RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 FAM110BQ8TC76 370 aa6.57□□□□□ -1.36
HDAC3-216ENST00000523088 DYRK2Q92630 601 aa6.57□□□□□ -1.36
HDAC3-216ENST00000523088 APOBEC3DQ96AK3 386 aaPredicted RBP6.57□□□□□ -1.36
HDAC3-216ENST00000523088 UPRTQ96BW1 309 aa6.57□□□□□ -1.36
HDAC3-216ENST00000523088 KCTD12Q96CX2 325 aaKnown RBP6.57□□□□□ -1.36
HDAC3-216ENST00000523088 BBC3Q96PG8 261 aaPredicted RBP6.57□□□□□ -1.36
HDAC3-216ENST00000523088 P2RX4Q99571 388 aa6.57□□□□□ -1.36
HDAC3-216ENST00000523088 CDCA4Q9BXL8 241 aa6.57□□□□□ -1.36
HDAC3-216ENST00000523088 OR52D1Q9H346 318 aa6.57□□□□□ -1.36
HDAC3-216ENST00000523088 ZNF395Q9H8N7 513 aaPredicted RBP6.57□□□□□ -1.36
HDAC3-216ENST00000523088 ELOVL3Q9HB03 270 aa6.57□□□□□ -1.36
HDAC3-216ENST00000523088 RDH14Q9HBH5 336 aa6.57□□□□□ -1.36
HDAC3-216ENST00000523088 MMP26Q9NRE1 261 aa6.57□□□□□ -1.36
HDAC3-216ENST00000523088 BET1LQ9NYM9 111 aa6.57□□□□□ -1.36
HDAC3-216ENST00000523088 KLRF1Q9NZS2 232 aa6.57□□□□□ -1.36
HDAC3-216ENST00000523088 TNFSF18Q9UNG2 199 aa6.57□□□□□ -1.36
HDAC3-216ENST00000523088 CMAHPQ9Y471 501 aa6.57□□□□□ -1.36
HDAC3-216ENST00000523088 V9GYY9 64 aa6.57□□□□□ -1.36
HDAC3-216ENST00000523088 A0A0D9SG52 128 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 A0A1W2PRD5 423 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 GAGE12BA1L429 117 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 FIGNL2A6NMB9 653 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 SLC1A7O00341 560 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 DCTN6O00399 190 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 GALR3O60755 368 aaPredicted RBP6.56□□□□□ -1.36
HDAC3-216ENST00000523088 MPZL1O95297 269 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 ACP2P11117 423 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 HGFP14210 728 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 PGAM2P15259 253 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 ATP6V0CP27449 155 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 SHC1P29353 583 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 ZNF84P51523 738 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 WNT3AP56704 352 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 RAB38P57729 211 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 CLRN1P58418 232 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 SEC61A1P61619 476 aaKnown RBP6.56□□□□□ -1.36
HDAC3-216ENST00000523088 YBX1P67809 324 aaKnown RBP6.56□□□□□ -1.36
HDAC3-216ENST00000523088 RPL24P83731 157 aaKnown RBP6.56□□□□□ -1.36
HDAC3-216ENST00000523088 TBR1Q16650 682 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 CCSMST1Q4G0I0 132 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 LRRTM1Q86UE6 522 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 OR8I2Q8N0Y5 310 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 ZNF843Q8N446 348 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 OR5AP2Q8NGF4 316 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 OR1S2Q8NGQ3 325 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 OR1N2Q8NGR9 330 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 OR1J4Q8NGS1 313 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 OR2T35Q8NGX2 323 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 SYNPRQ8TBG9 265 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 PROKR1Q8TCW9 393 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 POP5Q969H6 163 aaKnown RBP6.56□□□□□ -1.36
HDAC3-216ENST00000523088 TMEM106AQ96A25 262 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 ZG16BQ96DA0 208 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 SMIM19Q96E16 107 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 BTF3L4Q96K17 158 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 YPEL4Q96NS1 127 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 MUS81Q96NY9 551 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 SOSTQ9BQB4 213 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 HSPB9Q9BQS6 159 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 ABHD14AQ9BUJ0 271 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 ABHD6Q9BV23 337 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 VN1R1Q9GZP7 353 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 PLK3Q9H4B4 646 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 ACOT13Q9NPJ3 140 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 EXOSC3Q9NQT5 275 aaKnown RBP6.56□□□□□ -1.36
HDAC3-216ENST00000523088 RAB6BQ9NRW1 208 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 ASF1BQ9NVP2 202 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 TAS2R8Q9NYW2 309 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 NAT8BQ9UHF3 227 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 MRPS28Q9Y2Q9 187 aaKnown RBP6.56□□□□□ -1.36
HDAC3-216ENST00000523088 MRPS16Q9Y3D3 137 aaKnown RBP6.56□□□□□ -1.36
HDAC3-216ENST00000523088 ETV7Q9Y603 341 aa6.56□□□□□ -1.36
HDAC3-216ENST00000523088 HELZ2Q9BYK8 2649 aaKnown RBP6.56□□□□□ -1.36
HDAC3-216ENST00000523088 TMEM189A5PLL7 270 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 SH2D7A6NKC9 451 aaPredicted RBP6.55□□□□□ -1.36
HDAC3-216ENST00000523088 PLPP3O14495 311 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 CTDSPLO15194 276 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 MPPED1O15442 326 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 ENTPD6O75354 484 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 HSBP1O75506 76 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 OR2J3O76001 311 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 OR2A4O95047 310 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 SIX6O95475 246 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 F12P00748 615 aaPredicted RBP6.55□□□□□ -1.36
HDAC3-216ENST00000523088 MBPP02686 304 aaPredicted RBP6.55□□□□□ -1.36
HDAC3-216ENST00000523088 HIST1H2ABP04908 130 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 SOD3P08294 240 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 FGF3P11487 239 aaPredicted RBP6.55□□□□□ -1.36
HDAC3-216ENST00000523088 CXCL2P19875 107 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 CD68P34810 354 aaPredicted RBP6.55□□□□□ -1.36
HDAC3-216ENST00000523088 KIR2DS4P43632 304 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 XCR1P46094 333 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 SULT1A1P50225 295 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 SULT1A2P50226 295 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 S100A10P60903 97 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 PAFAH1B2P68402 229 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 SLC35A2P78381 396 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 MFGE8Q08431 387 aaPredicted RBP6.55□□□□□ -1.36
HDAC3-216ENST00000523088 PJVKQ0ZLH3 352 aa6.55□□□□□ -1.36
HDAC3-216ENST00000523088 ST3GAL4Q11206 333 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms