RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 TLX3O43711 291 aaPredicted RBP11.28□□□□□ -0.6
PDZRN3-205ENST00000466780 RD3LP0DJH9 198 aa11.28□□□□□ -0.6
PDZRN3-205ENST00000466780 RPS10P46783 165 aaKnown RBP11.28□□□□□ -0.6
PDZRN3-205ENST00000466780 KIAA0141Q14154 515 aaPredicted RBP11.28□□□□□ -0.6
PDZRN3-205ENST00000466780 RSU1Q15404 277 aa11.28□□□□□ -0.6
PDZRN3-205ENST00000466780 C10orf128Q5T292 105 aa11.28□□□□□ -0.6
PDZRN3-205ENST00000466780 RHBDD2Q6NTF9 364 aa11.28□□□□□ -0.6
PDZRN3-205ENST00000466780 SLC22A25Q6T423 547 aa11.28□□□□□ -0.6
PDZRN3-205ENST00000466780 ZNF574Q6ZN55 896 aaPredicted RBP11.28□□□□□ -0.6
PDZRN3-205ENST00000466780 Q6ZPA2 131 aa11.28□□□□□ -0.6
PDZRN3-205ENST00000466780 LGI3Q8N145 548 aa11.28□□□□□ -0.6
PDZRN3-205ENST00000466780 OR2AE1Q8NHA4 323 aa11.28□□□□□ -0.6
PDZRN3-205ENST00000466780 PAPOLGQ9BWT3 736 aaKnown RBP11.28□□□□□ -0.6
PDZRN3-205ENST00000466780 ANGPTL4Q9BY76 406 aa11.28□□□□□ -0.6
PDZRN3-205ENST00000466780 MYOTQ9UBF9 498 aa11.28□□□□□ -0.6
PDZRN3-205ENST00000466780 ASCC3Q8N3C0 2202 aaKnown RBP11.28□□□□□ -0.6
PDZRN3-205ENST00000466780 FAM230AA0A1W2PPH8 454 aa11.28□□□□□ -0.6
PDZRN3-205ENST00000466780 FAM24AA6NFZ4 105 aa11.28□□□□□ -0.6
PDZRN3-205ENST00000466780 TIAF1O95411 115 aa11.28□□□□□ -0.6
PDZRN3-205ENST00000466780 CD63P08962 238 aa11.28□□□□□ -0.6
PDZRN3-205ENST00000466780 HAGHQ16775 308 aa11.28□□□□□ -0.6
PDZRN3-205ENST00000466780 FOXL2NBQ6ZUU3 175 aa11.28□□□□□ -0.6
PDZRN3-205ENST00000466780 SLC35G3Q8N808 338 aa11.28□□□□□ -0.6
PDZRN3-205ENST00000466780 C10orf35Q96D05 121 aa11.28□□□□□ -0.6
PDZRN3-205ENST00000466780 ZNF385AQ96PM9 386 aaKnown RBP11.28□□□□□ -0.6
PDZRN3-205ENST00000466780 TP53RKQ96S44 253 aa11.28□□□□□ -0.6
PDZRN3-205ENST00000466780 MTCH2Q9Y6C9 303 aa11.28□□□□□ -0.6
PDZRN3-205ENST00000466780 EML6Q6ZMW3 1958 aa11.27□□□□□ -0.6
PDZRN3-205ENST00000466780 IGSF23A1L1A6 192 aa11.27□□□□□ -0.61
PDZRN3-205ENST00000466780 CDRT15L2A8MXV6 281 aa11.27□□□□□ -0.61
PDZRN3-205ENST00000466780 PHF1O43189 567 aaPredicted RBP11.27□□□□□ -0.61
PDZRN3-205ENST00000466780 ITGA3P26006 1051 aa11.27□□□□□ -0.61
PDZRN3-205ENST00000466780 GUCA1AP43080 201 aaPredicted RBP11.27□□□□□ -0.61
PDZRN3-205ENST00000466780 PIGYQ3MUY2 71 aa11.27□□□□□ -0.61
PDZRN3-205ENST00000466780 HIKESHIQ53FT3 197 aa11.27□□□□□ -0.61
PDZRN3-205ENST00000466780 PYY3Q5JQD4 70 aa11.27□□□□□ -0.61
PDZRN3-205ENST00000466780 OR2B11Q5JQS5 317 aa11.27□□□□□ -0.61
PDZRN3-205ENST00000466780 OR10AD1Q8NGE0 317 aa11.27□□□□□ -0.61
PDZRN3-205ENST00000466780 TMEM54Q969K7 222 aa11.27□□□□□ -0.61
PDZRN3-205ENST00000466780 DMRT1Q9Y5R6 373 aa11.27□□□□□ -0.61
PDZRN3-205ENST00000466780 IGHV3-15A0A0B4J1V0 119 aa11.27□□□□□ -0.61
PDZRN3-205ENST00000466780 IGKV1-12A0A0C4DH73 117 aa11.27□□□□□ -0.61
PDZRN3-205ENST00000466780 RBFOX3A6NFN3 312 aa11.27□□□□□ -0.61
PDZRN3-205ENST00000466780 H3BQ15 152 aa11.27□□□□□ -0.61
PDZRN3-205ENST00000466780 TERTO14746 1132 aaKnown RBP11.27□□□□□ -0.61
PDZRN3-205ENST00000466780 GEMIN2O14893 280 aaKnown RBP11.27□□□□□ -0.61
PDZRN3-205ENST00000466780 PIAS2O75928 621 aa11.27□□□□□ -0.61
PDZRN3-205ENST00000466780 IGKV1D-12P01611 117 aa11.27□□□□□ -0.61
PDZRN3-205ENST00000466780 PNLIPP16233 465 aa11.27□□□□□ -0.61
PDZRN3-205ENST00000466780 ATP6V0CP27449 155 aa11.27□□□□□ -0.61
PDZRN3-205ENST00000466780 RAB2AP61019 212 aa11.27□□□□□ -0.61
PDZRN3-205ENST00000466780 H3F3AP84243 136 aa11.27□□□□□ -0.61
PDZRN3-205ENST00000466780 NKAIN1Q4KMZ8 207 aa11.27□□□□□ -0.61
PDZRN3-205ENST00000466780 CDPF1Q6NVV7 123 aa11.27□□□□□ -0.61
PDZRN3-205ENST00000466780 FBXL14Q8N1E6 418 aa11.27□□□□□ -0.61
PDZRN3-205ENST00000466780 OR5L2Q8NGL0 311 aa11.27□□□□□ -0.61
PDZRN3-205ENST00000466780 OR2G3Q8NGZ4 309 aa11.27□□□□□ -0.61
PDZRN3-205ENST00000466780 SLAMF9Q96A28 289 aa11.27□□□□□ -0.61
PDZRN3-205ENST00000466780 MOB3AQ96BX8 217 aa11.27□□□□□ -0.61
PDZRN3-205ENST00000466780 RAB39BQ96DA2 213 aa11.27□□□□□ -0.61
PDZRN3-205ENST00000466780 PLEK2Q9NYT0 353 aa11.27□□□□□ -0.61
PDZRN3-205ENST00000466780 HSD17B6O14756 317 aa11.26□□□□□ -0.61
PDZRN3-205ENST00000466780 NDUFS6O75380 124 aaKnown RBP11.26□□□□□ -0.61
PDZRN3-205ENST00000466780 AFF3P51826 1226 aaKnown RBP11.26□□□□□ -0.61
PDZRN3-205ENST00000466780 NXPH1P58417 271 aa11.26□□□□□ -0.61
PDZRN3-205ENST00000466780 RND3P61587 244 aa11.26□□□□□ -0.61
PDZRN3-205ENST00000466780 ZNF343Q6P1L6 599 aa11.26□□□□□ -0.61
PDZRN3-205ENST00000466780 MEX3BQ6ZN04 569 aaKnown RBP11.26□□□□□ -0.61
PDZRN3-205ENST00000466780 OR2C3Q8N628 320 aa11.26□□□□□ -0.61
PDZRN3-205ENST00000466780 FADS6Q8N9I5 356 aa11.26□□□□□ -0.61
PDZRN3-205ENST00000466780 ZFP62Q8NB50 900 aaPredicted RBP11.26□□□□□ -0.61
PDZRN3-205ENST00000466780 ZNF837Q96EG3 531 aaPredicted RBP11.26□□□□□ -0.61
PDZRN3-205ENST00000466780 RBM24Q9BX46 236 aaKnown RBP11.26□□□□□ -0.61
PDZRN3-205ENST00000466780 SMDT1Q9H4I9 107 aa11.26□□□□□ -0.61
PDZRN3-205ENST00000466780 NKX2-6A6NCS4 301 aa11.26□□□□□ -0.61
PDZRN3-205ENST00000466780 ZNF724A8MTY0 619 aa11.26□□□□□ -0.61
PDZRN3-205ENST00000466780 GATCO43716 136 aaKnown RBP11.26□□□□□ -0.61
PDZRN3-205ENST00000466780 DKK1O94907 266 aa11.26□□□□□ -0.61
PDZRN3-205ENST00000466780 SRP19P09132 144 aaKnown RBP11.26□□□□□ -0.61
PDZRN3-205ENST00000466780 CXCL1P09341 107 aa11.26□□□□□ -0.61
PDZRN3-205ENST00000466780 SRFP11831 508 aa11.26□□□□□ -0.61
PDZRN3-205ENST00000466780 CDX1P47902 265 aaPredicted RBP11.26□□□□□ -0.61
PDZRN3-205ENST00000466780 PRAMEF20Q5VT98 475 aa11.26□□□□□ -0.61
PDZRN3-205ENST00000466780 SP5Q6BEB4 398 aaPredicted RBP11.26□□□□□ -0.61
PDZRN3-205ENST00000466780 ZNF600Q6ZNG1 722 aa11.26□□□□□ -0.61
PDZRN3-205ENST00000466780 NAXEQ8NCW5 288 aa11.26□□□□□ -0.61
PDZRN3-205ENST00000466780 TMEM171Q8WVE6 324 aa11.26□□□□□ -0.61
PDZRN3-205ENST00000466780 SPSB1Q96BD6 273 aa11.26□□□□□ -0.61
PDZRN3-205ENST00000466780 NTNG2Q96CW9 530 aa11.26□□□□□ -0.61
PDZRN3-205ENST00000466780 JSRP1Q96MG2 331 aaPredicted RBP11.26□□□□□ -0.61
PDZRN3-205ENST00000466780 TMED3Q9Y3Q3 217 aa11.26□□□□□ -0.61
PDZRN3-205ENST00000466780 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.25□□□□□ -0.61
PDZRN3-205ENST00000466780 ZNF729A6NN14 1252 aaPredicted RBP11.25□□□□□ -0.61
PDZRN3-205ENST00000466780 H0YL77 283 aa11.25□□□□□ -0.61
PDZRN3-205ENST00000466780 DHHO43323 396 aa11.25□□□□□ -0.61
PDZRN3-205ENST00000466780 ZFAND5O76080 213 aa11.25□□□□□ -0.61
PDZRN3-205ENST00000466780 AADACP22760 399 aa11.25□□□□□ -0.61
PDZRN3-205ENST00000466780 NDUFA6P56556 154 aa11.25□□□□□ -0.61
PDZRN3-205ENST00000466780 GNMTQ14749 295 aa11.25□□□□□ -0.61
PDZRN3-205ENST00000466780 PDCD1Q15116 288 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms