RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 TNXAQ16473 311 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 CDC37Q16543 378 aaPredicted RBP-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 HADHQ16836 314 aaKnown RBP-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 RPEL1Q2QD12 228 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 MAJINQ3KP22 176 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 HSDL1Q3SXM5 330 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 ACSBG2Q5FVE4 666 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 TIMM23BQ5SRD1 257 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 C10orf91Q5T1B1 145 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 MLIPQ5VWP3 458 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 CENPPQ6IPU0 288 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 LAIR2Q6ISS4 152 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 EPGNQ6UW88 154 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 WDR82Q6UXN9 313 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 FAM231DQ6ZW35 169 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 LYZL2Q7Z4W2 148 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 VTCN1Q7Z7D3 282 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 DPPA2Q7Z7J5 298 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 LINC00596Q86U02 117 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 FAM228AQ86W67 206 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 CYP4Z2PQ8N1L4 340 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 SLC25A45Q8N413 288 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 ZIC4Q8N9L1 334 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 TTC29Q8NA56 475 aaPredicted RBP-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 C15orf53Q8NAA6 179 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 FAM184AQ8NB25 1140 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 ZNF738Q8NE65 137 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 OR4K2Q8NGD2 314 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 OR10P1Q8NGE3 313 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 TCP10LQ8TDR4 215 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 BAALCQ8WXS3 180 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 NRGNQ92686 78 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 TMIGD2Q96BF3 282 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 TBC1D31Q96DN5 1066 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 MRPL48Q96GC5 212 aaKnown RBP-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 SMARCD1Q96GM5 515 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 ZNF514Q96K75 400 aaPredicted RBP-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 SMIM8Q96KF7 97 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 OR2A7Q96R45 310 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 ZBTB18Q99592 522 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 AGMATQ9BSE5 352 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 TIMM21Q9BVV7 248 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 ZYG11BQ9C0D3 744 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 C16orf95Q9H693 158 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 REEP1Q9H902 201 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 TAC3Q9UHF0 121 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 CYB5R1Q9UHQ9 305 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 BLOC1S6Q9UL45 172 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 KLK5Q9Y337 293 aaPredicted RBP-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 MRPS16Q9Y3D3 137 aaKnown RBP-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 LINC00588Q9Y4M8 146 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 ARHGAP32A7KAX9 2087 aa-0.09□□□□□ -2.42
SNHG3-203ENST00000447507 MROH5Q6ZUA9 1318 aa-0.1□□□□□ -2.42
SNHG3-203ENST00000447507 CEP170Q5SW79 1584 aa-0.1□□□□□ -2.42
SNHG3-203ENST00000447507 PLCH2O75038 1416 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 MIA3Q5JRA6 1907 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 IGLV3-9A0A075B6K5 115 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 A0A075B6Q4 140 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 LOC389332A0A1B0GUA5 103 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 FAM240BA0A1B0GVZ2 78 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 HEATR9A2RTY3 570 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 GMNCA6NCL1 334 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 ARRDC5A6NEK1 342 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 OR5H14A6NHG9 310 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 MYL12BO14950 172 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 EEF1E1O43324 174 aaKnown RBP-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 SH2D1AO60880 128 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 FCN3O75636 299 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 SMC2O95347 1197 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 PLEKHA8P1O95397 391 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 SOD1P00441 154 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 PDYNP01213 254 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 FTH1P02794 183 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 PRH1P02810 166 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 IFNW1P05000 195 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 ERCC1P07992 297 aaPredicted RBP-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 KRT16P08779 473 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 ALOX5APP20292 161 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 RRM2P31350 389 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 TNNT2P45379 298 aaPredicted RBP-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 NUDT2P50583 147 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 XKP51811 444 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 OR2B6P58173 313 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 MTPNP58546 118 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 ATP6V0D1P61421 351 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 SLC35A1P78382 337 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 HTR4Q13639 388 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 TFDP2Q14188 446 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 PPP1R7Q15435 360 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 ZNF791Q3KP31 576 aaPredicted RBP-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 TTC23LQ6PF05 361 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 ZNF773Q6PK81 442 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 TMEM220Q6QAJ8 160 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 CASC1Q6TDU7 716 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 SPESP1Q6UW49 350 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 RGS9BPQ6ZS82 235 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 C2orf91Q6ZV80 131 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 RUFY3Q7L099 469 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 SLC7A5P1Q8MH63 180 aa-0.1□□□□□ -2.43
SNHG3-203ENST00000447507 BBS5Q8N3I7 341 aa-0.1□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms