RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 RPL35P42766 123 aaKnown RBP3.64□□□□□ -1.83
SDCBP-205ENST00000447267 ACTR3P61158 418 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 SLC35B1P78383 322 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 CDK10Q15131 360 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 TIGD6Q17RP2 521 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 ZNF674Q2M3X9 581 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 SLC36A2Q495M3 483 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 CXorf66Q5JRM2 361 aaPredicted RBP3.64□□□□□ -1.83
SDCBP-205ENST00000447267 UBE2UQ5VVX9 321 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 NANOGP8Q6NSW7 305 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 TEX38Q6PEX7 206 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 ZNF826PQ6ZT77 177 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 GPRIN3Q6ZVF9 776 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 DPPA2Q7Z7J5 298 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 CMC1Q7Z7K0 106 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 GTSCR1Q86UQ5 136 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 TIGD4Q8IY51 512 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 CENPLQ8N0S6 344 aaPredicted RBP3.64□□□□□ -1.83
SDCBP-205ENST00000447267 OR8H3Q8N146 312 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 SLC35F6Q8N357 371 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 COMMD1Q8N668 190 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 OR5D13Q8NGL4 314 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 OR13G1Q8NGZ3 307 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 MFSD8Q8NHS3 518 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 RHEBL1Q8TAI7 183 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 TMEM54Q969K7 222 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 MALSU1Q96EH3 234 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 APOPT1Q96IL0 206 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 C4orf45Q96LM5 186 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 OR7D2Q96RA2 312 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 NAT9Q9BTE0 207 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 TXLNGYQ9BZA5 131 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 ALX4Q9H161 411 aaPredicted RBP3.64□□□□□ -1.83
SDCBP-205ENST00000447267 SAV1Q9H4B6 383 aaPredicted RBP3.64□□□□□ -1.83
SDCBP-205ENST00000447267 HEXA-AS1Q9H8Q6 139 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 ELL3Q9HB65 397 aaPredicted RBP3.64□□□□□ -1.83
SDCBP-205ENST00000447267 TREM1Q9NP99 234 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 KAAG1Q9UBP8 84 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 COPS3Q9UNS2 423 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 STARD10Q9Y365 291 aa3.64□□□□□ -1.83
SDCBP-205ENST00000447267 FAT3Q8TDW7 4589 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 A0A0U1RQV5 110 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 A0A1B0GV90 55 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 A0A1W2PPI3 338 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 PQLC2LA1A4F0 135 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 IZUMO1RA6ND01 250 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 ACOT8O14734 319 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 SLC31A2O15432 143 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 NDUFB3O43676 98 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 ITM2AO43736 263 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 FMO6PO60774 539 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 OXTP01178 125 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 APOA1P02647 267 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 OR8U9P0C7N5 309 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 PRPS1L1P21108 318 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 GSTM3P21266 225 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 KIR3DL2P43630 455 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 CSNK1A1P48729 337 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 DYNLT3P51808 116 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 AKR1D1P51857 326 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 TAS2R60P59551 318 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 COPZ1P61923 177 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 HTD2P86397 168 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 EGR4Q05215 589 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 BTKQ06187 659 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 FUT5Q11128 374 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 EPS8Q12929 822 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 FLOT2Q14254 428 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 PNLIPRP3Q17RR3 467 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 MS4A18Q3C1V0 323 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 FAM98BQ52LJ0 330 aaKnown RBP3.63□□□□□ -1.83
SDCBP-205ENST00000447267 WDR38Q5JTN6 314 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 PIK3CD-AS1Q5SR53 167 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 TYW3Q6IPR3 259 aaKnown RBP3.63□□□□□ -1.83
SDCBP-205ENST00000447267 TTC27Q6P3X3 843 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 IZUMO2Q6UXV1 221 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 ZNF836Q6ZNA1 936 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 FAM122BQ7Z309 247 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 ZDHHC23Q8IYP9 409 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 PDIK1LQ8N165 341 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 C4orf33Q8N1A6 199 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 CADM2Q8N3J6 435 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 PTGR2Q8N8N7 351 aaPredicted RBP3.63□□□□□ -1.83
SDCBP-205ENST00000447267 BHLHE23Q8NDY6 225 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 OR8G5Q8NG78 346 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 OR5T2Q8NGG2 359 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 DEFB104AQ8WTQ1 72 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 TRUB1Q8WWH5 349 aaKnown RBP3.63□□□□□ -1.83
SDCBP-205ENST00000447267 UFD1Q92890 307 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 PTP4A1Q93096 173 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 MRPL48Q96GC5 212 aaKnown RBP3.63□□□□□ -1.83
SDCBP-205ENST00000447267 ZNF583Q96ND8 569 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 ZNF251Q9BRH9 671 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 PAPOLGQ9BWT3 736 aaKnown RBP3.63□□□□□ -1.83
SDCBP-205ENST00000447267 PARD6GQ9BYG4 376 aaPredicted RBP3.63□□□□□ -1.83
SDCBP-205ENST00000447267 CCDC134Q9H6E4 229 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 AAMDCQ9H7C9 122 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 NMRAL1Q9HBL8 299 aa3.63□□□□□ -1.83
SDCBP-205ENST00000447267 CHMP1AQ9HD42 196 aaPredicted RBP3.63□□□□□ -1.83
SDCBP-205ENST00000447267 GSN-AS1Q9NRJ2 163 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms