RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 IAH1Q2TAA2 248 aaPredicted RBP14.57□□□□□ -0.08
NUP50-203ENST00000407019 UQCC3Q6UW78 93 aa14.57□□□□□ -0.08
NUP50-203ENST00000407019 FAM219AQ8IW50 185 aa14.57□□□□□ -0.08
NUP50-203ENST00000407019 RNF141Q8WVD5 230 aa14.57□□□□□ -0.08
NUP50-203ENST00000407019 SLC5A7Q9GZV3 580 aa14.57□□□□□ -0.08
NUP50-203ENST00000407019 LIME1Q9H400 295 aa14.57□□□□□ -0.08
NUP50-203ENST00000407019 TMEM100Q9NV29 134 aa14.57□□□□□ -0.08
NUP50-203ENST00000407019 PARPBPQ9NWS1 579 aa14.57□□□□□ -0.08
NUP50-203ENST00000407019 RTTNQ86VV8 2226 aa14.57□□□□□ -0.08
NUP50-203ENST00000407019 RAB19A4D1S5 217 aa14.56□□□□□ -0.08
NUP50-203ENST00000407019 C21orf140B9A014 251 aa14.56□□□□□ -0.08
NUP50-203ENST00000407019 TSPAN4O14817 238 aa14.56□□□□□ -0.08
NUP50-203ENST00000407019 PDCD6O75340 191 aa14.56□□□□□ -0.08
NUP50-203ENST00000407019 SYNGR4O95473 234 aa14.56□□□□□ -0.08
NUP50-203ENST00000407019 IFNA21P01568 189 aa14.56□□□□□ -0.08
NUP50-203ENST00000407019 ZNF728P0DKX0 622 aa14.56□□□□□ -0.08
NUP50-203ENST00000407019 RBM11P57052 281 aaKnown RBP14.56□□□□□ -0.08
NUP50-203ENST00000407019 MALLQ13021 153 aa14.56□□□□□ -0.08
NUP50-203ENST00000407019 STK11Q15831 433 aa14.56□□□□□ -0.08
NUP50-203ENST00000407019 CDCP2Q5VXM1 449 aa14.56□□□□□ -0.08
NUP50-203ENST00000407019 BRICD5Q6PL45 260 aa14.56□□□□□ -0.08
NUP50-203ENST00000407019 SLC22A25Q6T423 547 aa14.56□□□□□ -0.08
NUP50-203ENST00000407019 COLCA1Q6ZS62 124 aa14.56□□□□□ -0.08
NUP50-203ENST00000407019 SPERTQ8NA61 448 aa14.56□□□□□ -0.08
NUP50-203ENST00000407019 TMED6Q8WW62 240 aa14.56□□□□□ -0.08
NUP50-203ENST00000407019 TOMM40LQ969M1 308 aa14.56□□□□□ -0.08
NUP50-203ENST00000407019 HES7Q9BYE0 225 aa14.56□□□□□ -0.08
NUP50-203ENST00000407019 FRYLO94915 3013 aa14.56□□□□□ -0.08
NUP50-203ENST00000407019 PIGPP57054 158 aa14.56□□□□□ -0.08
NUP50-203ENST00000407019 OR1C1Q15619 314 aa14.56□□□□□ -0.08
NUP50-203ENST00000407019 TMEM164Q5U3C3 297 aa14.56□□□□□ -0.08
NUP50-203ENST00000407019 BOLLQ8N9W6 283 aaKnown RBP14.56□□□□□ -0.08
NUP50-203ENST00000407019 CNTNAP3BQ96NU0 1288 aa14.56□□□□□ -0.08
NUP50-203ENST00000407019 CNTNAP3Q9BZ76 1288 aa14.56□□□□□ -0.08
NUP50-203ENST00000407019 ZNF286AQ9HBT8 521 aa14.56□□□□□ -0.08
NUP50-203ENST00000407019 A0A1W2PNU3 283 aaPredicted RBP14.55□□□□□ -0.08
NUP50-203ENST00000407019 FAM166BA8MTA8 275 aa14.55□□□□□ -0.08
NUP50-203ENST00000407019 ZNF708P17019 499 aa14.55□□□□□ -0.08
NUP50-203ENST00000407019 ITGA3P26006 1051 aa14.55□□□□□ -0.08
NUP50-203ENST00000407019 ABCA11PQ4W5N1 156 aa14.55□□□□□ -0.08
NUP50-203ENST00000407019 C9orf135Q5VTT2 229 aa14.55□□□□□ -0.08
NUP50-203ENST00000407019 FOXRED2Q8IWF2 684 aa14.55□□□□□ -0.08
NUP50-203ENST00000407019 TUSC5Q8IXB3 177 aa14.55□□□□□ -0.08
NUP50-203ENST00000407019 ZNF611Q8N823 705 aa14.55□□□□□ -0.08
NUP50-203ENST00000407019 MARS2Q96GW9 593 aaKnown RBP14.55□□□□□ -0.08
NUP50-203ENST00000407019 NARS2Q96I59 477 aaKnown RBP14.55□□□□□ -0.08
NUP50-203ENST00000407019 TTTY12Q9BZ98 90 aa14.55□□□□□ -0.08
NUP50-203ENST00000407019 SLC6A15Q9H2J7 730 aa14.55□□□□□ -0.08
NUP50-203ENST00000407019 CALHM2Q9HA72 323 aa14.55□□□□□ -0.08
NUP50-203ENST00000407019 KCNIP3Q9Y2W7 256 aa14.55□□□□□ -0.08
NUP50-203ENST00000407019 FAM221AA4D161 298 aa14.54□□□□□ -0.08
NUP50-203ENST00000407019 RPL36A-HNRNPH2H7BZ11 118 aa14.54□□□□□ -0.08
NUP50-203ENST00000407019 CD79AP11912 226 aa14.54□□□□□ -0.08
NUP50-203ENST00000407019 MAGEA5P43359 124 aa14.54□□□□□ -0.08
NUP50-203ENST00000407019 DCAF10Q5QP82 559 aa14.54□□□□□ -0.08
NUP50-203ENST00000407019 GGNBP1Q5YKI7 109 aa14.54□□□□□ -0.08
NUP50-203ENST00000407019 CALHM1Q8IU99 346 aa14.54□□□□□ -0.08
NUP50-203ENST00000407019 LHFPL5Q8TAF8 219 aa14.54□□□□□ -0.08
NUP50-203ENST00000407019 MRPL24Q96A35 216 aaKnown RBP14.54□□□□□ -0.08
NUP50-203ENST00000407019 NAA60Q9H7X0 242 aa14.54□□□□□ -0.08
NUP50-203ENST00000407019 C12orf4Q9NQ89 552 aa14.54□□□□□ -0.08
NUP50-203ENST00000407019 TUBD1Q9UJT1 453 aa14.54□□□□□ -0.08
NUP50-203ENST00000407019 A0A096LPE4 126 aa14.54□□□□□ -0.08
NUP50-203ENST00000407019 A0A1W2PPZ6 126 aa14.54□□□□□ -0.08
NUP50-203ENST00000407019 TAAR5O14804 337 aa14.54□□□□□ -0.08
NUP50-203ENST00000407019 SP9P0CG40 484 aa14.54□□□□□ -0.08
NUP50-203ENST00000407019 HKR1P10072 659 aa14.54□□□□□ -0.08
NUP50-203ENST00000407019 FXYD4P59646 89 aa14.54□□□□□ -0.08
NUP50-203ENST00000407019 EIF5AP63241 154 aaKnown RBP14.54□□□□□ -0.08
NUP50-203ENST00000407019 ZNF273Q14593 569 aa14.54□□□□□ -0.08
NUP50-203ENST00000407019 SMCO1Q147U7 214 aa14.54□□□□□ -0.08
NUP50-203ENST00000407019 SLC25A26Q70HW3 274 aa14.54□□□□□ -0.08
NUP50-203ENST00000407019 OR56B2PQ8NGI1 322 aa14.54□□□□□ -0.08
NUP50-203ENST00000407019 ARL11Q969Q4 196 aa14.54□□□□□ -0.08
NUP50-203ENST00000407019 LRRC46Q96FV0 321 aa14.54□□□□□ -0.08
NUP50-203ENST00000407019 PAPOLGQ9BWT3 736 aaKnown RBP14.54□□□□□ -0.08
NUP50-203ENST00000407019 OR2S2Q9NQN1 319 aa14.54□□□□□ -0.08
NUP50-203ENST00000407019 ZC4H2Q9NQZ6 224 aa14.54□□□□□ -0.08
NUP50-203ENST00000407019 TECTAO75443 2155 aa14.54□□□□□ -0.08
NUP50-203ENST00000407019 SIGLEC5O15389 551 aa14.53□□□□□ -0.08
NUP50-203ENST00000407019 ZNF205O95201 554 aa14.53□□□□□ -0.08
NUP50-203ENST00000407019 FUT3P21217 361 aa14.53□□□□□ -0.08
NUP50-203ENST00000407019 CCNOP22674 350 aa14.53□□□□□ -0.08
NUP50-203ENST00000407019 FCGR2CP31995 323 aa14.53□□□□□ -0.08
NUP50-203ENST00000407019 PMELP40967 661 aa14.53□□□□□ -0.08
NUP50-203ENST00000407019 DEFA5Q01523 94 aa14.53□□□□□ -0.08
NUP50-203ENST00000407019 PDCD1Q15116 288 aa14.53□□□□□ -0.08
NUP50-203ENST00000407019 ATRAIDQ6UW56 229 aa14.53□□□□□ -0.08
NUP50-203ENST00000407019 RTN4IP1Q8WWV3 396 aaPredicted RBP14.53□□□□□ -0.08
NUP50-203ENST00000407019 POM121Q96HA1 1249 aa14.53□□□□□ -0.08
NUP50-203ENST00000407019 ZNF442Q9H7R0 627 aa14.53□□□□□ -0.08
NUP50-203ENST00000407019 PLA2G3Q9NZ20 509 aa14.53□□□□□ -0.08
NUP50-203ENST00000407019 DEDDO75618 318 aa14.53□□□□□ -0.08
NUP50-203ENST00000407019 OR7C1O76099 320 aaPredicted RBP14.53□□□□□ -0.08
NUP50-203ENST00000407019 HLA-HP01893 362 aa14.53□□□□□ -0.08
NUP50-203ENST00000407019 COX5BP10606 129 aa14.53□□□□□ -0.08
NUP50-203ENST00000407019 CD59P13987 128 aa14.53□□□□□ -0.08
NUP50-203ENST00000407019 ATF4P18848 351 aaPredicted RBP14.53□□□□□ -0.08
NUP50-203ENST00000407019 GLP1RP43220 463 aa14.53□□□□□ -0.08
NUP50-203ENST00000407019 PLGLB1Q02325 96 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms