RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 CD40LGP29965 261 aa2.48□□□□□ -2.01
SMNDC1-205ENST00000477763 PRSS3P35030 304 aa2.48□□□□□ -2.01
SMNDC1-205ENST00000477763 EMP2P54851 167 aa2.48□□□□□ -2.01
SMNDC1-205ENST00000477763 ATP5J2P56134 94 aa2.48□□□□□ -2.01
SMNDC1-205ENST00000477763 CMC4P56277 68 aaPredicted RBP2.48□□□□□ -2.01
SMNDC1-205ENST00000477763 TSPAN5P62079 268 aa2.48□□□□□ -2.01
SMNDC1-205ENST00000477763 BTN1A1Q13410 526 aa2.48□□□□□ -2.01
SMNDC1-205ENST00000477763 MAD2L1BPQ15013 274 aaPredicted RBP2.48□□□□□ -2.01
SMNDC1-205ENST00000477763 RGS21Q2M5E4 152 aa2.48□□□□□ -2.01
SMNDC1-205ENST00000477763 KPRPQ5T749 579 aaPredicted RBP2.48□□□□□ -2.01
SMNDC1-205ENST00000477763 CASP12Q6UXS9 341 aa2.48□□□□□ -2.01
SMNDC1-205ENST00000477763 CYP4Z1Q86W10 505 aa2.48□□□□□ -2.01
SMNDC1-205ENST00000477763 LRRC6Q86X45 466 aa2.48□□□□□ -2.01
SMNDC1-205ENST00000477763 ORMDL3Q8N138 153 aa2.48□□□□□ -2.01
SMNDC1-205ENST00000477763 OR2Z1Q8NG97 314 aa2.48□□□□□ -2.01
SMNDC1-205ENST00000477763 OR4D6Q8NGJ1 314 aa2.48□□□□□ -2.01
SMNDC1-205ENST00000477763 BAALCQ8WXS3 180 aa2.48□□□□□ -2.01
SMNDC1-205ENST00000477763 ING5Q8WYH8 240 aa2.48□□□□□ -2.01
SMNDC1-205ENST00000477763 WDR34Q96EX3 536 aa2.48□□□□□ -2.01
SMNDC1-205ENST00000477763 CHMP6Q96FZ7 201 aa2.48□□□□□ -2.01
SMNDC1-205ENST00000477763 SMARCD1Q96GM5 515 aa2.48□□□□□ -2.01
SMNDC1-205ENST00000477763 RTBDNQ9BSG5 229 aaPredicted RBP2.48□□□□□ -2.01
SMNDC1-205ENST00000477763 MED10Q9BTT4 135 aa2.48□□□□□ -2.01
SMNDC1-205ENST00000477763 VCX3BQ9H321 246 aa2.48□□□□□ -2.01
SMNDC1-205ENST00000477763 KIR3DX1Q9H7L2 352 aa2.48□□□□□ -2.01
SMNDC1-205ENST00000477763 C6orf50Q9HD87 102 aa2.48□□□□□ -2.01
SMNDC1-205ENST00000477763 TAS2R5Q9NYW4 299 aa2.48□□□□□ -2.01
SMNDC1-205ENST00000477763 IL37Q9NZH6 218 aa2.48□□□□□ -2.01
SMNDC1-205ENST00000477763 HMGXB4Q9UGU5 601 aa2.48□□□□□ -2.01
SMNDC1-205ENST00000477763 WIF1Q9Y5W5 379 aa2.48□□□□□ -2.01
SMNDC1-205ENST00000477763 PUS1Q9Y606 427 aaKnown RBP eCLIP2.48□□□□□ -2.01
SMNDC1-205ENST00000477763 UNC13AQ9UPW8 1703 aa2.48□□□□□ -2.01
SMNDC1-205ENST00000477763 ZNF608Q9ULD9 1512 aaPredicted RBP2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 IGHV3OR16-8A0A075B7F1 116 aa2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 TRAV8-4A0A0B4J246 113 aa2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 IGHV2OR16-5A0A0B4J2B6 119 aa2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 PRAMEF26H0Y7S4 382 aa2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 H7C2Y5 167 aa2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 K7EM74 188 aa2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 RFXANKO14593 260 aa2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 OR7C2O60412 319 aa2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 P01737 135 aa2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 NTF3P20783 257 aa2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 BGNP21810 368 aa2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 IVDP26440 423 aa2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 SLC35B1P78383 322 aa2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 SLAMF1Q13291 335 aa2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 PMS2P3Q13401 168 aa2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 KDM4DQ6B0I6 523 aa2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 MED27Q6P2C8 311 aa2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 NELFCDQ8IXH7 590 aa2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 SYS1Q8N2H4 156 aa2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 SLC25A29Q8N8R3 303 aa2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 KLF14Q8TD94 323 aaPredicted RBP2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 TMEM239Q8WW34 195 aa2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 TMEM234Q8WY98 164 aa2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 GTF2H4Q92759 462 aa2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 CPB2Q96IY4 423 aa2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 ZNF514Q96K75 400 aaPredicted RBP2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 TSNAXQ99598 290 aaKnown RBP2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 GABRG3Q99928 467 aa2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 MAP1LC3CQ9BXW4 147 aa2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 SHCBP1LQ9BZQ2 653 aa2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 PLEKHF2Q9H8W4 249 aa2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 OR2S2Q9NQN1 319 aa2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 TMEM100Q9NV29 134 aa2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 STMN3Q9NZ72 180 aa2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 CFL2Q9Y281 166 aa2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 NPHP4O75161 1426 aaPredicted RBP2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 NISCHQ9Y2I1 1504 aa2.47□□□□□ -2.01
SMNDC1-205ENST00000477763 AQRO60306 1485 aaKnown RBP eCLIP2.46□□□□□ -2.02
SMNDC1-205ENST00000477763 ZCCHC6Q5VYS8 1495 aaKnown RBP2.46□□□□□ -2.02
SMNDC1-205ENST00000477763 A0A0A6YYH2 397 aa2.46□□□□□ -2.02
SMNDC1-205ENST00000477763 TRAV8-6A0A0B4J262 113 aa2.46□□□□□ -2.02
SMNDC1-205ENST00000477763 CCL15-CCL14A0A0B4J2E2 113 aa2.46□□□□□ -2.02
SMNDC1-205ENST00000477763 TMEM213A2RRL7 107 aa2.46□□□□□ -2.02
SMNDC1-205ENST00000477763 A6NJ64 397 aa2.46□□□□□ -2.02
SMNDC1-205ENST00000477763 TMEM210A6NLX4 147 aa2.46□□□□□ -2.02
SMNDC1-205ENST00000477763 TOR1AO14656 332 aa2.46□□□□□ -2.02
SMNDC1-205ENST00000477763 ATP5HO75947 161 aa2.46□□□□□ -2.02
SMNDC1-205ENST00000477763 MMP7P09237 267 aaPredicted RBP2.46□□□□□ -2.02
SMNDC1-205ENST00000477763 OCMP0CE72 109 aaPredicted RBP2.46□□□□□ -2.02
SMNDC1-205ENST00000477763 NELFEP18615 380 aaKnown RBP2.46□□□□□ -2.02
SMNDC1-205ENST00000477763 MPIP34949 423 aa2.46□□□□□ -2.02
SMNDC1-205ENST00000477763 IDH2P48735 452 aaKnown RBP2.46□□□□□ -2.02
SMNDC1-205ENST00000477763 TAS2R60P59551 318 aa2.46□□□□□ -2.02
SMNDC1-205ENST00000477763 FADDQ13158 208 aa2.46□□□□□ -2.02
SMNDC1-205ENST00000477763 ITGB3BPQ13352 177 aaPredicted RBP2.46□□□□□ -2.02
SMNDC1-205ENST00000477763 CCL15Q16663 113 aa2.46□□□□□ -2.02
SMNDC1-205ENST00000477763 ATP6V1FQ16864 119 aa2.46□□□□□ -2.02
SMNDC1-205ENST00000477763 SAPCD1Q5SSQ6 148 aa2.46□□□□□ -2.02
SMNDC1-205ENST00000477763 CPTPQ5TA50 214 aa2.46□□□□□ -2.02
SMNDC1-205ENST00000477763 HHATQ5VTY9 493 aa2.46□□□□□ -2.02
SMNDC1-205ENST00000477763 SPINT4Q6UDR6 99 aa2.46□□□□□ -2.02
SMNDC1-205ENST00000477763 PLEKHG7Q6ZR37 379 aa2.46□□□□□ -2.02
SMNDC1-205ENST00000477763 DCXRQ7Z4W1 244 aa2.46□□□□□ -2.02
SMNDC1-205ENST00000477763 STK40Q8N2I9 435 aa2.46□□□□□ -2.02
SMNDC1-205ENST00000477763 CYB561A3Q8NBI2 242 aa2.46□□□□□ -2.02
SMNDC1-205ENST00000477763 OR8J2Q8NGG1 315 aa2.46□□□□□ -2.02
SMNDC1-205ENST00000477763 ZFAND1Q8TCF1 268 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms