RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 PJVKQ0ZLH3 352 aa20.59■□□□□ 0.89
PABPN1-202ENST00000397276 EIF3IQ13347 325 aaKnown RBP20.59■□□□□ 0.89
PABPN1-202ENST00000397276 TUSC5Q8IXB3 177 aa20.59■□□□□ 0.89
PABPN1-202ENST00000397276 OR51F2Q8NH61 342 aa20.59■□□□□ 0.89
PABPN1-202ENST00000397276 OR10C1Q96KK4 312 aa20.59■□□□□ 0.89
PABPN1-202ENST00000397276 SCGB3A2Q96PL1 93 aa20.59■□□□□ 0.89
PABPN1-202ENST00000397276 AK3Q9UIJ7 227 aa20.59■□□□□ 0.89
PABPN1-202ENST00000397276 FREM1Q5H8C1 2179 aa20.59■□□□□ 0.89
PABPN1-202ENST00000397276 IGKV1-12A0A0C4DH73 117 aa20.59■□□□□ 0.89
PABPN1-202ENST00000397276 IGKV1D-12P01611 117 aa20.59■□□□□ 0.89
PABPN1-202ENST00000397276 DMBX1Q8NFW5 382 aa20.59■□□□□ 0.89
PABPN1-202ENST00000397276 DDA1Q9BW61 102 aa20.59■□□□□ 0.89
PABPN1-202ENST00000397276 RCC2Q9P258 522 aaKnown RBP20.59■□□□□ 0.89
PABPN1-202ENST00000397276 ZMAT5Q9UDW3 170 aaKnown RBP20.59■□□□□ 0.89
PABPN1-202ENST00000397276 COL27A1Q8IZC6 1860 aaPredicted RBP20.59■□□□□ 0.89
PABPN1-202ENST00000397276 CEACAM18A8MTB9 384 aa20.58■□□□□ 0.89
PABPN1-202ENST00000397276 OR1C1Q15619 314 aa20.58■□□□□ 0.89
PABPN1-202ENST00000397276 C3AR1Q16581 482 aa20.58■□□□□ 0.89
PABPN1-202ENST00000397276 TMEM164Q5U3C3 297 aa20.58■□□□□ 0.89
PABPN1-202ENST00000397276 PLCXD3Q63HM9 321 aa20.58■□□□□ 0.89
PABPN1-202ENST00000397276 DHRS13Q6UX07 377 aa20.58■□□□□ 0.89
PABPN1-202ENST00000397276 FOXRED2Q8IWF2 684 aa20.58■□□□□ 0.89
PABPN1-202ENST00000397276 FAM173AQ9BQD7 235 aa20.58■□□□□ 0.89
PABPN1-202ENST00000397276 COLCA2A8K830 154 aa20.58■□□□□ 0.88
PABPN1-202ENST00000397276 SFTPBP07988 381 aa20.58■□□□□ 0.88
PABPN1-202ENST00000397276 EDN3P14138 238 aa20.58■□□□□ 0.88
PABPN1-202ENST00000397276 HABP2Q14520 560 aaPredicted RBP20.58■□□□□ 0.88
PABPN1-202ENST00000397276 TGIF1Q15583 401 aa20.58■□□□□ 0.88
PABPN1-202ENST00000397276 RIPPLY2Q5TAB7 128 aa20.58■□□□□ 0.88
PABPN1-202ENST00000397276 ZNF703Q9H7S9 590 aaPredicted RBP20.58■□□□□ 0.88
PABPN1-202ENST00000397276 IL17BQ9UHF5 180 aa20.58■□□□□ 0.88
PABPN1-202ENST00000397276 ZNF883P0CG24 379 aa20.57■□□□□ 0.88
PABPN1-202ENST00000397276 CD59P13987 128 aa20.57■□□□□ 0.88
PABPN1-202ENST00000397276 RCC1P18754 421 aaPredicted RBP20.57■□□□□ 0.88
PABPN1-202ENST00000397276 PCBD1P61457 104 aa20.57■□□□□ 0.88
PABPN1-202ENST00000397276 FNDC9Q8TBE3 224 aa20.57■□□□□ 0.88
PABPN1-202ENST00000397276 SULT4A1Q9BR01 284 aa20.57■□□□□ 0.88
PABPN1-202ENST00000397276 LOC400499M0QZD8 3231 aa20.57■□□□□ 0.88
PABPN1-202ENST00000397276 HOXB1P14653 301 aaPredicted RBP20.57■□□□□ 0.88
PABPN1-202ENST00000397276 LHX2P50458 406 aa20.57■□□□□ 0.88
PABPN1-202ENST00000397276 ARF1P84077 181 aaKnown RBP20.57■□□□□ 0.88
PABPN1-202ENST00000397276 FBXL14Q8N1E6 418 aa20.57■□□□□ 0.88
PABPN1-202ENST00000397276 CCDC54Q8NEL0 328 aa20.57■□□□□ 0.88
PABPN1-202ENST00000397276 NMES1Q9C002 83 aa20.57■□□□□ 0.88
PABPN1-202ENST00000397276 LPAR3Q9UBY5 353 aa20.57■□□□□ 0.88
PABPN1-202ENST00000397276 hCG_38984A0A1B0GV85 526 aa20.57■□□□□ 0.88
PABPN1-202ENST00000397276 M0R296 226 aa20.57■□□□□ 0.88
PABPN1-202ENST00000397276 HLA-HP01893 362 aa20.57■□□□□ 0.88
PABPN1-202ENST00000397276 LPAR6P43657 344 aa20.57■□□□□ 0.88
PABPN1-202ENST00000397276 DCAF10Q5QP82 559 aa20.57■□□□□ 0.88
PABPN1-202ENST00000397276 C14orf166Q9Y224 244 aaKnown RBP20.57■□□□□ 0.88
PABPN1-202ENST00000397276 R4GN57 208 aa20.57■□□□□ 0.88
PABPN1-202ENST00000397276 ZNF407Q9C0G0 2248 aa20.57■□□□□ 0.88
PABPN1-202ENST00000397276 FAM186AA6NE01 2351 aa20.56■□□□□ 0.88
PABPN1-202ENST00000397276 ZNF850A8MQ14 1090 aa20.56■□□□□ 0.88
PABPN1-202ENST00000397276 MMP7P09237 267 aaPredicted RBP20.56■□□□□ 0.88
PABPN1-202ENST00000397276 SFTA3P0C7M3 94 aa20.56■□□□□ 0.88
PABPN1-202ENST00000397276 PEA15Q15121 130 aa20.56■□□□□ 0.88
PABPN1-202ENST00000397276 PRRG4Q9BZD6 226 aa20.56■□□□□ 0.88
PABPN1-202ENST00000397276 MRPS18CQ9Y3D5 142 aaKnown RBP20.56■□□□□ 0.88
PABPN1-202ENST00000397276 CDX4O14627 284 aaPredicted RBP20.56■□□□□ 0.88
PABPN1-202ENST00000397276 RPS2P15880 293 aaKnown RBP20.56■□□□□ 0.88
PABPN1-202ENST00000397276 NME2P22392 152 aa20.56■□□□□ 0.88
PABPN1-202ENST00000397276 IGSF11Q5DX21 431 aa20.56■□□□□ 0.88
PABPN1-202ENST00000397276 LHFPL2Q6ZUX7 228 aa20.56■□□□□ 0.88
PABPN1-202ENST00000397276 TOMM40LQ969M1 308 aa20.56■□□□□ 0.88
PABPN1-202ENST00000397276 TTTY12Q9BZ98 90 aa20.56■□□□□ 0.88
PABPN1-202ENST00000397276 LIME1Q9H400 295 aa20.56■□□□□ 0.88
PABPN1-202ENST00000397276 ANXA10Q9UJ72 324 aa20.56■□□□□ 0.88
PABPN1-202ENST00000397276 ST3GAL6Q9Y274 331 aa20.56■□□□□ 0.88
PABPN1-202ENST00000397276 DNAJC13O75165 2243 aa20.55■□□□□ 0.88
PABPN1-202ENST00000397276 LRP3O75074 770 aa20.55■□□□□ 0.88
PABPN1-202ENST00000397276 PTGER4P35408 488 aa20.55■□□□□ 0.88
PABPN1-202ENST00000397276 F2RL1P55085 397 aa20.55■□□□□ 0.88
PABPN1-202ENST00000397276 PLGLB1Q02325 96 aa20.55■□□□□ 0.88
PABPN1-202ENST00000397276 ARL6IP1Q15041 203 aa20.55■□□□□ 0.88
PABPN1-202ENST00000397276 OR10AD1Q8NGE0 317 aa20.55■□□□□ 0.88
PABPN1-202ENST00000397276 PARP12Q9H0J9 701 aaKnown RBP20.55■□□□□ 0.88
PABPN1-202ENST00000397276 RAB18Q9NP72 206 aa20.55■□□□□ 0.88
PABPN1-202ENST00000397276 SLC7A11Q9UPY5 501 aa20.55■□□□□ 0.88
PABPN1-202ENST00000397276 TRBV6-7A0A0A0MS04 114 aa20.55■□□□□ 0.88
PABPN1-202ENST00000397276 OR5H8P0DN80 308 aa20.55■□□□□ 0.88
PABPN1-202ENST00000397276 CYCSP99999 105 aaKnown RBP20.55■□□□□ 0.88
PABPN1-202ENST00000397276 KRTAP27-1Q3LI81 207 aa20.55■□□□□ 0.88
PABPN1-202ENST00000397276 CALHM1Q8IU99 346 aa20.55■□□□□ 0.88
PABPN1-202ENST00000397276 CLCC1Q96S66 551 aa20.55■□□□□ 0.88
PABPN1-202ENST00000397276 MED13Q9UHV7 2174 aa20.55■□□□□ 0.88
PABPN1-202ENST00000397276 SPINK2P20155 84 aa20.54■□□□□ 0.88
PABPN1-202ENST00000397276 CD80P33681 288 aa20.54■□□□□ 0.88
PABPN1-202ENST00000397276 CLDN18P56856 261 aa20.54■□□□□ 0.88
PABPN1-202ENST00000397276 S100A10P60903 97 aa20.54■□□□□ 0.88
PABPN1-202ENST00000397276 B4GALT7Q9UBV7 327 aa20.54■□□□□ 0.88
PABPN1-202ENST00000397276 A0A1W2PPE3 182 aa20.54■□□□□ 0.88
PABPN1-202ENST00000397276 RNASEK-C17orf49H0YIS7 233 aa20.54■□□□□ 0.88
PABPN1-202ENST00000397276 MT-CO3P00414 261 aa20.54■□□□□ 0.88
PABPN1-202ENST00000397276 S100A12P80511 92 aa20.54■□□□□ 0.88
PABPN1-202ENST00000397276 RAB32Q13637 225 aa20.54■□□□□ 0.88
PABPN1-202ENST00000397276 RPL7L1Q6DKI1 246 aaKnown RBP20.54■□□□□ 0.88
PABPN1-202ENST00000397276 OSR2Q8N2R0 312 aa20.54■□□□□ 0.88
PABPN1-202ENST00000397276 C14orf79Q96F83 325 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms