RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 IAPPP10997 89 aa11.74□□□□□ -0.53
GPC1-209ENST00000495100 IGFBP3P17936 291 aaPredicted RBP11.74□□□□□ -0.53
GPC1-209ENST00000495100 EIF1P41567 113 aaKnown RBP11.74□□□□□ -0.53
GPC1-209ENST00000495100 ALKBH6Q3KRA9 238 aa11.74□□□□□ -0.53
GPC1-209ENST00000495100 PIK3IP1Q96FE7 263 aa11.74□□□□□ -0.53
GPC1-209ENST00000495100 LYZL4Q96KX0 146 aa11.74□□□□□ -0.53
GPC1-209ENST00000495100 SH3BGRL3Q9H299 93 aa11.74□□□□□ -0.53
GPC1-209ENST00000495100 TMEM218A2RU14 115 aa11.74□□□□□ -0.53
GPC1-209ENST00000495100 PET100P0DJ07 73 aa11.74□□□□□ -0.53
GPC1-209ENST00000495100 MUC1P15941 1255 aaPredicted RBP11.74□□□□□ -0.53
GPC1-209ENST00000495100 ECH1Q13011 328 aa11.74□□□□□ -0.53
GPC1-209ENST00000495100 EIF5AL1Q6IS14 154 aaKnown RBP11.74□□□□□ -0.53
GPC1-209ENST00000495100 OR6X1Q8NH79 312 aa11.74□□□□□ -0.53
GPC1-209ENST00000495100 C2orf50Q96LR7 162 aa11.74□□□□□ -0.53
GPC1-209ENST00000495100 ARRDC1-AS1Q9H2J1 176 aa11.74□□□□□ -0.53
GPC1-209ENST00000495100 ZFHX4Q86UP3 3567 aa11.74□□□□□ -0.53
GPC1-209ENST00000495100 LPAR6P43657 344 aa11.74□□□□□ -0.53
GPC1-209ENST00000495100 RUNX1Q01196 453 aa11.74□□□□□ -0.53
GPC1-209ENST00000495100 ZNF674Q2M3X9 581 aa11.74□□□□□ -0.53
GPC1-209ENST00000495100 C4orf17Q53FE4 359 aa11.74□□□□□ -0.53
GPC1-209ENST00000495100 C1orf100Q5SVJ3 147 aa11.74□□□□□ -0.53
GPC1-209ENST00000495100 C5orf46Q6UWT4 87 aa11.74□□□□□ -0.53
GPC1-209ENST00000495100 DHRS13Q6UX07 377 aa11.74□□□□□ -0.53
GPC1-209ENST00000495100 NFAM1Q8NET5 270 aaPredicted RBP11.74□□□□□ -0.53
GPC1-209ENST00000495100 RPS4Y2Q8TD47 263 aa11.74□□□□□ -0.53
GPC1-209ENST00000495100 ERGIC1Q969X5 290 aa11.74□□□□□ -0.53
GPC1-209ENST00000495100 PIGMQ9H3S5 423 aa11.74□□□□□ -0.53
GPC1-209ENST00000495100 SIRPB1O00241 398 aa11.73□□□□□ -0.53
GPC1-209ENST00000495100 S100A9P06702 114 aaKnown RBP11.73□□□□□ -0.53
GPC1-209ENST00000495100 ARF1P84077 181 aaKnown RBP11.73□□□□□ -0.53
GPC1-209ENST00000495100 VHLLQ6RSH7 139 aa11.73□□□□□ -0.53
GPC1-209ENST00000495100 LDLRAD3Q86YD5 345 aa11.73□□□□□ -0.53
GPC1-209ENST00000495100 ZNF808Q8N4W9 903 aaPredicted RBP11.73□□□□□ -0.53
GPC1-209ENST00000495100 TMEM105Q8N8V8 129 aa11.73□□□□□ -0.53
GPC1-209ENST00000495100 ZNF285Q96NJ3 590 aa11.73□□□□□ -0.53
GPC1-209ENST00000495100 NGFP01138 241 aa11.73□□□□□ -0.53
GPC1-209ENST00000495100 CD1AP06126 327 aa11.73□□□□□ -0.53
GPC1-209ENST00000495100 SNRPEP62304 92 aaKnown RBP11.73□□□□□ -0.53
GPC1-209ENST00000495100 ARG2P78540 354 aa11.73□□□□□ -0.53
GPC1-209ENST00000495100 OR2T2Q6IF00 324 aa11.73□□□□□ -0.53
GPC1-209ENST00000495100 WDR74Q6RFH5 385 aaPredicted RBP11.73□□□□□ -0.53
GPC1-209ENST00000495100 TUSC5Q8IXB3 177 aa11.73□□□□□ -0.53
GPC1-209ENST00000495100 OR1F12Q8NHA8 337 aa11.73□□□□□ -0.53
GPC1-209ENST00000495100 SFT2D1Q8WV19 159 aa11.73□□□□□ -0.53
GPC1-209ENST00000495100 TMEM230Q96A57 120 aa11.73□□□□□ -0.53
GPC1-209ENST00000495100 MRGPRFQ96AM1 343 aa11.73□□□□□ -0.53
GPC1-209ENST00000495100 UQCC2Q9BRT2 126 aa11.73□□□□□ -0.53
GPC1-209ENST00000495100 RAB33BQ9H082 229 aa11.73□□□□□ -0.53
GPC1-209ENST00000495100 PURGQ9UJV8 347 aaKnown RBP11.73□□□□□ -0.53
GPC1-209ENST00000495100 hCG_1809904A0A1W2PP81 198 aa11.73□□□□□ -0.53
GPC1-209ENST00000495100 A0A1W2PR64 198 aa11.73□□□□□ -0.53
GPC1-209ENST00000495100 A0A1W2PRV1 198 aa11.73□□□□□ -0.53
GPC1-209ENST00000495100 AQP7P3A6NL99 342 aa11.73□□□□□ -0.53
GPC1-209ENST00000495100 TFF1P04155 84 aa11.73□□□□□ -0.53
GPC1-209ENST00000495100 MDKP21741 143 aaPredicted RBP11.73□□□□□ -0.53
GPC1-209ENST00000495100 SUCLG1P53597 346 aaKnown RBP11.73□□□□□ -0.53
GPC1-209ENST00000495100 SHEQ5VZ18 495 aa11.73□□□□□ -0.53
GPC1-209ENST00000495100 RAB11FIP2Q7L804 512 aa11.73□□□□□ -0.53
GPC1-209ENST00000495100 SLC16A13Q7RTY0 426 aa11.73□□□□□ -0.53
GPC1-209ENST00000495100 CLRN3Q8NCR9 226 aa11.73□□□□□ -0.53
GPC1-209ENST00000495100 OR52M1Q8NGK5 317 aa11.73□□□□□ -0.53
GPC1-209ENST00000495100 OR14K1Q8NGZ2 314 aa11.73□□□□□ -0.53
GPC1-209ENST00000495100 RBMXL1Q96E39 390 aaKnown RBP11.73□□□□□ -0.53
GPC1-209ENST00000495100 CHCHD2Q9Y6H1 151 aaPredicted RBP11.73□□□□□ -0.53
GPC1-209ENST00000495100 ZFP92A6NM28 416 aa11.72□□□□□ -0.53
GPC1-209ENST00000495100 FBP1P09467 338 aa11.72□□□□□ -0.53
GPC1-209ENST00000495100 RPS10P46783 165 aaKnown RBP11.72□□□□□ -0.53
GPC1-209ENST00000495100 IDH3GP51553 393 aaPredicted RBP11.72□□□□□ -0.53
GPC1-209ENST00000495100 PLP2Q04941 152 aa11.72□□□□□ -0.53
GPC1-209ENST00000495100 ACER2Q5QJU3 275 aa11.72□□□□□ -0.53
GPC1-209ENST00000495100 FAM24BQ8N5W8 94 aa11.72□□□□□ -0.53
GPC1-209ENST00000495100 GLYATL2Q8WU03 294 aa11.72□□□□□ -0.53
GPC1-209ENST00000495100 C12orf10Q9HB07 376 aa11.72□□□□□ -0.53
GPC1-209ENST00000495100 KCNJ16Q9NPI9 418 aa11.72□□□□□ -0.53
GPC1-209ENST00000495100 SLC17A5Q9NRA2 495 aa11.72□□□□□ -0.53
GPC1-209ENST00000495100 GPR132Q9UNW8 380 aa11.72□□□□□ -0.53
GPC1-209ENST00000495100 HDGFL3Q9Y3E1 203 aa11.72□□□□□ -0.53
GPC1-209ENST00000495100 BORCS7-ASMTA0A0B4J1R7 106 aa11.72□□□□□ -0.53
GPC1-209ENST00000495100 RNASEK-C17orf49H0YIS7 233 aa11.72□□□□□ -0.53
GPC1-209ENST00000495100 TUSC2O75896 110 aa11.72□□□□□ -0.53
GPC1-209ENST00000495100 FGF2P09038 288 aa11.72□□□□□ -0.53
GPC1-209ENST00000495100 GSTP1P09211 210 aaKnown RBP11.72□□□□□ -0.53
GPC1-209ENST00000495100 ELLP55199 621 aaPredicted RBP11.72□□□□□ -0.53
GPC1-209ENST00000495100 DEGS2Q6QHC5 323 aa11.72□□□□□ -0.53
GPC1-209ENST00000495100 LCN15Q6UWW0 184 aa11.72□□□□□ -0.53
GPC1-209ENST00000495100 HOGA1Q86XE5 327 aa11.72□□□□□ -0.53
GPC1-209ENST00000495100 RNF126Q9BV68 326 aa11.72□□□□□ -0.53
GPC1-209ENST00000495100 ZNF286AQ9HBT8 521 aa11.72□□□□□ -0.53
GPC1-209ENST00000495100 TMEM14DPA8MWL7 114 aa11.72□□□□□ -0.53
GPC1-209ENST00000495100 ZNF732B4DXR9 585 aa11.72□□□□□ -0.53
GPC1-209ENST00000495100 SYNGR4O95473 234 aa11.72□□□□□ -0.53
GPC1-209ENST00000495100 DCAF12Q5T6F0 453 aa11.72□□□□□ -0.53
GPC1-209ENST00000495100 OR8G2PQ6IF36 304 aa11.72□□□□□ -0.53
GPC1-209ENST00000495100 ZNF529Q6P280 563 aa11.72□□□□□ -0.53
GPC1-209ENST00000495100 CALHM1Q8IU99 346 aa11.72□□□□□ -0.53
GPC1-209ENST00000495100 DTWD2Q8NBA8 298 aa11.72□□□□□ -0.53
GPC1-209ENST00000495100 OR1K1Q8NGR3 316 aa11.72□□□□□ -0.53
GPC1-209ENST00000495100 RFESDQ8TAC1 157 aa11.72□□□□□ -0.53
GPC1-209ENST00000495100 MARS2Q96GW9 593 aaKnown RBP11.72□□□□□ -0.53
GPC1-209ENST00000495100 PRRX2Q99811 253 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms