000590541 ZNF146Q15072 292 aa13.81□□□□□ -0.2
RETREG3-210ENST00000590541 SPIN3Q5JUX0 258 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms