RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 POLR2IP36954 125 aaKnown RBP3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 NUTF2P61970 127 aaKnown RBP3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 TBPL1P62380 186 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 RPS21P63220 83 aaKnown RBP3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 PMS2P3Q13401 168 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 ILKQ13418 452 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 C16orf72Q14CZ0 275 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 RGNQ15493 299 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 HIKESHIQ53FT3 197 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 RBM48Q5RL73 367 aaKnown RBP3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 THEM4Q5T1C6 240 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 OR2T5Q6IEZ7 315 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 FAM71E1Q6IPT2 247 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 ADNP2Q6IQ32 1131 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 ZNF773Q6PK81 442 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 ABHD13Q7L211 337 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 COMMD6Q7Z4G1 85 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 HDDC2Q7Z4H3 204 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 HS3ST5Q8IZT8 346 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 C8orf59Q8N0T1 100 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 KIR2DL5AQ8N109 375 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 FAM71E2Q8N5Q1 922 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 LINC01555Q8NAE3 123 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 SUMF2Q8NBJ7 301 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 HSD17B11Q8NBQ5 300 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 ZNF555Q8NEP9 628 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 NPBQ8NG41 125 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 OR2T29Q8NH02 315 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 KIR2DL5BQ8NHK3 375 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 CDC26Q8NHZ8 85 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 ZNF420Q8TAQ5 688 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 ZFP90Q8TF47 636 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 C16orf78Q8WTQ4 265 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 TFGQ92734 400 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 NRBF2Q96F24 287 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 GABARAPL3Q9BY60 117 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 UCK2Q9BZX2 261 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 SPNS1Q9H2V7 528 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 OR51B5Q9H339 312 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 CXorf21Q9HAI6 301 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 ZNF226Q9NYT6 803 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 AHSPQ9NZD4 102 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 ZNF629Q9UEG4 869 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 SLC23A2Q9UGH3 650 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 C3orf18Q9UK00 162 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 ZNF256Q9Y2P7 627 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 KCNE3Q9Y6H6 103 aa3.34□□□□□ -1.87
HMGB3P18-201ENST00000406327 MYLKQ15746 1914 aa3.34□□□□□ -1.88
HMGB3P18-201ENST00000406327 GREB1Q4ZG55 1949 aa3.34□□□□□ -1.88
HMGB3P18-201ENST00000406327 TANC1Q9C0D5 1861 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 CHD5Q8TDI0 1954 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 hCG_2039718K7EN88 272 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 M0QX08 132 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 KMOO15229 486 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 ICOSLGO75144 302 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 E2F6O75461 281 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 HSBP1O75506 76 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 SEMA3DO95025 777 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 RAB3DO95716 219 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 RPN2P04844 631 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 FABP3P05413 133 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 KLK1P06870 262 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 ERGP11308 486 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 MGMTP16455 207 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 TEAD1P28347 426 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 SERPINB1P30740 379 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 DRD3P35462 400 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 RBMXP38159 391 aaKnown RBP3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 DAPP51397 102 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 FGF8P55075 233 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 SELENOWP63302 87 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 HBA1P69905 142 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 C2orf80Q0P641 193 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 FADDQ13158 208 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 QPRTQ15274 297 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 OR7A5Q15622 319 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 KRTAP27-1Q3LI81 207 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 NKAIN1Q4KMZ8 207 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 ZNF691Q5VV52 312 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 UBE2UQ5VVX9 321 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 KDM4DQ6B0I6 523 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 LAIR2Q6ISS4 152 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 H3F3CQ6NXT2 135 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 DHRS4L2Q6PKH6 230 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 COX15Q7KZN9 410 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 CYP4Z1Q86W10 505 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 CLVS1Q8IUQ0 354 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 INO80EQ8NBZ0 244 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 PROKR2Q8NFJ6 384 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 OR4A15Q8NGL6 344 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 OR5AR1Q8NGP9 310 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 C12orf43Q96C57 262 aaKnown RBP3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 PPCDCQ96CD2 204 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 TM4SF18Q96CE8 201 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 ISOC1Q96CN7 298 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 OR2M2Q96R28 347 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 DOK1Q99704 481 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 NRTNQ99748 197 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 AIF1LQ9BQI0 150 aa3.33□□□□□ -1.88
HMGB3P18-201ENST00000406327 DOHHQ9BU89 302 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms