RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 Q6ZSR3 168 aa9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 RHBDD1Q8TEB9 315 aa9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 EMG1Q92979 244 aaKnown RBP9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 REEP6Q96HR9 211 aa9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 C2orf50Q96LR7 162 aa9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 LOC400499M0QZD8 3231 aa9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 ASPMQ8IZT6 3477 aa9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 IGKV1-12A0A0C4DH73 117 aa9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 PPP1R2P9O14990 202 aa9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 IGKV1D-12P01611 117 aa9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 LYL1P12980 280 aa9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 ZNF32P17041 273 aa9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 PAX6P26367 422 aa9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 ZNF84P51523 738 aa9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 MRPS34P82930 218 aaKnown RBP9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 RPL7L1Q6DKI1 246 aaKnown RBP9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 ETFRF1Q6IPR1 90 aa9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 GGNQ86UU5 652 aa9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 SLC5A7Q9GZV3 580 aa9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 TNRC6BQ9UPQ9 1833 aaKnown RBP9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 NTN3O00634 580 aaPredicted RBP9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 IFNA10P01566 189 aa9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 CSTBP04080 98 aaKnown RBP9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 CLDN15P56746 228 aa9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 PIGYQ3MUY2 71 aa9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 SP6Q3SY56 376 aa9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 M1APQ8TC57 530 aa9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 SPTSSAQ969W0 71 aa9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 AQP10Q96PS8 301 aa9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 SPACA1Q9HBV2 294 aa9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 PLA2G2EQ9NZK7 142 aa9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 RCC2Q9P258 522 aaKnown RBP9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 AK3Q9UIJ7 227 aa9.04□□□□□ -0.96
CLSTN1-203ENST00000435891 URB1O60287 2271 aaKnown RBP9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 C9J4A7 227 aa9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 CXCL13O43927 109 aa9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 CBR3O75828 277 aa9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 LCATP04180 440 aa9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 ZNF708P17019 499 aa9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 RAB4BP61018 213 aa9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 ZFP36L1Q07352 338 aaKnown RBP9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 TSPO2Q5TGU0 170 aa9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 BSCL2Q96G97 398 aaPredicted RBP9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 GPR61Q9BZJ8 451 aa9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 SIRT7Q9NRC8 400 aa9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 MMP26Q9NRE1 261 aa9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 ZDHHC8Q9ULC8 765 aa9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 PUS1Q9Y606 427 aaKnown RBP eCLIP9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 DOCK10Q96BY6 2186 aa9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 ZNF716A6NP11 495 aa9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 IGHV3-9P01782 118 aa9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 ID4P47928 161 aa9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 NKX6-1P78426 367 aaPredicted RBP9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 ZNF616Q08AN1 781 aa9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 FAM189A2Q15884 450 aa9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 IAH1Q2TAA2 248 aaPredicted RBP9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 Q6ZPA2 131 aa9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 SULF2Q8IWU5 870 aa9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 MRPL24Q96A35 216 aaKnown RBP9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 SCGB3A2Q96PL1 93 aa9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 PRO3102Q9H379 93 aa9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 DEPPQ9NTK1 212 aa9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 ANXA10Q9UJ72 324 aa9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 NCOR1O75376 2440 aa9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 GEMIN2O14893 280 aaKnown RBP9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 RGS19P49795 217 aa9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 PKIAP61925 76 aa9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 NAAAQ02083 359 aa9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 C4orf17Q53FE4 359 aa9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 WIPI1Q5MNZ9 446 aaPredicted RBP9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 SLC23A3Q6PIS1 610 aa9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 OR14L1PQ8NHC6 308 aa9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 TOMM40LQ969M1 308 aa9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 OPN3Q9H1Y3 402 aaPredicted RBP9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 TMEM38BQ9NVV0 291 aa9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 PPP1R14DQ9NXH3 145 aa9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 PCSK5Q92824 1860 aa9.03□□□□□ -0.96
CLSTN1-203ENST00000435891 DOCK7Q96N67 2140 aa9.02□□□□□ -0.96
CLSTN1-203ENST00000435891 ZNF587BE7ETH6 402 aa9.02□□□□□ -0.96
CLSTN1-203ENST00000435891 LRP3O75074 770 aa9.02□□□□□ -0.96
CLSTN1-203ENST00000435891 OR5H8P0DN80 308 aa9.02□□□□□ -0.96
CLSTN1-203ENST00000435891 HKR1P10072 659 aa9.02□□□□□ -0.96
CLSTN1-203ENST00000435891 OTX2P32243 289 aa9.02□□□□□ -0.96
CLSTN1-203ENST00000435891 RAC3P60763 192 aa9.02□□□□□ -0.96
CLSTN1-203ENST00000435891 PSG4Q00888 419 aa9.02□□□□□ -0.96
CLSTN1-203ENST00000435891 C5orf24Q7Z6I8 188 aa9.02□□□□□ -0.96
CLSTN1-203ENST00000435891 OR1F12Q8NHA8 337 aa9.02□□□□□ -0.96
CLSTN1-203ENST00000435891 ZNF845Q96IR2 970 aaPredicted RBP9.02□□□□□ -0.96
CLSTN1-203ENST00000435891 BCO1Q9HAY6 547 aa9.02□□□□□ -0.96
CLSTN1-203ENST00000435891 C14orf166Q9Y224 244 aaKnown RBP9.02□□□□□ -0.96
CLSTN1-203ENST00000435891 PINLYPA6NC86 204 aa9.02□□□□□ -0.97
CLSTN1-203ENST00000435891 LRRC3CA6NJW4 275 aa9.02□□□□□ -0.97
CLSTN1-203ENST00000435891 HEXAP06865 529 aa9.02□□□□□ -0.97
CLSTN1-203ENST00000435891 AGAP20933 346 aa9.02□□□□□ -0.97
CLSTN1-203ENST00000435891 CARD18P57730 90 aa9.02□□□□□ -0.97
CLSTN1-203ENST00000435891 RAB35Q15286 201 aa9.02□□□□□ -0.97
CLSTN1-203ENST00000435891 TIPARPQ7Z3E1 657 aaKnown RBP9.02□□□□□ -0.97
CLSTN1-203ENST00000435891 GPR137CQ8N3F9 429 aa9.02□□□□□ -0.97
CLSTN1-203ENST00000435891 KIRREL1Q96J84 757 aa9.02□□□□□ -0.97
CLSTN1-203ENST00000435891 SMIM3Q9BZL3 60 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms