RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 KBTBD11-OT1A0A1B0GTJ5 212 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 ANKUB1A6NFN9 424 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 F5H768 121 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 G3V3Q6 166 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 K7ENP7 123 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 NBR2O15453 112 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 PLA2G10O15496 165 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 ERI3O43414 337 aaKnown RBP6.61□□□□□ -1.35
HDAC3-216ENST00000523088 SYT7O43581 403 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 NDUFB8O95169 186 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 VENTXO95231 258 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 IL2RAP01589 272 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 SERPINE1P05121 402 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 FGF1P05230 155 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 CELA2BP08218 269 aaPredicted RBP6.61□□□□□ -1.35
HDAC3-216ENST00000523088 TMEM225BP0DP42 221 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 PSG2P11465 335 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 ZNF19P17023 458 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 ALOX5APP20292 161 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 FPR2P25090 351 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 FASP25445 335 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 HTR1FP30939 366 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 RPL21P46778 160 aaKnown RBP6.61□□□□□ -1.35
HDAC3-216ENST00000523088 NPBWR1P48145 328 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 SPINT3P49223 89 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 ARL4DP49703 201 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 NDUFA6P56556 154 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 RIPPLY3P57055 190 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 CDK5Q00535 292 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 ST3GAL3Q11203 375 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 IAH1Q2TAA2 248 aaPredicted RBP6.61□□□□□ -1.35
HDAC3-216ENST00000523088 C3orf36Q3SXR2 165 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 TTLL9Q3SXZ7 439 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 MSS51Q4VC12 460 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 SPIN4Q56A73 249 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 COA6Q5JTJ3 125 aaKnown RBP6.61□□□□□ -1.35
HDAC3-216ENST00000523088 DCAF12L2Q5VW00 463 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 FAAP20Q6NZ36 180 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 NIPAL3Q6P499 406 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 DHRS11Q6UWP2 260 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 LAPTM4BQ86VI4 370 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 TP53INP2Q8IXH6 220 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 C9orf40Q8IXQ3 194 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 ARIH2OSQ8N7S6 290 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 OR6N2Q8NGY6 317 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 OR5B3Q8NH48 314 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 C16orf52Q8NHV5 167 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 VN1R17PQ8TDU5 208 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 WDR89Q96FK6 387 aaPredicted RBP6.61□□□□□ -1.35
HDAC3-216ENST00000523088 IMP4Q96G21 291 aaKnown RBP6.61□□□□□ -1.35
HDAC3-216ENST00000523088 MRPL57Q9BQC6 102 aaKnown RBP6.61□□□□□ -1.35
HDAC3-216ENST00000523088 ZNF649Q9BS31 505 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 MS4A5Q9H3V2 200 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 UBTD1Q9HAC8 227 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 SLC25A19Q9HC21 320 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 EXOSC4Q9NPD3 245 aaKnown RBP6.61□□□□□ -1.35
HDAC3-216ENST00000523088 ASB6Q9NWX5 421 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 CLN8Q9UBY8 286 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 HSPB8Q9UJY1 196 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 ERG28Q9UKR5 140 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 MCTS1Q9ULC4 181 aaKnown RBP6.61□□□□□ -1.35
HDAC3-216ENST00000523088 PLAGL1Q9UM63 463 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 FOXJ3Q9UPW0 622 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 LOXL2Q9Y4K0 774 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 TIMM10BQ9Y5J6 103 aa6.61□□□□□ -1.35
HDAC3-216ENST00000523088 BORCS7-ASMTA0A0B4J1R7 106 aa6.6□□□□□ -1.35
HDAC3-216ENST00000523088 PRSS37A4D1T9 235 aa6.6□□□□□ -1.35
HDAC3-216ENST00000523088 FRG2CA6NGY1 282 aa6.6□□□□□ -1.35
HDAC3-216ENST00000523088 FAM90A20PA6NIJ5 464 aa6.6□□□□□ -1.35
HDAC3-216ENST00000523088 OR5B21A6NL26 309 aa6.6□□□□□ -1.35
HDAC3-216ENST00000523088 FTCDNL1E5RQL4 147 aa6.6□□□□□ -1.35
HDAC3-216ENST00000523088 RNASET2O00584 256 aaKnown RBP6.6□□□□□ -1.35
HDAC3-216ENST00000523088 TNFSF13O75888 250 aa6.6□□□□□ -1.35
HDAC3-216ENST00000523088 SOD1P00441 154 aa6.6□□□□□ -1.35
HDAC3-216ENST00000523088 PSG1P11464 419 aa6.6□□□□□ -1.35
HDAC3-216ENST00000523088 NME2P22392 152 aa6.6□□□□□ -1.35
HDAC3-216ENST00000523088 HTR1EP28566 365 aa6.6□□□□□ -1.35
HDAC3-216ENST00000523088 OR10J1P30954 320 aa6.6□□□□□ -1.35
HDAC3-216ENST00000523088 RPL29P47914 159 aaKnown RBP6.6□□□□□ -1.35
HDAC3-216ENST00000523088 FOXG1P55316 489 aaPredicted RBP6.6□□□□□ -1.35
HDAC3-216ENST00000523088 RPS13P62277 151 aaKnown RBP6.6□□□□□ -1.35
HDAC3-216ENST00000523088 PPIAP62937 165 aaKnown RBP6.6□□□□□ -1.35
HDAC3-216ENST00000523088 PRDX4Q13162 271 aa6.6□□□□□ -1.35
HDAC3-216ENST00000523088 MFAP5Q13361 173 aa6.6□□□□□ -1.35
HDAC3-216ENST00000523088 TMEM255AQ5JRV8 349 aa6.6□□□□□ -1.35
HDAC3-216ENST00000523088 TMEM78Q5T7P6 136 aa6.6□□□□□ -1.35
HDAC3-216ENST00000523088 ZNF705AQ6ZN79 300 aaPredicted RBP6.6□□□□□ -1.35
HDAC3-216ENST00000523088 LCNL1Q6ZST4 164 aa6.6□□□□□ -1.35
HDAC3-216ENST00000523088 PRICKLE2Q7Z3G6 844 aa6.6□□□□□ -1.35
HDAC3-216ENST00000523088 INO80EQ8NBZ0 244 aaPredicted RBP6.6□□□□□ -1.35
HDAC3-216ENST00000523088 NPEPL1Q8NDH3 523 aa6.6□□□□□ -1.35
HDAC3-216ENST00000523088 SDR9C7Q8NEX9 313 aa6.6□□□□□ -1.35
HDAC3-216ENST00000523088 HAVCR2Q8TDQ0 301 aa6.6□□□□□ -1.35
HDAC3-216ENST00000523088 NUDT8Q8WV74 236 aa6.6□□□□□ -1.35
HDAC3-216ENST00000523088 RNF141Q8WVD5 230 aa6.6□□□□□ -1.35
HDAC3-216ENST00000523088 ASB10Q8WXI3 467 aa6.6□□□□□ -1.35
HDAC3-216ENST00000523088 IL22RA2Q969J5 263 aa6.6□□□□□ -1.35
HDAC3-216ENST00000523088 MRGPRX2Q96LB1 330 aa6.6□□□□□ -1.35
HDAC3-216ENST00000523088 RCHY1Q96PM5 261 aa6.6□□□□□ -1.35
HDAC3-216ENST00000523088 TBX5Q99593 518 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms