RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 SHBQ15464 509 aa11.25□□□□□ -0.61
PDZRN3-205ENST00000466780 C9orf152Q5JTZ5 239 aa11.25□□□□□ -0.61
PDZRN3-205ENST00000466780 ASCL4Q6XD76 172 aa11.25□□□□□ -0.61
PDZRN3-205ENST00000466780 CPEB2Q7Z5Q1 589 aaKnown RBP11.25□□□□□ -0.61
PDZRN3-205ENST00000466780 TMEM123Q8N131 208 aa11.25□□□□□ -0.61
PDZRN3-205ENST00000466780 Q8WTZ3 238 aa11.25□□□□□ -0.61
PDZRN3-205ENST00000466780 SYT3Q9BQG1 590 aa11.25□□□□□ -0.61
PDZRN3-205ENST00000466780 DOK5Q9P104 306 aa11.25□□□□□ -0.61
PDZRN3-205ENST00000466780 SLC34A2O95436 690 aa11.25□□□□□ -0.61
PDZRN3-205ENST00000466780 ONECUT2O95948 504 aa11.25□□□□□ -0.61
PDZRN3-205ENST00000466780 UCP3P55916 312 aa11.25□□□□□ -0.61
PDZRN3-205ENST00000466780 ELOBQ15370 118 aa11.25□□□□□ -0.61
PDZRN3-205ENST00000466780 KMT5CQ86Y97 462 aa11.25□□□□□ -0.61
PDZRN3-205ENST00000466780 SUMF1Q8NBK3 374 aa11.25□□□□□ -0.61
PDZRN3-205ENST00000466780 SPACA9Q96E40 222 aaPredicted RBP11.25□□□□□ -0.61
PDZRN3-205ENST00000466780 UCN2Q96RP3 112 aa11.25□□□□□ -0.61
PDZRN3-205ENST00000466780 RASL10BQ96S79 203 aa11.25□□□□□ -0.61
PDZRN3-205ENST00000466780 GLB1P16278 677 aa11.24□□□□□ -0.61
PDZRN3-205ENST00000466780 CRYGSP22914 178 aa11.24□□□□□ -0.61
PDZRN3-205ENST00000466780 OMGP23515 440 aa11.24□□□□□ -0.61
PDZRN3-205ENST00000466780 TAGLN2P37802 199 aaKnown RBP11.24□□□□□ -0.61
PDZRN3-205ENST00000466780 ODF3L1Q8IXM7 274 aa11.24□□□□□ -0.61
PDZRN3-205ENST00000466780 CCDC54Q8NEL0 328 aa11.24□□□□□ -0.61
PDZRN3-205ENST00000466780 SPTSSAQ969W0 71 aa11.24□□□□□ -0.61
PDZRN3-205ENST00000466780 LIPGQ9Y5X9 500 aa11.24□□□□□ -0.61
PDZRN3-205ENST00000466780 WRBO00258 174 aa11.24□□□□□ -0.61
PDZRN3-205ENST00000466780 YKT6O15498 198 aa11.24□□□□□ -0.61
PDZRN3-205ENST00000466780 PITX3O75364 302 aa11.24□□□□□ -0.61
PDZRN3-205ENST00000466780 NR2C1P13056 603 aa11.24□□□□□ -0.61
PDZRN3-205ENST00000466780 CEBPGP53567 150 aa11.24□□□□□ -0.61
PDZRN3-205ENST00000466780 ERVFRD-1P60508 538 aa11.24□□□□□ -0.61
PDZRN3-205ENST00000466780 RABEPKQ7Z6M1 372 aa11.24□□□□□ -0.61
PDZRN3-205ENST00000466780 SLC25A45Q8N413 288 aa11.24□□□□□ -0.61
PDZRN3-205ENST00000466780 OR14L1PQ8NHC6 308 aa11.24□□□□□ -0.61
PDZRN3-205ENST00000466780 ZNF286AQ9HBT8 521 aa11.24□□□□□ -0.61
PDZRN3-205ENST00000466780 GLRX2Q9NS18 164 aa11.24□□□□□ -0.61
PDZRN3-205ENST00000466780 KIAA1456Q9P272 454 aa11.24□□□□□ -0.61
PDZRN3-205ENST00000466780 NOSIPQ9Y314 301 aaKnown RBP11.24□□□□□ -0.61
PDZRN3-205ENST00000466780 CFAP54Q96N23 3096 aa11.24□□□□□ -0.61
PDZRN3-205ENST00000466780 C3orf85A0A1B0GTC6 90 aa11.23□□□□□ -0.61
PDZRN3-205ENST00000466780 CCDC85CA6NKD9 419 aa11.23□□□□□ -0.61
PDZRN3-205ENST00000466780 PROB1E7EW31 1015 aa11.23□□□□□ -0.61
PDZRN3-205ENST00000466780 EPHA1P21709 976 aa11.23□□□□□ -0.61
PDZRN3-205ENST00000466780 DLK1P80370 383 aa11.23□□□□□ -0.61
PDZRN3-205ENST00000466780 ZNF266Q14584 549 aa11.23□□□□□ -0.61
PDZRN3-205ENST00000466780 ICAM4Q14773 271 aa11.23□□□□□ -0.61
PDZRN3-205ENST00000466780 SPNS3Q6ZMD2 512 aa11.23□□□□□ -0.61
PDZRN3-205ENST00000466780 TREM2Q9NZC2 230 aa11.23□□□□□ -0.61
PDZRN3-205ENST00000466780 FOXD3Q9UJU5 478 aaPredicted RBP11.23□□□□□ -0.61
PDZRN3-205ENST00000466780 HS3ST3B1Q9Y662 390 aa11.23□□□□□ -0.61
PDZRN3-205ENST00000466780 CHCHD2Q9Y6H1 151 aaPredicted RBP11.23□□□□□ -0.61
PDZRN3-205ENST00000466780 A0A087WWC5 75 aa11.23□□□□□ -0.61
PDZRN3-205ENST00000466780 TRDCB7Z8K6 153 aa11.23□□□□□ -0.61
PDZRN3-205ENST00000466780 ATXN7O15265 892 aaPredicted RBP11.23□□□□□ -0.61
PDZRN3-205ENST00000466780 MPPED1O15442 326 aa11.23□□□□□ -0.61
PDZRN3-205ENST00000466780 CDS2O95674 445 aa11.23□□□□□ -0.61
PDZRN3-205ENST00000466780 NKX2-1P43699 371 aaPredicted RBP11.23□□□□□ -0.61
PDZRN3-205ENST00000466780 RBP2P50120 134 aa11.23□□□□□ -0.61
PDZRN3-205ENST00000466780 UBE2KP61086 200 aa11.23□□□□□ -0.61
PDZRN3-205ENST00000466780 DAZAP2Q15038 168 aaPredicted RBP11.23□□□□□ -0.61
PDZRN3-205ENST00000466780 ZNF674Q2M3X9 581 aa11.23□□□□□ -0.61
PDZRN3-205ENST00000466780 WDR74Q6RFH5 385 aaPredicted RBP11.23□□□□□ -0.61
PDZRN3-205ENST00000466780 OSR2Q8N2R0 312 aa11.23□□□□□ -0.61
PDZRN3-205ENST00000466780 TMEM252Q8N6L7 170 aa11.23□□□□□ -0.61
PDZRN3-205ENST00000466780 CYB561D1Q8N8Q1 229 aa11.23□□□□□ -0.61
PDZRN3-205ENST00000466780 ZIC4Q8N9L1 334 aa11.23□□□□□ -0.61
PDZRN3-205ENST00000466780 CCDC71LQ8N9Z2 235 aa11.23□□□□□ -0.61
PDZRN3-205ENST00000466780 OR8G5Q8NG78 346 aa11.23□□□□□ -0.61
PDZRN3-205ENST00000466780 ZNF700Q9H0M5 742 aa11.23□□□□□ -0.61
PDZRN3-205ENST00000466780 MAGT1Q9H0U3 335 aa11.23□□□□□ -0.61
PDZRN3-205ENST00000466780 BCO1Q9HAY6 547 aa11.23□□□□□ -0.61
PDZRN3-205ENST00000466780 URGCP-MRPS24S4R325 110 aa11.23□□□□□ -0.61
PDZRN3-205ENST00000466780 TGIF2-C20orf24A0A0A6YYL0 155 aa11.22□□□□□ -0.61
PDZRN3-205ENST00000466780 SCAF4O95104 1147 aaKnown RBP11.22□□□□□ -0.61
PDZRN3-205ENST00000466780 PPYP01298 95 aa11.22□□□□□ -0.61
PDZRN3-205ENST00000466780 HAAOP46952 286 aa11.22□□□□□ -0.61
PDZRN3-205ENST00000466780 HERV-K104P61576 105 aa11.22□□□□□ -0.61
PDZRN3-205ENST00000466780 CNN3Q15417 329 aaKnown RBP11.22□□□□□ -0.61
PDZRN3-205ENST00000466780 CXorf66Q5JRM2 361 aaPredicted RBP11.22□□□□□ -0.61
PDZRN3-205ENST00000466780 C5orf24Q7Z6I8 188 aa11.22□□□□□ -0.61
PDZRN3-205ENST00000466780 ZNF429Q86V71 674 aa11.22□□□□□ -0.61
PDZRN3-205ENST00000466780 ZNF610Q8N9Z0 462 aa11.22□□□□□ -0.61
PDZRN3-205ENST00000466780 ZNF383Q8NA42 475 aa11.22□□□□□ -0.61
PDZRN3-205ENST00000466780 BORCS8Q96FH0 119 aa11.22□□□□□ -0.61
PDZRN3-205ENST00000466780 TMEM222Q9H0R3 208 aa11.22□□□□□ -0.61
PDZRN3-205ENST00000466780 GAR1Q9NY12 217 aaKnown RBP11.22□□□□□ -0.61
PDZRN3-205ENST00000466780 ST3GAL6Q9Y274 331 aa11.22□□□□□ -0.61
PDZRN3-205ENST00000466780 NPIPA2E9PIF3 369 aa11.22□□□□□ -0.61
PDZRN3-205ENST00000466780 NPIPA3F8WFD2 350 aa11.22□□□□□ -0.61
PDZRN3-205ENST00000466780 SSSCA1O60232 199 aa11.22□□□□□ -0.61
PDZRN3-205ENST00000466780 HIST1H2BKO60814 126 aa11.22□□□□□ -0.61
PDZRN3-205ENST00000466780 TMEM50AO95807 157 aa11.22□□□□□ -0.61
PDZRN3-205ENST00000466780 HIST1H2BJP06899 126 aa11.22□□□□□ -0.61
PDZRN3-205ENST00000466780 HIST1H2BOP23527 126 aa11.22□□□□□ -0.61
PDZRN3-205ENST00000466780 HIST1H2BBP33778 126 aa11.22□□□□□ -0.61
PDZRN3-205ENST00000466780 HIST1H2BDP58876 126 aa11.22□□□□□ -0.61
PDZRN3-205ENST00000466780 HIST1H2BCP62807 126 aa11.22□□□□□ -0.61
PDZRN3-205ENST00000466780 RUNX1Q01196 453 aa11.22□□□□□ -0.61
PDZRN3-205ENST00000466780 HIST2H2BEQ16778 126 aa11.22□□□□□ -0.61
PDZRN3-205ENST00000466780 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms