RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 WIF1Q9Y5W5 379 aa3.37□□□□□ -1.87
HMGB1P3-201ENST00000502802 PRRC2BQ5JSZ5 2229 aaKnown RBP3.37□□□□□ -1.87
HMGB1P3-201ENST00000502802 ROBO3Q96MS0 1386 aa3.37□□□□□ -1.87
HMGB1P3-201ENST00000502802 IGKV6D-21A0A0A0MT36 114 aa3.36□□□□□ -1.87
HMGB1P3-201ENST00000502802 IQCF5A8MTL0 148 aa3.36□□□□□ -1.87
HMGB1P3-201ENST00000502802 H0YJW9 148 aa3.36□□□□□ -1.87
HMGB1P3-201ENST00000502802 hCG_2039718K7EN88 272 aa3.36□□□□□ -1.87
HMGB1P3-201ENST00000502802 EIF1BO60739 113 aaKnown RBP3.36□□□□□ -1.87
HMGB1P3-201ENST00000502802 FOXH1O75593 365 aa3.36□□□□□ -1.87
HMGB1P3-201ENST00000502802 IGHV3-11P01762 117 aa3.36□□□□□ -1.87
HMGB1P3-201ENST00000502802 HLA-DQA1P01909 254 aa3.36□□□□□ -1.87
HMGB1P3-201ENST00000502802 MT-ND4P03905 459 aa3.36□□□□□ -1.87
HMGB1P3-201ENST00000502802 EIF1P41567 113 aaKnown RBP3.36□□□□□ -1.87
HMGB1P3-201ENST00000502802 ERFP50548 548 aa3.36□□□□□ -1.87
HMGB1P3-201ENST00000502802 DSTNP60981 165 aa3.36□□□□□ -1.87
HMGB1P3-201ENST00000502802 SAXO2Q658L1 398 aa3.36□□□□□ -1.87
HMGB1P3-201ENST00000502802 ZFP2Q6ZN57 461 aa3.36□□□□□ -1.87
HMGB1P3-201ENST00000502802 SSX6Q7RTT6 188 aa3.36□□□□□ -1.87
HMGB1P3-201ENST00000502802 SH2D6Q7Z4S9 175 aa3.36□□□□□ -1.87
HMGB1P3-201ENST00000502802 WDR86Q86TI4 376 aa3.36□□□□□ -1.87
HMGB1P3-201ENST00000502802 DRAM1Q8N682 238 aa3.36□□□□□ -1.87
HMGB1P3-201ENST00000502802 CDRT4Q8N9R6 151 aa3.36□□□□□ -1.87
HMGB1P3-201ENST00000502802 CYB561A3Q8NBI2 242 aa3.36□□□□□ -1.87
HMGB1P3-201ENST00000502802 MNS1Q8NEH6 495 aa3.36□□□□□ -1.87
HMGB1P3-201ENST00000502802 OR10G2Q8NGC3 310 aa3.36□□□□□ -1.87
HMGB1P3-201ENST00000502802 DOK4Q8TEW6 326 aa3.36□□□□□ -1.87
HMGB1P3-201ENST00000502802 CYYR1Q96J86 154 aa3.36□□□□□ -1.87
HMGB1P3-201ENST00000502802 C1orf198Q9H425 327 aa3.36□□□□□ -1.87
HMGB1P3-201ENST00000502802 WDR55Q9H6Y2 383 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P3-201ENST00000502802 ACOT13Q9NPJ3 140 aa3.36□□□□□ -1.87
HMGB1P3-201ENST00000502802 TANC1Q9C0D5 1861 aa3.36□□□□□ -1.87
HMGB1P3-201ENST00000502802 MYO7AQ13402 2215 aa3.36□□□□□ -1.87
HMGB1P3-201ENST00000502802 WDR87Q6ZQQ6 2873 aa3.36□□□□□ -1.87
HMGB1P3-201ENST00000502802 MICAL3Q7RTP6 2002 aa3.36□□□□□ -1.87
HMGB1P3-201ENST00000502802 NLRC5Q86WI3 1866 aa3.35□□□□□ -1.87
HMGB1P3-201ENST00000502802 TMEM131Q92545 1883 aa3.35□□□□□ -1.87
HMGB1P3-201ENST00000502802 ATG2AQ2TAZ0 1938 aa3.35□□□□□ -1.87
HMGB1P3-201ENST00000502802 TRAV8-6A0A0B4J262 113 aa3.35□□□□□ -1.87
HMGB1P3-201ENST00000502802 SLC5A10A0PJK1 596 aa3.35□□□□□ -1.87
HMGB1P3-201ENST00000502802 C5orf63A6NC05 138 aa3.35□□□□□ -1.87
HMGB1P3-201ENST00000502802 M0R1X1 148 aa3.35□□□□□ -1.87
HMGB1P3-201ENST00000502802 ENSAO43768 121 aaKnown RBP3.35□□□□□ -1.87
HMGB1P3-201ENST00000502802 CTDNEP1O95476 244 aa3.35□□□□□ -1.87
HMGB1P3-201ENST00000502802 PAX6P26367 422 aa3.35□□□□□ -1.87
HMGB1P3-201ENST00000502802 OR12D2P58182 307 aa3.35□□□□□ -1.87
HMGB1P3-201ENST00000502802 SYT6Q5T7P8 510 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P3-201ENST00000502802 HHATQ5VTY9 493 aa3.35□□□□□ -1.87
HMGB1P3-201ENST00000502802 RESP18Q5W5W9 173 aa3.35□□□□□ -1.87
HMGB1P3-201ENST00000502802 Q6P435 159 aa3.35□□□□□ -1.87
HMGB1P3-201ENST00000502802 Q6ZR03 302 aa3.35□□□□□ -1.87
HMGB1P3-201ENST00000502802 Q6ZSR6 202 aa3.35□□□□□ -1.87
HMGB1P3-201ENST00000502802 SETD3Q86TU7 594 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P3-201ENST00000502802 KRTAP11-1Q8IUC1 163 aa3.35□□□□□ -1.87
HMGB1P3-201ENST00000502802 NELFCDQ8IXH7 590 aa3.35□□□□□ -1.87
HMGB1P3-201ENST00000502802 OR4M1Q8NGD0 313 aa3.35□□□□□ -1.87
HMGB1P3-201ENST00000502802 ENKURQ8TC29 256 aa3.35□□□□□ -1.87
HMGB1P3-201ENST00000502802 NT5CQ8TCD5 201 aa3.35□□□□□ -1.87
HMGB1P3-201ENST00000502802 C18orf15Q96N68 181 aa3.35□□□□□ -1.87
HMGB1P3-201ENST00000502802 CTRCQ99895 268 aa3.35□□□□□ -1.87
HMGB1P3-201ENST00000502802 PDCD1LG2Q9BQ51 273 aa3.35□□□□□ -1.87
HMGB1P3-201ENST00000502802 PRORYQ9H606 182 aa3.35□□□□□ -1.87
HMGB1P3-201ENST00000502802 PLEKHA1Q9HB21 404 aa3.35□□□□□ -1.87
HMGB1P3-201ENST00000502802 SPACA1Q9HBV2 294 aa3.35□□□□□ -1.87
HMGB1P3-201ENST00000502802 C8orf17Q9NRJ1 99 aa3.35□□□□□ -1.87
HMGB1P3-201ENST00000502802 RHBDL2Q9NX52 303 aa3.35□□□□□ -1.87
HMGB1P3-201ENST00000502802 PLIN4Q96Q06 1357 aa3.35□□□□□ -1.87
HMGB1P3-201ENST00000502802 IGLV3-16A0A075B6K0 115 aa3.34□□□□□ -1.87
HMGB1P3-201ENST00000502802 IGHV3-72A0A0B4J1Y9 119 aa3.34□□□□□ -1.87
HMGB1P3-201ENST00000502802 OR5H1A6NKK0 313 aa3.34□□□□□ -1.87
HMGB1P3-201ENST00000502802 F8VP50 259 aa3.34□□□□□ -1.87
HMGB1P3-201ENST00000502802 SNAI2O43623 268 aa3.34□□□□□ -1.87
HMGB1P3-201ENST00000502802 VAMP5O95183 116 aa3.34□□□□□ -1.87
HMGB1P3-201ENST00000502802 NQO2P16083 231 aa3.34□□□□□ -1.87
HMGB1P3-201ENST00000502802 SNAP25P60880 206 aa3.34□□□□□ -1.87
HMGB1P3-201ENST00000502802 IL5RAQ01344 420 aa3.34□□□□□ -1.87
HMGB1P3-201ENST00000502802 STX4Q12846 297 aa3.34□□□□□ -1.87
HMGB1P3-201ENST00000502802 TOMM34Q15785 309 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P3-201ENST00000502802 PRSS8Q16651 343 aa3.34□□□□□ -1.87
HMGB1P3-201ENST00000502802 CDNFQ49AH0 187 aa3.34□□□□□ -1.87
HMGB1P3-201ENST00000502802 RNASE13Q5GAN3 156 aaKnown RBP3.34□□□□□ -1.87
HMGB1P3-201ENST00000502802 TTC32Q5I0X7 151 aa3.34□□□□□ -1.87
HMGB1P3-201ENST00000502802 NANOGP8Q6NSW7 305 aa3.34□□□□□ -1.87
HMGB1P3-201ENST00000502802 FAM19A1Q7Z5A9 133 aa3.34□□□□□ -1.87
HMGB1P3-201ENST00000502802 ENTHD1Q8IYW4 607 aa3.34□□□□□ -1.87
HMGB1P3-201ENST00000502802 TMEM256Q8N2U0 113 aa3.34□□□□□ -1.87
HMGB1P3-201ENST00000502802 C17orf78Q8N4C9 275 aa3.34□□□□□ -1.87
HMGB1P3-201ENST00000502802 ATPAF2Q8N5M1 289 aa3.34□□□□□ -1.87
HMGB1P3-201ENST00000502802 ZNF645Q8N7E2 425 aa3.34□□□□□ -1.87
HMGB1P3-201ENST00000502802 ZNF75AQ96N20 296 aa3.34□□□□□ -1.87
HMGB1P3-201ENST00000502802 FOPNLQ96NB1 174 aa3.34□□□□□ -1.87
HMGB1P3-201ENST00000502802 ALS2CR12Q96Q35 445 aa3.34□□□□□ -1.87
HMGB1P3-201ENST00000502802 VAT1Q99536 393 aa3.34□□□□□ -1.87
HMGB1P3-201ENST00000502802 CDX2Q99626 313 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P3-201ENST00000502802 SLC38A1Q9H2H9 487 aa3.34□□□□□ -1.87
HMGB1P3-201ENST00000502802 VCXQ9H320 206 aa3.34□□□□□ -1.87
HMGB1P3-201ENST00000502802 RAB26Q9ULW5 256 aa3.34□□□□□ -1.87
HMGB1P3-201ENST00000502802 PPIL1Q9Y3C6 166 aa3.34□□□□□ -1.87
HMGB1P3-201ENST00000502802 SIP14410 1827 aa3.34□□□□□ -1.87
HMGB1P3-201ENST00000502802 MYH9P35579 1960 aaKnown RBP3.34□□□□□ -1.88
HMGB1P3-201ENST00000502802 A0A0D9SFI3 127 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms