RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 TNFAIP8O95379 198 aa3.21□□□□□ -1.9
HMGB1P47-201ENST00000511281 NTF3P20783 257 aa3.21□□□□□ -1.9
HMGB1P47-201ENST00000511281 MPIP34949 423 aa3.21□□□□□ -1.9
HMGB1P47-201ENST00000511281 ZNF616Q08AN1 781 aa3.21□□□□□ -1.9
HMGB1P47-201ENST00000511281 PIGHQ14442 188 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P47-201ENST00000511281 SP6Q3SY56 376 aa3.21□□□□□ -1.9
HMGB1P47-201ENST00000511281 OR10J3Q5JRS4 329 aa3.21□□□□□ -1.9
HMGB1P47-201ENST00000511281 TIMM23BQ5SRD1 257 aa3.21□□□□□ -1.9
HMGB1P47-201ENST00000511281 ZNF880Q6PDB4 577 aa3.21□□□□□ -1.9
HMGB1P47-201ENST00000511281 CRLF3Q8IUI8 442 aa3.21□□□□□ -1.9
HMGB1P47-201ENST00000511281 ST20-AS1Q8NBB2 130 aa3.21□□□□□ -1.9
HMGB1P47-201ENST00000511281 RTN4IP1Q8WWV3 396 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P47-201ENST00000511281 IP6K3Q96PC2 410 aa3.21□□□□□ -1.9
HMGB1P47-201ENST00000511281 LLPHQ9BRT6 129 aaKnown RBP3.21□□□□□ -1.9
HMGB1P47-201ENST00000511281 DSN1Q9H410 356 aa3.21□□□□□ -1.9
HMGB1P47-201ENST00000511281 C15orf41Q9Y2V0 281 aa3.21□□□□□ -1.9
HMGB1P47-201ENST00000511281 COL27A1Q8IZC6 1860 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P47-201ENST00000511281 BICRAQ9NZM4 1560 aa3.21□□□□□ -1.9
HMGB1P47-201ENST00000511281 ELP1O95163 1332 aa3.2□□□□□ -1.9
HMGB1P47-201ENST00000511281 RAD50Q92878 1312 aa3.2□□□□□ -1.9
HMGB1P47-201ENST00000511281 SLIT3O75094 1523 aa3.2□□□□□ -1.9
HMGB1P47-201ENST00000511281 MYBPHLA2RUH7 354 aa3.2□□□□□ -1.9
HMGB1P47-201ENST00000511281 LRCOL1A6NCL2 159 aa3.2□□□□□ -1.9
HMGB1P47-201ENST00000511281 CD300LBA8K4G0 201 aa3.2□□□□□ -1.9
HMGB1P47-201ENST00000511281 C9JQL5 133 aa3.2□□□□□ -1.9
HMGB1P47-201ENST00000511281 SULT1C2O00338 296 aa3.2□□□□□ -1.9
HMGB1P47-201ENST00000511281 TOR1AO14656 332 aa3.2□□□□□ -1.9
HMGB1P47-201ENST00000511281 TOX3O15405 576 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P47-201ENST00000511281 MAGEB4O15481 346 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P47-201ENST00000511281 GYG2O15488 501 aa3.2□□□□□ -1.9
HMGB1P47-201ENST00000511281 SYNGR1O43759 233 aa3.2□□□□□ -1.9
HMGB1P47-201ENST00000511281 DHRS3O75911 302 aa3.2□□□□□ -1.9
HMGB1P47-201ENST00000511281 OR2A4O95047 310 aa3.2□□□□□ -1.9
HMGB1P47-201ENST00000511281 RGS19P49795 217 aa3.2□□□□□ -1.9
HMGB1P47-201ENST00000511281 PLTPP55058 493 aa3.2□□□□□ -1.9
HMGB1P47-201ENST00000511281 MEF2CQ06413 473 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P47-201ENST00000511281 BTN1A1Q13410 526 aa3.2□□□□□ -1.9
HMGB1P47-201ENST00000511281 RAB31Q13636 194 aa3.2□□□□□ -1.9
HMGB1P47-201ENST00000511281 GLYATQ6IB77 296 aa3.2□□□□□ -1.9
HMGB1P47-201ENST00000511281 FAM183BPQ6ZVS7 135 aa3.2□□□□□ -1.9
HMGB1P47-201ENST00000511281 OR5AK3PQ8NH89 298 aa3.2□□□□□ -1.9
HMGB1P47-201ENST00000511281 ZNF420Q8TAQ5 688 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P47-201ENST00000511281 ACTL9Q8TC94 416 aa3.2□□□□□ -1.9
HMGB1P47-201ENST00000511281 STARD4Q96DR4 205 aa3.2□□□□□ -1.9
HMGB1P47-201ENST00000511281 OR2A7Q96R45 310 aa3.2□□□□□ -1.9
HMGB1P47-201ENST00000511281 MS4A8Q9BY19 250 aa3.2□□□□□ -1.9
HMGB1P47-201ENST00000511281 NDEL1Q9GZM8 345 aa3.2□□□□□ -1.9
HMGB1P47-201ENST00000511281 RHOFQ9HBH0 211 aa3.2□□□□□ -1.9
HMGB1P47-201ENST00000511281 C1orf109Q9NX04 203 aa3.2□□□□□ -1.9
HMGB1P47-201ENST00000511281 NOS1P29475 1434 aa3.19□□□□□ -1.9
HMGB1P47-201ENST00000511281 UNC13AQ9UPW8 1703 aa3.19□□□□□ -1.9
HMGB1P47-201ENST00000511281 TUBGCP6Q96RT7 1819 aa3.19□□□□□ -1.9
HMGB1P47-201ENST00000511281 C7orf66A4D0T2 115 aa3.19□□□□□ -1.9
HMGB1P47-201ENST00000511281 PGPA6NDG6 321 aa3.19□□□□□ -1.9
HMGB1P47-201ENST00000511281 GOLGA8RI6L899 631 aa3.19□□□□□ -1.9
HMGB1P47-201ENST00000511281 LGALS9O00182 355 aa3.19□□□□□ -1.9
HMGB1P47-201ENST00000511281 UGT2B11O75310 529 aa3.19□□□□□ -1.9
HMGB1P47-201ENST00000511281 LIMS3P0CW19 117 aa3.19□□□□□ -1.9
HMGB1P47-201ENST00000511281 LIMS4P0CW20 117 aa3.19□□□□□ -1.9
HMGB1P47-201ENST00000511281 NPY1RP25929 384 aa3.19□□□□□ -1.9
HMGB1P47-201ENST00000511281 ELK4P28324 431 aa3.19□□□□□ -1.9
HMGB1P47-201ENST00000511281 PITPNAQ00169 270 aa3.19□□□□□ -1.9
HMGB1P47-201ENST00000511281 ATP5G2Q06055 141 aa3.19□□□□□ -1.9
HMGB1P47-201ENST00000511281 ZNF678Q5SXM1 525 aa3.19□□□□□ -1.9
HMGB1P47-201ENST00000511281 PRSS54Q6PEW0 395 aa3.19□□□□□ -1.9
HMGB1P47-201ENST00000511281 CLEC18BQ6UXF7 455 aa3.19□□□□□ -1.9
HMGB1P47-201ENST00000511281 TRMT10CQ7L0Y3 403 aaKnown RBP3.19□□□□□ -1.9
HMGB1P47-201ENST00000511281 H1FOOQ8IZA3 346 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P47-201ENST00000511281 OR8A1Q8NGG7 326 aa3.19□□□□□ -1.9
HMGB1P47-201ENST00000511281 OR5H2Q8NGV7 314 aa3.19□□□□□ -1.9
HMGB1P47-201ENST00000511281 RNASEH2CQ8TDP1 164 aaKnown RBP3.19□□□□□ -1.9
HMGB1P47-201ENST00000511281 C22orf15Q8WYQ4 148 aa3.19□□□□□ -1.9
HMGB1P47-201ENST00000511281 CCDC127Q96BQ5 260 aa3.19□□□□□ -1.9
HMGB1P47-201ENST00000511281 APOL4Q9BPW4 351 aa3.19□□□□□ -1.9
HMGB1P47-201ENST00000511281 WDR54Q9H977 334 aa3.19□□□□□ -1.9
HMGB1P47-201ENST00000511281 FBXO6Q9NRD1 293 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P47-201ENST00000511281 IL37Q9NZH6 218 aa3.19□□□□□ -1.9
HMGB1P47-201ENST00000511281 NUP153P49790 1475 aaKnown RBP3.19□□□□□ -1.9
HMGB1P47-201ENST00000511281 IGLV3-12A0A075B6K2 115 aa3.18□□□□□ -1.9
HMGB1P47-201ENST00000511281 A0A1W2PRG6 482 aa3.18□□□□□ -1.9
HMGB1P47-201ENST00000511281 BTNL10A8MVZ5 291 aa3.18□□□□□ -1.9
HMGB1P47-201ENST00000511281 ITGB1BP1O14713 200 aa3.18□□□□□ -1.9
HMGB1P47-201ENST00000511281 PDCD6O75340 191 aa3.18□□□□□ -1.9
HMGB1P47-201ENST00000511281 CNMDO75829 334 aa3.18□□□□□ -1.9
HMGB1P47-201ENST00000511281 CA2P00918 260 aa3.18□□□□□ -1.9
HMGB1P47-201ENST00000511281 SLC2A1P11166 492 aa3.18□□□□□ -1.9
HMGB1P47-201ENST00000511281 PSMB9P28065 219 aa3.18□□□□□ -1.9
HMGB1P47-201ENST00000511281 STC1P52823 247 aa3.18□□□□□ -1.9
HMGB1P47-201ENST00000511281 BNIP2Q12982 314 aa3.18□□□□□ -1.9
HMGB1P47-201ENST00000511281 SSX1Q16384 188 aa3.18□□□□□ -1.9
HMGB1P47-201ENST00000511281 KLHL12Q53G59 568 aa3.18□□□□□ -1.9
HMGB1P47-201ENST00000511281 FAM162BQ5T6X4 162 aa3.18□□□□□ -1.9
HMGB1P47-201ENST00000511281 PDPNQ86YL7 162 aa3.18□□□□□ -1.9
HMGB1P47-201ENST00000511281 OSR2Q8N2R0 312 aa3.18□□□□□ -1.9
HMGB1P47-201ENST00000511281 TMEM105Q8N8V8 129 aa3.18□□□□□ -1.9
HMGB1P47-201ENST00000511281 APCDD1LQ8NCL9 501 aa3.18□□□□□ -1.9
HMGB1P47-201ENST00000511281 DYNC2LI1Q8TCX1 351 aa3.18□□□□□ -1.9
HMGB1P47-201ENST00000511281 WDR34Q96EX3 536 aa3.18□□□□□ -1.9
HMGB1P47-201ENST00000511281 MRAP2Q96G30 205 aa3.18□□□□□ -1.9
HMGB1P47-201ENST00000511281 FMC1Q96HJ9 113 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms