RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 APOBEC3DQ96AK3 386 aaPredicted RBP15.48■□□□□ 0.07
GNE-204ENST00000539208 PIK3IP1Q96FE7 263 aa15.48■□□□□ 0.07
GNE-204ENST00000539208 OR10C1Q96KK4 312 aa15.48■□□□□ 0.07
GNE-204ENST00000539208 PQLC2LA1A4F0 135 aa15.47■□□□□ 0.07
GNE-204ENST00000539208 FAM90A10PA6NDY2 464 aa15.47■□□□□ 0.07
GNE-204ENST00000539208 FAM90A18PA6NE21 464 aa15.47■□□□□ 0.07
GNE-204ENST00000539208 FAM90A16PA6NEW6 464 aa15.47■□□□□ 0.07
GNE-204ENST00000539208 FAM90A20PA6NIJ5 464 aa15.47■□□□□ 0.07
GNE-204ENST00000539208 CRYM-AS1A6NIL9 109 aa15.47■□□□□ 0.07
GNE-204ENST00000539208 FAM90A8PA6NJQ4 464 aa15.47■□□□□ 0.07
GNE-204ENST00000539208 FAM90A7PA6NKC0 464 aa15.47■□□□□ 0.07
GNE-204ENST00000539208 FAM90A22PA8MWA6 464 aa15.47■□□□□ 0.07
GNE-204ENST00000539208 FAM90A12PA8MX19 464 aa15.47■□□□□ 0.07
GNE-204ENST00000539208 FAM90A5PA8MXJ8 464 aa15.47■□□□□ 0.07
GNE-204ENST00000539208 FAM90A23PA8MXZ1 464 aa15.47■□□□□ 0.07
GNE-204ENST00000539208 SS18L1O75177 396 aaPredicted RBP15.47■□□□□ 0.07
GNE-204ENST00000539208 HLA-HP01893 362 aa15.47■□□□□ 0.07
GNE-204ENST00000539208 FAM90A15PP0C7V4 464 aa15.47■□□□□ 0.07
GNE-204ENST00000539208 FAM90A13PP0C7W8 464 aa15.47■□□□□ 0.07
GNE-204ENST00000539208 FAM90A14PP0C7W9 464 aa15.47■□□□□ 0.07
GNE-204ENST00000539208 FAM90A24PP0C7X0 464 aa15.47■□□□□ 0.07
GNE-204ENST00000539208 NAAAQ02083 359 aa15.47■□□□□ 0.07
GNE-204ENST00000539208 MALLQ13021 153 aa15.47■□□□□ 0.07
GNE-204ENST00000539208 SLC10A1Q14973 349 aa15.47■□□□□ 0.07
GNE-204ENST00000539208 CALHM1Q8IU99 346 aa15.47■□□□□ 0.07
GNE-204ENST00000539208 SAXO1Q8IYX7 474 aa15.47■□□□□ 0.07
GNE-204ENST00000539208 C1QTNF6Q9BXI9 259 aa15.47■□□□□ 0.07
GNE-204ENST00000539208 PRR13Q9NZ81 148 aa15.47■□□□□ 0.07
GNE-204ENST00000539208 MPTX1A8MV57 137 aa15.46■□□□□ 0.07
GNE-204ENST00000539208 PRSS44E7EML9 344 aa15.46■□□□□ 0.07
GNE-204ENST00000539208 CST4P01036 141 aa15.46■□□□□ 0.07
GNE-204ENST00000539208 PET100P0DJ07 73 aa15.46■□□□□ 0.07
GNE-204ENST00000539208 CD46P15529 392 aa15.46■□□□□ 0.07
GNE-204ENST00000539208 NUP62P37198 522 aaPredicted RBP15.46■□□□□ 0.07
GNE-204ENST00000539208 RBMXP38159 391 aaKnown RBP15.46■□□□□ 0.07
GNE-204ENST00000539208 FOXG1P55316 489 aaPredicted RBP15.46■□□□□ 0.07
GNE-204ENST00000539208 SNTB1Q13884 538 aaKnown RBP15.46■□□□□ 0.07
GNE-204ENST00000539208 C9orf135Q5VTT2 229 aa15.46■□□□□ 0.07
GNE-204ENST00000539208 TMEM211Q6ICI0 200 aa15.46■□□□□ 0.07
GNE-204ENST00000539208 ZNF611Q8N823 705 aa15.46■□□□□ 0.07
GNE-204ENST00000539208 LINC00052Q96N35 136 aa15.46■□□□□ 0.07
GNE-204ENST00000539208 BARX1Q9HBU1 254 aaPredicted RBP15.46■□□□□ 0.07
GNE-204ENST00000539208 MEMO1Q9Y316 297 aa15.46■□□□□ 0.07
GNE-204ENST00000539208 C5orf49A4QMS7 147 aa15.46■□□□□ 0.07
GNE-204ENST00000539208 ZSCAN5BA6NJL1 495 aa15.46■□□□□ 0.07
GNE-204ENST00000539208 B8ZZF3 427 aa15.46■□□□□ 0.07
GNE-204ENST00000539208 FUT3P21217 361 aa15.46■□□□□ 0.07
GNE-204ENST00000539208 OPRM1P35372 400 aa15.46■□□□□ 0.07
GNE-204ENST00000539208 OR56B2PQ8NGI1 322 aa15.46■□□□□ 0.07
GNE-204ENST00000539208 RRNAD1Q96FB5 475 aaKnown RBP15.46■□□□□ 0.07
GNE-204ENST00000539208 CCDC120Q96HB5 630 aa15.46■□□□□ 0.07
GNE-204ENST00000539208 AQP10Q96PS8 301 aa15.46■□□□□ 0.07
GNE-204ENST00000539208 LIME1Q9H400 295 aa15.46■□□□□ 0.07
GNE-204ENST00000539208 DNAJB11Q9UBS4 358 aa15.46■□□□□ 0.07
GNE-204ENST00000539208 GPR160Q9UJ42 338 aa15.46■□□□□ 0.07
GNE-204ENST00000539208 ELP2Q6IA86 826 aa15.45■□□□□ 0.06
GNE-204ENST00000539208 DPPA2Q7Z7J5 298 aa15.45■□□□□ 0.06
GNE-204ENST00000539208 MCEMP1Q8IX19 187 aa15.45■□□□□ 0.06
GNE-204ENST00000539208 IL22RA1Q8N6P7 574 aa15.45■□□□□ 0.06
GNE-204ENST00000539208 SHARPINQ9H0F6 387 aa15.45■□□□□ 0.06
GNE-204ENST00000539208 OPA3Q9H6K4 179 aa15.45■□□□□ 0.06
GNE-204ENST00000539208 ZNF286AQ9HBT8 521 aa15.45■□□□□ 0.06
GNE-204ENST00000539208 TMA7Q9Y2S6 64 aaKnown RBP15.45■□□□□ 0.06
GNE-204ENST00000539208 GPR179Q6PRD1 2367 aa15.45■□□□□ 0.06
GNE-204ENST00000539208 ZNF503-AS2A6NEH8 195 aa15.45■□□□□ 0.06
GNE-204ENST00000539208 TPD52L2O43399 206 aaKnown RBP15.45■□□□□ 0.06
GNE-204ENST00000539208 RAB1AP62820 205 aa15.45■□□□□ 0.06
GNE-204ENST00000539208 PRDX4Q13162 271 aa15.45■□□□□ 0.06
GNE-204ENST00000539208 CEACAM21Q3KPI0 293 aa15.45■□□□□ 0.06
GNE-204ENST00000539208 FAM74A1Q5RGS3 127 aa15.45■□□□□ 0.06
GNE-204ENST00000539208 SLC25A26Q70HW3 274 aa15.45■□□□□ 0.06
GNE-204ENST00000539208 TMEM200AQ86VY9 491 aa15.45■□□□□ 0.06
GNE-204ENST00000539208 SLC30A7Q8NEW0 376 aa15.45■□□□□ 0.06
GNE-204ENST00000539208 POM121L2Q96KW2 1035 aa15.45■□□□□ 0.06
GNE-204ENST00000539208 C12orf4Q9NQ89 552 aa15.45■□□□□ 0.06
GNE-204ENST00000539208 AHCTF1Q8WYP5 2266 aa15.44■□□□□ 0.06
GNE-204ENST00000539208 ZNF728P0DKX0 622 aa15.44■□□□□ 0.06
GNE-204ENST00000539208 TPT1P13693 172 aaKnown RBP15.44■□□□□ 0.06
GNE-204ENST00000539208 SOX8P57073 446 aa15.44■□□□□ 0.06
GNE-204ENST00000539208 RBM39Q14498 530 aaKnown RBP15.44■□□□□ 0.06
GNE-204ENST00000539208 DAZAP2Q15038 168 aaPredicted RBP15.44■□□□□ 0.06
GNE-204ENST00000539208 MRPL21Q7Z2W9 205 aaKnown RBP15.44■□□□□ 0.06
GNE-204ENST00000539208 NUFIP2Q7Z417 695 aaKnown RBP15.44■□□□□ 0.06
GNE-204ENST00000539208 C17orf50Q8WW18 174 aa15.44■□□□□ 0.06
GNE-204ENST00000539208 PAPOLGQ9BWT3 736 aaKnown RBP15.44■□□□□ 0.06
GNE-204ENST00000539208 CYTL1Q9NRR1 136 aa15.44■□□□□ 0.06
GNE-204ENST00000539208 OR5AC2Q9NZP5 309 aa15.44■□□□□ 0.06
GNE-204ENST00000539208 KCNAB3O43448 404 aa15.43■□□□□ 0.06
GNE-204ENST00000539208 SCO1O75880 301 aa15.43■□□□□ 0.06
GNE-204ENST00000539208 HOXB5P09067 269 aa15.43■□□□□ 0.06
GNE-204ENST00000539208 CD79AP11912 226 aa15.43■□□□□ 0.06
GNE-204ENST00000539208 CCNOP22674 350 aa15.43■□□□□ 0.06
GNE-204ENST00000539208 UCP3P55916 312 aa15.43■□□□□ 0.06
GNE-204ENST00000539208 RAB32Q13637 225 aa15.43■□□□□ 0.06
GNE-204ENST00000539208 TUSC1Q2TAM9 212 aa15.43■□□□□ 0.06
GNE-204ENST00000539208 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.43■□□□□ 0.06
GNE-204ENST00000539208 GALNT14Q96FL9 552 aa15.43■□□□□ 0.06
GNE-204ENST00000539208 KCNIP3Q9Y2W7 256 aa15.43■□□□□ 0.06
GNE-204ENST00000539208 WDFY4Q6ZS81 3184 aa15.43■□□□□ 0.06
GNE-204ENST00000539208 BDP1A6H8Y1 2624 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms