RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 RXFP4Q8TDU9 374 aa3.42□□□□□ -1.86
HMGB1P3-201ENST00000502802 SRSF12Q8WXF0 261 aaKnown RBP3.42□□□□□ -1.86
HMGB1P3-201ENST00000502802 ATP6V1G3Q96LB4 118 aa3.42□□□□□ -1.86
HMGB1P3-201ENST00000502802 PAIP2Q9BPZ3 127 aaKnown RBP3.42□□□□□ -1.86
HMGB1P3-201ENST00000502802 EMC6Q9BV81 110 aa3.42□□□□□ -1.86
HMGB1P3-201ENST00000502802 SLC17A9Q9BYT1 436 aa3.42□□□□□ -1.86
HMGB1P3-201ENST00000502802 FRMD8P1Q9BZ68 369 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P3-201ENST00000502802 C6orf50Q9HD87 102 aa3.42□□□□□ -1.86
HMGB1P3-201ENST00000502802 VAPAQ9P0L0 249 aa3.42□□□□□ -1.86
HMGB1P3-201ENST00000502802 ZNF222Q9UK12 451 aa3.42□□□□□ -1.86
HMGB1P3-201ENST00000502802 TBX21Q9UL17 535 aa3.42□□□□□ -1.86
HMGB1P3-201ENST00000502802 SPTBN5Q9NRC6 3674 aaKnown RBP3.42□□□□□ -1.86
HMGB1P3-201ENST00000502802 ZBED9Q6R2W3 1325 aa3.42□□□□□ -1.86
HMGB1P3-201ENST00000502802 XIRP2A4UGR9 3374 aa3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 IGLV4-69A0A075B6H9 119 aa3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 IGKV1-27A0A075B6S5 117 aa3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 A0A1B0GW15 77 aa3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 MGAT4DA6NG13 374 aa3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 KRBOX1C9JBD0 128 aa3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 POLR3GO15318 223 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 B4GALT5O43286 388 aa3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 OR5AL1P0C617 328 aa3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 NEFHP12036 1026 aa3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 SPAM1P38567 509 aa3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 DNASE1L1P49184 302 aa3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 CDK5Q00535 292 aa3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 LOXL1Q08397 574 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 PNOCQ13519 176 aa3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 LRRC26Q2I0M4 334 aa3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 SMUG1Q53HV7 270 aa3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 MPV17L2Q567V2 206 aa3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 THOC7Q6I9Y2 204 aaKnown RBP3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 IGFL2Q6UWQ7 119 aa3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 NTM-AS1Q6ZSK4 140 aa3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 RIMKLAQ8IXN7 391 aa3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 CA13Q8N1Q1 262 aa3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 OR6N1Q8NGY5 312 aa3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 FLYWCH2Q96CP2 140 aaKnown RBP3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 CCDC124Q96CT7 223 aaKnown RBP3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 CPB2Q96IY4 423 aa3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 ZNF382Q96SR6 550 aa3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 OR52D1Q9H346 318 aa3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 C11orf49Q9H6J7 331 aa3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 RMND1Q9NWS8 449 aa3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 ZNRD1Q9P1U0 126 aa3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 CLEC2DQ9UHP7 191 aa3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 PSG11Q9UQ72 335 aa3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 ZNF318Q5VUA4 2279 aa3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 ZNF532Q9HCE3 1301 aa3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 BAZ2BQ9UIF8 2168 aaKnown RBP3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 C5orf42Q9H799 3197 aa3.41□□□□□ -1.86
HMGB1P3-201ENST00000502802 TET1Q8NFU7 2136 aa3.4□□□□□ -1.86
HMGB1P3-201ENST00000502802 SOCS1O15524 211 aa3.4□□□□□ -1.87
HMGB1P3-201ENST00000502802 CST4P01036 141 aa3.4□□□□□ -1.87
HMGB1P3-201ENST00000502802 TRBV12-3P01733 135 aa3.4□□□□□ -1.87
HMGB1P3-201ENST00000502802 CXCR1P25024 350 aa3.4□□□□□ -1.87
HMGB1P3-201ENST00000502802 PCK1P35558 622 aa3.4□□□□□ -1.87
HMGB1P3-201ENST00000502802 GALR1P47211 349 aa3.4□□□□□ -1.87
HMGB1P3-201ENST00000502802 NOVP48745 357 aa3.4□□□□□ -1.87
HMGB1P3-201ENST00000502802 MTPNP58546 118 aa3.4□□□□□ -1.87
HMGB1P3-201ENST00000502802 KRTAP10-6P60371 365 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P3-201ENST00000502802 IFITM3Q01628 133 aa3.4□□□□□ -1.87
HMGB1P3-201ENST00000502802 STX3Q13277 289 aa3.4□□□□□ -1.87
HMGB1P3-201ENST00000502802 XRCC4Q13426 336 aa3.4□□□□□ -1.87
HMGB1P3-201ENST00000502802 NAB1Q13506 487 aa3.4□□□□□ -1.87
HMGB1P3-201ENST00000502802 FAHD1Q6P587 224 aa3.4□□□□□ -1.87
HMGB1P3-201ENST00000502802 EPGNQ6UW88 154 aa3.4□□□□□ -1.87
HMGB1P3-201ENST00000502802 WDFY1Q8IWB7 410 aa3.4□□□□□ -1.87
HMGB1P3-201ENST00000502802 SLC7A5P1Q8MH63 180 aa3.4□□□□□ -1.87
HMGB1P3-201ENST00000502802 ING5Q8WYH8 240 aa3.4□□□□□ -1.87
HMGB1P3-201ENST00000502802 ZNF488Q96MN9 340 aa3.4□□□□□ -1.87
HMGB1P3-201ENST00000502802 FAM210AQ96ND0 272 aa3.4□□□□□ -1.87
HMGB1P3-201ENST00000502802 SFXN3Q9BWM7 321 aa3.4□□□□□ -1.87
HMGB1P3-201ENST00000502802 BOLA2Q9H3K6 86 aa3.4□□□□□ -1.87
HMGB1P3-201ENST00000502802 RBFOX1Q9NWB1 397 aaKnown RBP3.4□□□□□ -1.87
HMGB1P3-201ENST00000502802 SDHAF2Q9NX18 166 aa3.4□□□□□ -1.87
HMGB1P3-201ENST00000502802 VAX2Q9UIW0 290 aa3.4□□□□□ -1.87
HMGB1P3-201ENST00000502802 NDRG2Q9UN36 371 aaKnown RBP3.4□□□□□ -1.87
HMGB1P3-201ENST00000502802 ACOT9Q9Y305 439 aa3.4□□□□□ -1.87
HMGB1P3-201ENST00000502802 TMEM14AQ9Y6G1 99 aa3.4□□□□□ -1.87
HMGB1P3-201ENST00000502802 BDP1A6H8Y1 2624 aa3.4□□□□□ -1.87
HMGB1P3-201ENST00000502802 LRRC37A2A6NM11 1700 aa3.39□□□□□ -1.87
HMGB1P3-201ENST00000502802 PTPRSQ13332 1948 aa3.39□□□□□ -1.87
HMGB1P3-201ENST00000502802 TRAV8-4A0A0B4J246 113 aa3.39□□□□□ -1.87
HMGB1P3-201ENST00000502802 GOLGA8QA0A0J9YX86 632 aa3.39□□□□□ -1.87
HMGB1P3-201ENST00000502802 ERICH2A1L162 156 aa3.39□□□□□ -1.87
HMGB1P3-201ENST00000502802 ZNF705GA8MUZ8 300 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P3-201ENST00000502802 RSPH10B2B2RC85 870 aa3.39□□□□□ -1.87
HMGB1P3-201ENST00000502802 NDUFC2-KCTD14E9PQ53 114 aa3.39□□□□□ -1.87
HMGB1P3-201ENST00000502802 BPY2O14599 106 aa3.39□□□□□ -1.87
HMGB1P3-201ENST00000502802 MYL12BO14950 172 aa3.39□□□□□ -1.87
HMGB1P3-201ENST00000502802 PSPHP1O15172 72 aa3.39□□□□□ -1.87
HMGB1P3-201ENST00000502802 RAD51BO15315 384 aa3.39□□□□□ -1.87
HMGB1P3-201ENST00000502802 GLSO94925 669 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P3-201ENST00000502802 P01737 135 aa3.39□□□□□ -1.87
HMGB1P3-201ENST00000502802 APCSP02743 223 aa3.39□□□□□ -1.87
HMGB1P3-201ENST00000502802 RPN2P04844 631 aa3.39□□□□□ -1.87
HMGB1P3-201ENST00000502802 RSPH10BP0C881 870 aa3.39□□□□□ -1.87
HMGB1P3-201ENST00000502802 LIPCP11150 499 aa3.39□□□□□ -1.87
HMGB1P3-201ENST00000502802 CYBAP13498 195 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms