RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 PPP1CAP62136 330 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 H3F3AP84243 136 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 TLE4Q04727 773 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 DMWDQ09019 674 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 ZNF266Q14584 549 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 PCK2Q16822 640 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 ZNF880Q6PDB4 577 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 SLC23A3Q6PIS1 610 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 AMELYQ99218 206 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 STACQ99469 402 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 SEC11CQ9BY50 192 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 SLC35B3Q9H1N7 401 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 AURKAIP1Q9NWT8 199 aaPredicted RBP4.83□□□□□ -1.64
LIMA1-203ENST00000547825 DOCK10Q96BY6 2186 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 LOC102724200A0A096LPH7 203 aaPredicted RBP4.82□□□□□ -1.64
LIMA1-203ENST00000547825 CLDN1O95832 211 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 CST4P01036 141 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 ZNF25P17030 456 aaPredicted RBP4.82□□□□□ -1.64
LIMA1-203ENST00000547825 HNRNPA2B1P22626 353 aaKnown RBP4.82□□□□□ -1.64
LIMA1-203ENST00000547825 CD1CP29017 333 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 SLC6A8P48029 635 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 EFNA3P52797 238 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 CASP6P55212 293 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 PPP2CBP62714 309 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 PPP2CAP67775 309 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 MFAP5Q13361 173 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 MPPED2Q15777 294 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 KIF26BQ2KJY2 2108 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 SPANXN5Q5MJ07 72 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 ACER2Q5QJU3 275 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 PLCXD3Q63HM9 321 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 C6orf201Q7Z4U5 140 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 VN1R4Q7Z5H5 301 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 C1orf210Q8IVY1 113 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 SFTPA2Q8IWL1 248 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 NKAIN3Q8N8D7 197 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 OR52N5Q8NH56 324 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 SMIM7Q9BQ49 75 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 VN1R1Q9GZP7 353 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 KIR3DX1Q9H7L2 352 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 BCO1Q9HAY6 547 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 MMP25Q9NPA2 562 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 TMEM74BQ9NUR3 256 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 DKKL1Q9UK85 242 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 PIGLQ9Y2B2 252 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 CTDSPLO15194 276 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 SPRY1O43609 319 aaPredicted RBP4.82□□□□□ -1.64
LIMA1-203ENST00000547825 SPINK4O60575 86 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 IGHG1P01857 330 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 NTF3P20783 257 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 CSNK1A1P48729 337 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 EEF1A1P68104 462 aaKnown RBP4.82□□□□□ -1.64
LIMA1-203ENST00000547825 RPL19P84098 196 aaKnown RBP4.82□□□□□ -1.64
LIMA1-203ENST00000547825 TGFBR3Q03167 851 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 Q3ZCU0 254 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 NKAIN1Q4KMZ8 207 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 PABPC1L2AQ5JQF8 200 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 NPSR1Q6W5P4 371 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 DBX2Q6ZNG2 339 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 SPEM1Q8N4L4 309 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 LHX4Q969G2 390 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 DDIT4LQ96D03 193 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 PHYHIPLQ96FC7 376 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 LCORQ96JN0 433 aaPredicted RBP4.82□□□□□ -1.64
LIMA1-203ENST00000547825 WFIKKN1Q96NZ8 548 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 PRSS27Q9BQR3 290 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 PBOV1Q9GZY1 135 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 ESRP2Q9H6T0 727 aaKnown RBP4.82□□□□□ -1.64
LIMA1-203ENST00000547825 ZNF286AQ9HBT8 521 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 MRPS18BQ9Y676 258 aaKnown RBP4.82□□□□□ -1.64
LIMA1-203ENST00000547825 V9GYS6 101 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 CPAMD8Q8IZJ3 1885 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 A0A0G2JK05 382 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 A0A0G2JNJ9 132 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 A0A1W2PPV4 95 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 A8MVM7 634 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 TAAR5O14804 337 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 DFFBO76075 338 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 ACAA1P09110 424 aaPredicted RBP4.82□□□□□ -1.64
LIMA1-203ENST00000547825 LPAR6P43657 344 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 ERVS71-1P61550 626 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 HTD2P86397 168 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 FAM53BQ14153 422 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 ARL6IP1Q15041 203 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 CSRP2Q16527 193 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 AADACL3Q5VUY0 350 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 DHRS11Q6UWP2 260 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 C15orf54Q8N8G6 183 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 ZNRF4Q8WWF5 429 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 EMG1Q92979 244 aaKnown RBP4.82□□□□□ -1.64
LIMA1-203ENST00000547825 IL22RA2Q969J5 263 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 FAM210BQ96KR6 192 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 AP1S3Q96PC3 154 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 ATG101Q9BSB4 218 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 FAM234AQ9H0X4 552 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 WDR13Q9H1Z4 485 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 Q9UFV3 132 aa4.82□□□□□ -1.64
LIMA1-203ENST00000547825 CCDC187A0A096LP49 1063 aa4.81□□□□□ -1.64
LIMA1-203ENST00000547825 MSGN1A6NI15 193 aa4.81□□□□□ -1.64
LIMA1-203ENST00000547825 E5RGE8 158 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms