RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 SPRR3Q9UBC9 169 aa16.02■□□□□ 0.16
RNF139-201ENST00000303545 MED12LQ86YW9 2145 aa16.02■□□□□ 0.16
RNF139-201ENST00000303545 KLRC4-KLRK1H3BQV0 150 aa16.02■□□□□ 0.15
RNF139-201ENST00000303545 SRSF3P84103 164 aaKnown RBP16.02■□□□□ 0.15
RNF139-201ENST00000303545 NSUN5P2Q63ZY6 315 aa16.02■□□□□ 0.15
RNF139-201ENST00000303545 ZDHHC23Q8IYP9 409 aa16.02■□□□□ 0.15
RNF139-201ENST00000303545 TMEM231Q9H6L2 316 aa16.02■□□□□ 0.15
RNF139-201ENST00000303545 IL36GQ9NZH8 169 aa16.02■□□□□ 0.15
RNF139-201ENST00000303545 KLF13Q9Y2Y9 288 aaPredicted RBP16.02■□□□□ 0.15
RNF139-201ENST00000303545 RPL36A-HNRNPH2H7BZ11 118 aa16.01■□□□□ 0.15
RNF139-201ENST00000303545 WNT5AP41221 380 aa16.01■□□□□ 0.15
RNF139-201ENST00000303545 PLEKHN1Q494U1 663 aaPredicted RBP16.01■□□□□ 0.15
RNF139-201ENST00000303545 MEX3BQ6ZN04 569 aaKnown RBP16.01■□□□□ 0.15
RNF139-201ENST00000303545 APOBEC3DQ96AK3 386 aaPredicted RBP16.01■□□□□ 0.15
RNF139-201ENST00000303545 POM121L2Q96KW2 1035 aa16.01■□□□□ 0.15
RNF139-201ENST00000303545 SLC5A7Q9GZV3 580 aa16.01■□□□□ 0.15
RNF139-201ENST00000303545 NAA60Q9H7X0 242 aa16.01■□□□□ 0.15
RNF139-201ENST00000303545 HKR1P10072 659 aa16.01■□□□□ 0.15
RNF139-201ENST00000303545 HAGHLQ6PII5 290 aaPredicted RBP16.01■□□□□ 0.15
RNF139-201ENST00000303545 C17orf78Q8N4C9 275 aa16.01■□□□□ 0.15
RNF139-201ENST00000303545 LOXL4Q96JB6 756 aa16.01■□□□□ 0.15
RNF139-201ENST00000303545 FER1L6-AS2Q96M78 137 aa16.01■□□□□ 0.15
RNF139-201ENST00000303545 CNTNAP3BQ96NU0 1288 aa16.01■□□□□ 0.15
RNF139-201ENST00000303545 CNTNAP3Q9BZ76 1288 aa16.01■□□□□ 0.15
RNF139-201ENST00000303545 MEMO1Q9Y316 297 aa16.01■□□□□ 0.15
RNF139-201ENST00000303545 A0A1B0GW55 424 aa16■□□□□ 0.15
RNF139-201ENST00000303545 LRP3O75074 770 aa16■□□□□ 0.15
RNF139-201ENST00000303545 IFNA21P01568 189 aa16■□□□□ 0.15
RNF139-201ENST00000303545 DUX4L2P0CJ85 424 aa16■□□□□ 0.15
RNF139-201ENST00000303545 DUX4L3P0CJ86 424 aa16■□□□□ 0.15
RNF139-201ENST00000303545 DUX4L4P0CJ87 422 aa16■□□□□ 0.15
RNF139-201ENST00000303545 DUX4L5P0CJ88 424 aa16■□□□□ 0.15
RNF139-201ENST00000303545 DUX4L6P0CJ89 424 aa16■□□□□ 0.15
RNF139-201ENST00000303545 DUX4L7P0CJ90 424 aa16■□□□□ 0.15
RNF139-201ENST00000303545 TMEM187Q14656 261 aa16■□□□□ 0.15
RNF139-201ENST00000303545 TRIP6Q15654 476 aaKnown RBP16■□□□□ 0.15
RNF139-201ENST00000303545 EIF4E3Q8N5X7 224 aaKnown RBP16■□□□□ 0.15
RNF139-201ENST00000303545 STOML3Q8TAV4 291 aa16■□□□□ 0.15
RNF139-201ENST00000303545 BSCL2Q96G97 398 aaPredicted RBP16■□□□□ 0.15
RNF139-201ENST00000303545 AQP10Q96PS8 301 aa16■□□□□ 0.15
RNF139-201ENST00000303545 DUX4Q9UBX2 424 aa16■□□□□ 0.15
RNF139-201ENST00000303545 KCNIP3Q9Y2W7 256 aa16■□□□□ 0.15
RNF139-201ENST00000303545 PHF1O43189 567 aaPredicted RBP16■□□□□ 0.15
RNF139-201ENST00000303545 FBXO24O75426 580 aa16■□□□□ 0.15
RNF139-201ENST00000303545 IL18BPO95998 194 aa16■□□□□ 0.15
RNF139-201ENST00000303545 SCTP09683 121 aa16■□□□□ 0.15
RNF139-201ENST00000303545 LYL1P12980 280 aa16■□□□□ 0.15
RNF139-201ENST00000303545 CD46P15529 392 aa16■□□□□ 0.15
RNF139-201ENST00000303545 PLP2Q04941 152 aa16■□□□□ 0.15
RNF139-201ENST00000303545 NRN1LQ496H8 165 aa16■□□□□ 0.15
RNF139-201ENST00000303545 ZNF766Q5HY98 468 aa16■□□□□ 0.15
RNF139-201ENST00000303545 OR2T2Q6IF00 324 aa16■□□□□ 0.15
RNF139-201ENST00000303545 MYPOPQ86VE0 399 aaPredicted RBP16■□□□□ 0.15
RNF139-201ENST00000303545 GCNT2Q8N0V5 402 aa16■□□□□ 0.15
RNF139-201ENST00000303545 SLC30A7Q8NEW0 376 aa16■□□□□ 0.15
RNF139-201ENST00000303545 DECR2Q9NUI1 292 aa16■□□□□ 0.15
RNF139-201ENST00000303545 CD300LBA8K4G0 201 aa15.99■□□□□ 0.15
RNF139-201ENST00000303545 ZNF724A8MTY0 619 aa15.99■□□□□ 0.15
RNF139-201ENST00000303545 ZNF705EA8MWA4 302 aaPredicted RBP15.99■□□□□ 0.15
RNF139-201ENST00000303545 HS3ST1O14792 307 aa15.99■□□□□ 0.15
RNF139-201ENST00000303545 PRKACAP17612 351 aa15.99■□□□□ 0.15
RNF139-201ENST00000303545 ATF4P18848 351 aaPredicted RBP15.99■□□□□ 0.15
RNF139-201ENST00000303545 ECI1P42126 302 aa15.99■□□□□ 0.15
RNF139-201ENST00000303545 HERV-K104P61576 105 aa15.99■□□□□ 0.15
RNF139-201ENST00000303545 CEACAM21Q3KPI0 293 aa15.99■□□□□ 0.15
RNF139-201ENST00000303545 LHFPL5Q8TAF8 219 aa15.99■□□□□ 0.15
RNF139-201ENST00000303545 MARC2Q969Z3 335 aa15.99■□□□□ 0.15
RNF139-201ENST00000303545 LRRC46Q96FV0 321 aa15.99■□□□□ 0.15
RNF139-201ENST00000303545 PARP12Q9H0J9 701 aaKnown RBP15.99■□□□□ 0.15
RNF139-201ENST00000303545 CNOT1A5YKK6 2376 aaKnown RBP15.99■□□□□ 0.15
RNF139-201ENST00000303545 PRR14LQ5THK1 2151 aa15.99■□□□□ 0.15
RNF139-201ENST00000303545 NKX2-8O15522 239 aa15.99■□□□□ 0.15
RNF139-201ENST00000303545 CELA3BP08861 270 aa15.99■□□□□ 0.15
RNF139-201ENST00000303545 PET100P0DJ07 73 aa15.99■□□□□ 0.15
RNF139-201ENST00000303545 RPL12P30050 165 aaKnown RBP15.99■□□□□ 0.15
RNF139-201ENST00000303545 GLP1RP43220 463 aa15.99■□□□□ 0.15
RNF139-201ENST00000303545 MDP1Q86V88 176 aa15.99■□□□□ 0.15
RNF139-201ENST00000303545 OR52M1Q8NGK5 317 aa15.99■□□□□ 0.15
RNF139-201ENST00000303545 NBEAQ8NFP9 2946 aa15.99■□□□□ 0.15
RNF139-201ENST00000303545 ACTL6AO96019 429 aa15.98■□□□□ 0.15
RNF139-201ENST00000303545 CA6P23280 308 aa15.98■□□□□ 0.15
RNF139-201ENST00000303545 RNPS1Q15287 305 aaKnown RBP15.98■□□□□ 0.15
RNF139-201ENST00000303545 SPIN3Q5JUX0 258 aa15.98■□□□□ 0.15
RNF139-201ENST00000303545 SECTM1Q8WVN6 248 aa15.98■□□□□ 0.15
RNF139-201ENST00000303545 WDYHV1Q96HA8 205 aa15.98■□□□□ 0.15
RNF139-201ENST00000303545 TP53RKQ96S44 253 aa15.98■□□□□ 0.15
RNF139-201ENST00000303545 HRH4Q9H3N8 390 aa15.98■□□□□ 0.15
RNF139-201ENST00000303545 TRGV5A0A0B4J1U4 118 aa15.98■□□□□ 0.15
RNF139-201ENST00000303545 TRAPPC2LH3BP13 241 aa15.98■□□□□ 0.15
RNF139-201ENST00000303545 K7EPK0 472 aa15.98■□□□□ 0.15
RNF139-201ENST00000303545 MBPP02686 304 aaPredicted RBP15.98■□□□□ 0.15
RNF139-201ENST00000303545 ZNF806P0C7X5 589 aa15.98■□□□□ 0.15
RNF139-201ENST00000303545 APLNRP35414 380 aa15.98■□□□□ 0.15
RNF139-201ENST00000303545 CCL11P51671 97 aa15.98■□□□□ 0.15
RNF139-201ENST00000303545 FAM71E2Q8N5Q1 922 aa15.98■□□□□ 0.15
RNF139-201ENST00000303545 GLYATL2Q8WU03 294 aa15.98■□□□□ 0.15
RNF139-201ENST00000303545 RDH5Q92781 318 aa15.98■□□□□ 0.15
RNF139-201ENST00000303545 TECTBQ96PL2 329 aa15.98■□□□□ 0.15
RNF139-201ENST00000303545 SPAARA0A1B0GVQ0 90 aa15.98■□□□□ 0.15
RNF139-201ENST00000303545 SLC22A20A6NK97 555 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms