RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 CARFQ8N187 725 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 OR52L2PQ8NGH6 319 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 RAB37Q96AX2 223 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 HSPB9Q9BQS6 159 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 PLCE1Q9P212 2302 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 WDR81Q562E7 1941 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 COL22A1Q8NFW1 1626 aaPredicted RBP7.82□□□□□ -1.16
CSMD1-216ENST00000602557 RGPD4Q7Z3J3 1758 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 CD96P40200 585 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 CHAC2Q8WUX2 184 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 IGLV3-10A0A075B6K4 115 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 NRASP01111 189 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 CNN1P51911 297 aaKnown RBP7.82□□□□□ -1.16
CSMD1-216ENST00000602557 STPG2Q8N412 459 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 RTL8AQ9BWD3 113 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 CHRM2P08172 466 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 SOD3P08294 240 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 CDK5R1Q15078 307 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 FCRL6Q6DN72 434 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 ADAMTSL1Q8N6G6 1762 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 OR10G3Q8NGC4 313 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 MS4A6EQ96DS6 147 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 WDFY2Q96P53 400 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 TRIB1Q96RU8 372 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 CHST6Q9GZX3 395 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 LAMB2P55268 1798 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 RBBP6Q7Z6E9 1792 aaKnown RBP7.82□□□□□ -1.16
CSMD1-216ENST00000602557 TRPM3Q9HCF6 1732 aaPredicted RBP7.82□□□□□ -1.16
CSMD1-216ENST00000602557 SH2D1BO14796 132 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 WDR1O75083 606 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 TMEM178AQ8NBL3 297 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 SLC25A43Q8WUT9 341 aaPredicted RBP7.82□□□□□ -1.16
CSMD1-216ENST00000602557 PRKNO60260 465 aaPredicted RBP7.82□□□□□ -1.16
CSMD1-216ENST00000602557 GLB1P16278 677 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 TCN2P20062 427 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 IER3P46695 156 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 M1APQ8TC57 530 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 KIR3DX1Q9H7L2 352 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 H3BQ15 152 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 CYB5R3P00387 301 aaPredicted RBP7.82□□□□□ -1.16
CSMD1-216ENST00000602557 LIMS3P0CW19 117 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 LIMS4P0CW20 117 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 RAB32Q13637 225 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 LAIR1Q6GTX8 287 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 ABI3BPQ7Z7G0 1075 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 OR4C12Q96R67 309 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 EN2P19622 333 aaPredicted RBP7.82□□□□□ -1.16
CSMD1-216ENST00000602557 RIPPLY3P57055 190 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 EXT1Q16394 746 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 AGBL4Q5VU57 503 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 SRD5A3Q9H8P0 318 aa7.82□□□□□ -1.16
CSMD1-216ENST00000602557 ELF5Q9UKW6 265 aaPredicted RBP7.82□□□□□ -1.16
CSMD1-216ENST00000602557 METTL12A8MUP2 240 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 TOX3O15405 576 aaPredicted RBP7.81□□□□□ -1.16
CSMD1-216ENST00000602557 ADH4P08319 380 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 TMPRSS11FQ6ZWK6 438 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 C16orf82Q7Z2V1 217 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 C19orf53Q9UNZ5 99 aaPredicted RBP7.81□□□□□ -1.16
CSMD1-216ENST00000602557 SLC17A4Q9Y2C5 497 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 FBP1P09467 338 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 B4GALT1P15291 398 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 PHOSPHO2Q8TCD6 241 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 TMEM174Q8WUU8 243 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 THAP10Q9P2Z0 257 aaPredicted RBP7.81□□□□□ -1.16
CSMD1-216ENST00000602557 C9orf170A2RU37 121 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 FGF17O60258 216 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 PTCRAQ6ISU1 281 aaPredicted RBP7.81□□□□□ -1.16
CSMD1-216ENST00000602557 OR5C1Q8NGR4 320 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 EDAQ92838 391 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 MRPS24Q96EL2 167 aaKnown RBP7.81□□□□□ -1.16
CSMD1-216ENST00000602557 PRRX2Q99811 253 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 TMEFF2Q9UIK5 374 aaPredicted RBP7.81□□□□□ -1.16
CSMD1-216ENST00000602557 MUC1P15941 1255 aaPredicted RBP7.81□□□□□ -1.16
CSMD1-216ENST00000602557 EMDP50402 254 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 BCL2L2Q92843 193 aaPredicted RBP7.81□□□□□ -1.16
CSMD1-216ENST00000602557 ZBP1Q9H171 429 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 C4orf47A7E2U8 309 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 FXYD1O00168 92 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 RCC1P18754 421 aaPredicted RBP7.81□□□□□ -1.16
CSMD1-216ENST00000602557 HTR1DP28221 377 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 SLC6A1P30531 599 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 NOVP48745 357 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 CEBPDP49716 269 aaPredicted RBP7.81□□□□□ -1.16
CSMD1-216ENST00000602557 OR52N4Q8NGI2 321 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 LRFN3Q9BTN0 628 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 VN1R1Q9GZP7 353 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 ASIC5Q9NY37 505 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 V9GYH0 126 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 NHSQ6T4R5 1651 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 B4DEV8 164 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 PTP4A3O75365 173 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 OTX1P32242 354 aaPredicted RBP7.81□□□□□ -1.16
CSMD1-216ENST00000602557 C8orf44Q96CB5 159 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 C20orf141Q9NUB4 165 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 PTPRFP10586 1907 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 NDUFS8O00217 210 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 ANKRD34CP0C6C1 535 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 CST5P28325 142 aaPredicted RBP7.81□□□□□ -1.16
CSMD1-216ENST00000602557 TPBGQ13641 420 aa7.81□□□□□ -1.16
CSMD1-216ENST00000602557 MRPL54Q6P161 138 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms