RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 TTC19Q6DKK2 380 aaPredicted RBP3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 FAM71E1Q6IPT2 247 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 CLEC2AQ6UVW9 174 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 Q6ZT83 130 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 ZNF584Q8IVC4 421 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 NUDCD3Q8IVD9 361 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 FAM9CQ8IZT9 166 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 C6orf223Q8N319 242 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 WDR31Q8NA23 367 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 SDR9C7Q8NEX9 313 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 OR56B2PQ8NGI1 322 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 C7orf33Q8WU49 177 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 CDKL2Q92772 493 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 KCNA7Q96RP8 456 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 HIST1H4GQ99525 98 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 DHRS9Q9BPW9 319 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 FAIM2Q9BWQ8 316 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 C1QTNF6Q9BXI9 259 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 EBPLQ9BY08 206 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 YTHDF1Q9BYJ9 559 aaKnown RBP3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 POTEKPQ9BYX7 375 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 OR51J1Q9H342 316 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 ELOVL6Q9H5J4 265 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 SDHAF3Q9NRP4 125 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 CBLN4Q9NTU7 201 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 PRR34Q9NV39 138 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 TAS2R7Q9NYW3 318 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 SLC7A8Q9UHI5 535 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 MCTS1Q9ULC4 181 aaKnown RBP3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 TP53TG3Q9ULZ0 132 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 TIMM22Q9Y584 194 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 SLC25A15Q9Y619 301 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 VWFP04275 2813 aa3.95□□□□□ -1.78
RNU4-39P-201ENST00000362455 CR1P17927 2039 aa3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 PPIAL4EA0A075B759 164 aa3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 OR5B21A6NL26 309 aa3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 ZNF716A6NP11 495 aa3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 KCNK2O95069 426 aa3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 H6PDO95479 791 aa3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 OTCP00480 354 aa3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 ZNF735P0CB33 412 aa3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 PPIAL4FP0DN26 164 aa3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 TCP1P17987 556 aaKnown RBP3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 MPIP34949 423 aa3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 ZNF83P51522 516 aa3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 EFNA4P52798 201 aa3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 PLTPP55058 493 aa3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 SELENOTP62341 195 aa3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 PSPHP78330 225 aa3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 ZNF117Q03924 483 aa3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 C2orf80Q0P641 193 aa3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 SCRN3Q0VDG4 424 aa3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 MRPL28Q13084 256 aaKnown RBP3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 GGTLC2Q14390 218 aa3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 STK11Q15831 433 aa3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 TIMM23BQ5SRD1 257 aa3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 CCNJQ5T5M9 372 aa3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 RSBN1Q5VWQ0 802 aaPredicted RBP3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 ANKRD26P1Q6NSI1 321 aa3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 MUC15Q8N387 334 aa3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 CCDC71LQ8N9Z2 235 aa3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 GPR119Q8TDV5 335 aa3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 TECTBQ96PL2 329 aa3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 CNN2Q99439 309 aaKnown RBP3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 TBL1XR1Q9BZK7 514 aa3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 RNF167Q9H6Y7 350 aa3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 NIPAL2Q9H841 368 aa3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 PLSCR3Q9NRY6 295 aa3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 PAQR5Q9NXK6 330 aaPredicted RBP3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 PEX16Q9Y5Y5 336 aa3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 KCNE3Q9Y6H6 103 aa3.94□□□□□ -1.78
RNU4-39P-201ENST00000362455 NOTCH1P46531 2555 aa3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 A0A0J9YXY3 114 aa3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 GNG14A0A1W2PPG7 69 aa3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 A0A1W2PQD3 144 aa3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 CIB2O75838 187 aa3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 RBP1P09455 135 aa3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 PABPC4LP0CB38 370 aaKnown RBP3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 GGT1P19440 569 aa3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 KIR2DS4P43632 304 aa3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 SERPINB8P50452 374 aa3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 FABP6P51161 128 aa3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 APOC4P55056 127 aa3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 TGFBR3Q03167 851 aa3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 ZNF763Q0D2J5 394 aa3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 NAB1Q13506 487 aa3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 GABRA6Q16445 453 aa3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 ZNF678Q5SXM1 525 aa3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 Q6ZN92 141 aa3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 OLIG3Q7RTU3 272 aa3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 SPAG16Q8N0X2 631 aa3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 TPRX1Q8N7U7 411 aa3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 ATP6V1C2Q8NEY4 427 aa3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 OR51S1Q8NGJ8 323 aa3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 GPR151Q8TDV0 419 aa3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 CPNE4Q96A23 557 aaPredicted RBP3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 CIDECQ96AQ7 238 aaPredicted RBP3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 PLEKHA8Q96JA3 519 aa3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 ZNF382Q96SR6 550 aa3.93□□□□□ -1.78
RNU4-39P-201ENST00000362455 MRPL57Q9BQC6 102 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms