RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 OR2A5Q96R48 311 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 PYGO2Q9BRQ0 406 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 HCAR1Q9BXC0 346 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 SMIM3Q9BZL3 60 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 PHPT1Q9NRX4 125 aaPredicted RBP5.83□□□□□ -1.48
ZNF540-201ENST00000316433 SLC35D1Q9NTN3 355 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 LAMP3Q9UQV4 416 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 WSB1Q9Y6I7 421 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 E5RGE8 158 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 G3V4G9 280 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 HSPB1P04792 205 aaKnown RBP5.83□□□□□ -1.48
ZNF540-201ENST00000316433 ZNF28P17035 718 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 EFNB2P52799 333 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 FAM3BP58499 235 aaPredicted RBP5.83□□□□□ -1.48
ZNF540-201ENST00000316433 STAC2Q6ZMT1 411 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 ZNF709Q8N972 641 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 MRPL43Q8N983 215 aaKnown RBP5.83□□□□□ -1.48
ZNF540-201ENST00000316433 ADAD2Q8NCV1 583 aaKnown RBP5.83□□□□□ -1.48
ZNF540-201ENST00000316433 ADAMTS15Q8TE58 950 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 SLC41A2Q96JW4 573 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 RAB18Q9NP72 206 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 MSRAQ9UJ68 235 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 RFNGQ9Y644 331 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 EXPH5Q8NEV8 1989 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 A0A1W2PS29 197 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 MED19A0JLT2 244 aaPredicted RBP5.83□□□□□ -1.48
ZNF540-201ENST00000316433 GAGE12BA1L429 117 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 CDC14CA4D256 554 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 RBFOX2O43251 390 aaKnown RBP eCLIP5.83□□□□□ -1.48
ZNF540-201ENST00000316433 LIPFP07098 398 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 MSR1P21757 451 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 DRD3P35462 400 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 APOBEC1P41238 236 aaKnown RBP5.83□□□□□ -1.48
ZNF540-201ENST00000316433 ARRB1P49407 418 aaPredicted RBP5.83□□□□□ -1.48
ZNF540-201ENST00000316433 CNN1P51911 297 aaKnown RBP5.83□□□□□ -1.48
ZNF540-201ENST00000316433 UBE2NP61088 152 aaKnown RBP5.83□□□□□ -1.48
ZNF540-201ENST00000316433 TLE3Q04726 772 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 ACTL10Q5JWF8 245 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 MRPL21Q7Z2W9 205 aaKnown RBP5.83□□□□□ -1.48
ZNF540-201ENST00000316433 RFLNBQ8N5W9 214 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 OR1K1Q8NGR3 316 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 FAM213BQ8TBF2 198 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 VN1R17PQ8TDU5 208 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 CTDSP1Q9GZU7 261 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 PGPEP1Q9NXJ5 209 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 HCSTQ9UBK5 93 aa5.83□□□□□ -1.48
ZNF540-201ENST00000316433 ADAMTS20P59510 1910 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 SRCAPQ6ZRS2 3230 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 HEATR5AQ86XA9 2040 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 MEGF11A6BM72 1044 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 ALG1L2C9J202 215 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 NRG2O14511 850 aaPredicted RBP5.82□□□□□ -1.48
ZNF540-201ENST00000316433 FRS3O43559 492 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 GPR75O95800 540 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 IGLV3-19P01714 112 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 CEACAM5P06731 702 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 ASAH2BP0C7U1 165 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 ADRA2CP18825 462 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 CD33P20138 364 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 DUSP3P51452 185 aaPredicted RBP5.82□□□□□ -1.48
ZNF540-201ENST00000316433 CLEC18BQ6UXF7 455 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 DPPA3Q6W0C5 159 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 SLC38A9Q8NBW4 561 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 OR1N2Q8NGR9 330 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 ASB5Q8WWX0 329 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 MRGPRFQ96AM1 343 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 CCDC74AQ96AQ1 378 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 C2orf50Q96LR7 162 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 MACROD1Q9BQ69 325 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 KIAA1456Q9P272 454 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 TBL2Q9Y4P3 447 aaKnown RBP5.82□□□□□ -1.48
ZNF540-201ENST00000316433 LIPGQ9Y5X9 500 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 KCNE3Q9Y6H6 103 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 BORCS7-ASMTA0A0B4J1R7 106 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 IGHV1-69-2A0A0G2JMI3 117 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 G3V3Y1 287 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 SLC17A2O00624 439 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 ATXN7O15265 892 aaPredicted RBP5.82□□□□□ -1.48
ZNF540-201ENST00000316433 HYPMO75409 117 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 STK17BO94768 372 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 IGLC2P0DOY2 106 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 IGLC3P0DOY3 106 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 CCNOP22674 350 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 CTRLP40313 264 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 SLC6A8P48029 635 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 TAS2R30P59541 319 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 YPEL5P62699 121 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 RPS21P63220 83 aaKnown RBP5.82□□□□□ -1.48
ZNF540-201ENST00000316433 CCL20P78556 96 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 FUT7Q11130 342 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 ICAM4Q14773 271 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 SLC17A1Q14916 467 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 TCEA2Q15560 299 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 TMEM176BQ3YBM2 270 aaPredicted RBP5.82□□□□□ -1.48
ZNF540-201ENST00000316433 CST9LP1Q5W188 147 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 WDR25Q64LD2 544 aaPredicted RBP5.82□□□□□ -1.48
ZNF540-201ENST00000316433 TMEM184AQ6ZMB5 413 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.82□□□□□ -1.48
ZNF540-201ENST00000316433 Q6ZWC4 215 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 SYT13Q7L8C5 426 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms