RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 Q96M85 177 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 TNFRSF13CQ96RJ3 184 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 ATP5SQ99766 215 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 PMCHL2Q9BQD1 86 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 SSBP4Q9BWG4 385 aaPredicted RBP4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 SMIM3Q9BZL3 60 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 LINC00597Q9H2U6 94 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 ZDHHC6Q9H6R6 413 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 DNAJB12Q9NXW2 375 aaKnown RBP4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 PEF1Q9UBV8 284 aaKnown RBP4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 CLN8Q9UBY8 286 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 GPR34Q9UPC5 381 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 HIF3AQ9Y2N7 669 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 PAM16Q9Y3D7 125 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 FRMPD3Q5JV73 1810 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 NUP210LQ5VU65 1888 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 CKAP5Q14008 2032 aa4.94□□□□□ -1.62
VTI1BP4-201ENST00000427516 NPIPA5A0A0B4J1W7 369 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 A0A1B0GVT2 93 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 C17orf102A2RUQ5 167 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 NPIPB15A6NHN6 443 aaPredicted RBP4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 CASTOR2A6NHX0 329 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 VSTM2BA6NLU5 285 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 MEIS3P2A8K0S8 358 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 DIRC3C9JPN6 131 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 NPIPA5E9PKD4 350 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 NPIPA3F8WFD2 350 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 M0R1X1 148 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 CORTO00230 105 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 COCHO43405 550 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 FRS3O43559 492 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 TSPAN6O43657 245 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 PDE6DO43924 150 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 ZNF253O75346 499 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 LEFTY1O75610 366 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 PIAS2O75928 621 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 DDAH2O95865 285 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 APBA3O96018 575 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 SERPINA7P05543 415 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 CRISP2P16562 243 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 SELEP16581 610 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 ZNF20P17024 532 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 KLK2P20151 261 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 ALOX5APP20292 161 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 HIST1H1TP22492 207 aaPredicted RBP4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 UCP1P25874 307 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 ATP6V0CP27449 155 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 BCL6P41182 706 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 CCL23P55773 120 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 RPS4XP62701 263 aaKnown RBP4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 RPS24P62847 133 aaKnown RBP4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 MEF2BQ02080 365 aaPredicted RBP4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 RBPJQ06330 500 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 FMODQ06828 376 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 Q0VG73 95 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 TCEA2Q15560 299 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 ANKRD55Q3KP44 614 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 DUSP28Q4G0W2 176 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 OR10J3Q5JRS4 329 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 WDR38Q5JTN6 314 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 SPIN3Q5JUX0 258 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 TPTE2P1Q5T6R2 138 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 RAET1LQ5VY80 246 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 FAM90A2PQ658T7 463 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 KIAA0895LQ68EN5 471 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 PRSS57Q6UWY2 283 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 ZNF765Q7L2R6 523 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 C16orf82Q7Z2V1 217 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 LHFPL4Q7Z7J7 247 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 MEX3DQ86XN8 651 aaKnown RBP4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 BAGE3Q86Y29 109 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 BAGE2Q86Y30 109 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 LYG1Q8N1E2 194 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 Q8N3U1 123 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 ZFP62Q8NB50 900 aaPredicted RBP4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 CADM4Q8NFZ8 388 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 OR10S1Q8NGN2 331 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 MBD3L1Q8WWY6 194 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 SUSD6Q92537 303 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 EVPLQ92817 2033 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 TMEM230Q96A57 120 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 BORCS7Q96B45 105 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 SPSB1Q96BD6 273 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 GPR146Q96CH1 333 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 ALG14Q96F25 216 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 WDYHV1Q96HA8 205 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 LINC00615Q96LM1 132 aaPredicted RBP4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 IL17FQ96PD4 163 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 TSPAN32Q96QS1 320 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 NMNAT3Q96T66 252 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 RARRES2Q99969 163 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 CCDC3Q9BQI4 270 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 WFDC6Q9BQY6 131 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 NICN1Q9BSH3 213 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 TMEM59Q9BXS4 323 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 TTTY10Q9BZA0 68 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 LPAR5Q9H1C0 372 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 ZNF703Q9H7S9 590 aaPredicted RBP4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 NAA60Q9H7X0 242 aa4.93□□□□□ -1.62
VTI1BP4-201ENST00000427516 CALHM2Q9HA72 323 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms