RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 FAM89BQ8N5H3 189 aa12.09□□□□□ -0.47
HDAC1-206ENST00000476391 DAZLQ92904 295 aaKnown RBP12.09□□□□□ -0.47
HDAC1-206ENST00000476391 OR10A2Q9H208 303 aa12.09□□□□□ -0.47
HDAC1-206ENST00000476391 BANF2Q9H503 90 aa12.09□□□□□ -0.47
HDAC1-206ENST00000476391 GLRX2Q9NS18 164 aa12.09□□□□□ -0.47
HDAC1-206ENST00000476391 PRSS50Q9UI38 385 aa12.09□□□□□ -0.47
HDAC1-206ENST00000476391 CEP350Q5VT06 3117 aa12.09□□□□□ -0.47
HDAC1-206ENST00000476391 IGSF23A1L1A6 192 aa12.08□□□□□ -0.48
HDAC1-206ENST00000476391 ZFP92A6NM28 416 aa12.08□□□□□ -0.48
HDAC1-206ENST00000476391 ZNF878C9JN71 531 aa12.08□□□□□ -0.48
HDAC1-206ENST00000476391 SYNGR4O95473 234 aa12.08□□□□□ -0.48
HDAC1-206ENST00000476391 EFEMP2O95967 443 aa12.08□□□□□ -0.48
HDAC1-206ENST00000476391 FREM3P0C091 2139 aa12.08□□□□□ -0.48
HDAC1-206ENST00000476391 EPHA8P29322 1005 aaPredicted RBP12.08□□□□□ -0.48
HDAC1-206ENST00000476391 ADIRFQ15847 76 aa12.08□□□□□ -0.48
HDAC1-206ENST00000476391 MPV17LQ2QL34 196 aa12.08□□□□□ -0.48
HDAC1-206ENST00000476391 MAJINQ3KP22 176 aa12.08□□□□□ -0.48
HDAC1-206ENST00000476391 AGBL4Q5VU57 503 aa12.08□□□□□ -0.48
HDAC1-206ENST00000476391 NECAP1Q8NC96 275 aa12.08□□□□□ -0.48
HDAC1-206ENST00000476391 OR1L6Q8NGR2 347 aa12.08□□□□□ -0.48
HDAC1-206ENST00000476391 CORO2AQ92828 525 aa12.08□□□□□ -0.48
HDAC1-206ENST00000476391 CAPNS2Q96L46 248 aa12.08□□□□□ -0.48
HDAC1-206ENST00000476391 GABRG3Q99928 467 aa12.08□□□□□ -0.48
HDAC1-206ENST00000476391 WWTR1Q9GZV5 400 aa12.08□□□□□ -0.48
HDAC1-206ENST00000476391 SEPSECSQ9HD40 501 aaKnown RBP12.08□□□□□ -0.48
HDAC1-206ENST00000476391 LANCL2Q9NS86 450 aa12.08□□□□□ -0.48
HDAC1-206ENST00000476391 IFNL4K9M1U5 179 aa12.08□□□□□ -0.48
HDAC1-206ENST00000476391 PRNPP04156 253 aa12.08□□□□□ -0.48
HDAC1-206ENST00000476391 HPNP05981 417 aa12.08□□□□□ -0.48
HDAC1-206ENST00000476391 CTLA4P16410 223 aa12.08□□□□□ -0.48
HDAC1-206ENST00000476391 RPL27P61353 136 aaKnown RBP12.08□□□□□ -0.48
HDAC1-206ENST00000476391 BSXQ3C1V8 233 aa12.08□□□□□ -0.48
HDAC1-206ENST00000476391 SP6Q3SY56 376 aa12.08□□□□□ -0.48
HDAC1-206ENST00000476391 OR5C1Q8NGR4 320 aa12.08□□□□□ -0.48
HDAC1-206ENST00000476391 OR2T10Q8NGZ9 312 aa12.08□□□□□ -0.48
HDAC1-206ENST00000476391 ZNF519Q8TB69 540 aa12.08□□□□□ -0.48
HDAC1-206ENST00000476391 ANAPC16Q96DE5 110 aa12.08□□□□□ -0.48
HDAC1-206ENST00000476391 REEP6Q96HR9 211 aa12.08□□□□□ -0.48
HDAC1-206ENST00000476391 LYRM2Q9NU23 88 aaPredicted RBP12.08□□□□□ -0.48
HDAC1-206ENST00000476391 TMEM74BQ9NUR3 256 aa12.08□□□□□ -0.48
HDAC1-206ENST00000476391 RNF150Q9ULK6 438 aa12.08□□□□□ -0.48
HDAC1-206ENST00000476391 PAM16Q9Y3D7 125 aa12.08□□□□□ -0.48
HDAC1-206ENST00000476391 CLEC18AA5D8T8 446 aa12.07□□□□□ -0.48
HDAC1-206ENST00000476391 SOX1O00570 391 aaPredicted RBP12.07□□□□□ -0.48
HDAC1-206ENST00000476391 TCN2P20062 427 aa12.07□□□□□ -0.48
HDAC1-206ENST00000476391 SRP14P37108 136 aaKnown RBP12.07□□□□□ -0.48
HDAC1-206ENST00000476391 METAP1P53582 386 aa12.07□□□□□ -0.48
HDAC1-206ENST00000476391 TAS2R30P59541 319 aa12.07□□□□□ -0.48
HDAC1-206ENST00000476391 PAFAH1B2P68402 229 aa12.07□□□□□ -0.48
HDAC1-206ENST00000476391 LCN2P80188 198 aa12.07□□□□□ -0.48
HDAC1-206ENST00000476391 C9orf50Q5SZB4 431 aa12.07□□□□□ -0.48
HDAC1-206ENST00000476391 LINC01551Q86U37 167 aa12.07□□□□□ -0.48
HDAC1-206ENST00000476391 TMEM252Q8N6L7 170 aa12.07□□□□□ -0.48
HDAC1-206ENST00000476391 CLEC18CQ8NCF0 446 aa12.07□□□□□ -0.48
HDAC1-206ENST00000476391 RTN4IP1Q8WWV3 396 aaPredicted RBP12.07□□□□□ -0.48
HDAC1-206ENST00000476391 TM4SF19Q96DZ7 209 aa12.07□□□□□ -0.48
HDAC1-206ENST00000476391 LRIT1Q9P2V4 623 aa12.07□□□□□ -0.48
HDAC1-206ENST00000476391 LOC105371242A0A075B767 164 aa12.07□□□□□ -0.48
HDAC1-206ENST00000476391 LOC101059948A0A1B0GTJ6 334 aa12.07□□□□□ -0.48
HDAC1-206ENST00000476391 GPR89AB7ZAQ6 455 aa12.07□□□□□ -0.48
HDAC1-206ENST00000476391 SEMA4FO95754 770 aa12.07□□□□□ -0.48
HDAC1-206ENST00000476391 DDAH2O95865 285 aa12.07□□□□□ -0.48
HDAC1-206ENST00000476391 TTRP02766 147 aa12.07□□□□□ -0.48
HDAC1-206ENST00000476391 OR5G3P0C626 314 aa12.07□□□□□ -0.48
HDAC1-206ENST00000476391 GPR89BP0CG08 455 aa12.07□□□□□ -0.48
HDAC1-206ENST00000476391 DCAF7P61962 342 aa12.07□□□□□ -0.48
HDAC1-206ENST00000476391 BAXQ07812 192 aa12.07□□□□□ -0.48
HDAC1-206ENST00000476391 RNF151Q2KHN1 245 aa12.07□□□□□ -0.48
HDAC1-206ENST00000476391 TDRG1Q3Y452 100 aa12.07□□□□□ -0.48
HDAC1-206ENST00000476391 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.07□□□□□ -0.48
HDAC1-206ENST00000476391 OR4C3Q8NH37 302 aa12.07□□□□□ -0.48
HDAC1-206ENST00000476391 MSI2Q96DH6 328 aaKnown RBP12.07□□□□□ -0.48
HDAC1-206ENST00000476391 BTF3L4Q96K17 158 aa12.07□□□□□ -0.48
HDAC1-206ENST00000476391 TMEM9BQ9NQ34 198 aa12.07□□□□□ -0.48
HDAC1-206ENST00000476391 DOCK8Q8NF50 2099 aa12.06□□□□□ -0.48
HDAC1-206ENST00000476391 FOXI3A8MTJ6 420 aaPredicted RBP12.06□□□□□ -0.48
HDAC1-206ENST00000476391 CDS2O95674 445 aa12.06□□□□□ -0.48
HDAC1-206ENST00000476391 OR3A4PP47883 348 aa12.06□□□□□ -0.48
HDAC1-206ENST00000476391 ABCA11PQ4W5N1 156 aa12.06□□□□□ -0.48
HDAC1-206ENST00000476391 ZNF787Q6DD87 383 aa12.06□□□□□ -0.48
HDAC1-206ENST00000476391 TMEM52Q8NDY8 209 aa12.06□□□□□ -0.48
HDAC1-206ENST00000476391 ADOQ96SZ5 270 aa12.06□□□□□ -0.48
HDAC1-206ENST00000476391 SMIM7Q9BQ49 75 aa12.06□□□□□ -0.48
HDAC1-206ENST00000476391 OR51I2Q9H344 312 aa12.06□□□□□ -0.48
HDAC1-206ENST00000476391 RYDENQ9NUL5 291 aaKnown RBP12.06□□□□□ -0.48
HDAC1-206ENST00000476391 FAM206AQ9NX38 181 aa12.06□□□□□ -0.48
HDAC1-206ENST00000476391 METTL12A8MUP2 240 aa12.06□□□□□ -0.48
HDAC1-206ENST00000476391 ZNF823P16415 610 aa12.06□□□□□ -0.48
HDAC1-206ENST00000476391 ACKR1Q16570 336 aa12.06□□□□□ -0.48
HDAC1-206ENST00000476391 ACSF3Q4G176 576 aaPredicted RBP12.06□□□□□ -0.48
HDAC1-206ENST00000476391 TMEM52BQ4KMG9 183 aa12.06□□□□□ -0.48
HDAC1-206ENST00000476391 MRGPRGQ86SM5 289 aa12.06□□□□□ -0.48
HDAC1-206ENST00000476391 TCEAL8Q8IYN2 117 aa12.06□□□□□ -0.48
HDAC1-206ENST00000476391 STPG4Q8N801 248 aa12.06□□□□□ -0.48
HDAC1-206ENST00000476391 MBD3L1Q8WWY6 194 aa12.06□□□□□ -0.48
HDAC1-206ENST00000476391 IRF7Q92985 503 aa12.06□□□□□ -0.48
HDAC1-206ENST00000476391 IL22RA2Q969J5 263 aa12.06□□□□□ -0.48
HDAC1-206ENST00000476391 ABHD14BQ96IU4 210 aa12.06□□□□□ -0.48
HDAC1-206ENST00000476391 VSTM2LQ96N03 204 aa12.06□□□□□ -0.48
HDAC1-206ENST00000476391 MAGT1Q9H0U3 335 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 888.7 ms