RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 CCSMST1Q4G0I0 132 aa3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 ZNF658BQ4V348 819 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 C9orf64Q5T6V5 341 aa3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 NOXRED1Q6NXP6 359 aa3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 TTC33Q6PID6 262 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 AGTRAPQ6RW13 159 aa3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 TBPL2Q6SJ96 375 aa3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 VTCN1Q7Z7D3 282 aa3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 CAMK2N1Q7Z7J9 78 aa3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 THOC6Q86W42 341 aaKnown RBP3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 CALHM3Q86XJ0 350 aa3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 TGIF2LYQ8IUE0 185 aa3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 CMTM1Q8IZ96 169 aa3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 TRIML2Q8N7C3 387 aa3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 FAM86B1Q8N7N1 296 aa3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 OR8J2Q8NGG1 315 aa3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 OR9G4Q8NGQ1 327 aa3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 OR6X1Q8NH79 312 aa3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 CLHC1Q8NHS4 586 aa3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 CAPSLQ8WWF8 208 aa3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 ING5Q8WYH8 240 aa3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 TMBIM1Q969X1 311 aa3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 TMEM159Q96B96 161 aa3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 RMND5BQ96G75 393 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 SMIM10Q96HG1 83 aa3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 FOPNLQ96NB1 174 aa3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 TSSK3Q96PN8 268 aa3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 OR4K3Q96R72 315 aa3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 UGT2B28Q9BY64 529 aa3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 YTHDF1Q9BYJ9 559 aaKnown RBP3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 RGCCQ9H4X1 137 aa3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 LYRM4Q9HD34 91 aa3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 CTPS2Q9NRF8 586 aa3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 PTTG3PQ9NZH4 202 aa3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 STOX2Q9P2F5 926 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 DEC1Q9P2X7 70 aa3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 VPS29Q9UBQ0 182 aa3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 SLC17A4Q9Y2C5 497 aa3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 FADS3Q9Y5Q0 445 aa3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 COMMD3-BMI1R4GMX3 469 aa3.37□□□□□ -1.87
HMGB3P18-201ENST00000406327 NUP205Q92621 2012 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 A0A087WXM4 84 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 ARPC4-TTLL3A0A0A6YYG9 625 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 A0A1W2PRD5 423 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 GABRR3A8MPY1 467 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 EVPLLA8MZ36 301 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 E7EQ34 232 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 G3V2T6 193 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 H3BSA7 217 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 RFXANKO14593 260 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 SCN2BO60939 215 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 NPIPB7O75200 414 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 POP7O75817 140 aaKnown RBP3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 MYO1DO94832 1006 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 SNAP29O95721 258 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 ACTL6AO96019 429 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 SOD1P00441 154 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 HLA-HP01893 362 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 ACSM4P0C7M7 580 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 ADRB3P13945 408 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 GPX2P18283 190 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 NELFEP18615 380 aaKnown RBP3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 IMPA1P29218 277 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 CDKN2CP42773 168 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 CAV2P51636 162 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 WNT4P56705 351 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 TRAM2Q15035 370 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 PYCR3Q53H96 274 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 TCEAL5Q5H9L2 206 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 SOHLH1Q5JUK2 328 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 FAM78AQ5JUQ0 283 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 CCNJQ5T5M9 372 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 MED27Q6P2C8 311 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 ZNF621Q6ZSS3 439 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 APRG1Q8IVJ8 170 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 C10orf111Q8N326 155 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 ZNF786Q8N393 782 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 RNF175Q8N4F7 328 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 C11orf42Q8N5U0 333 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 ZNF321PQ8N8H1 164 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 C20orf203Q8NBC4 194 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 OR2A1Q8NGT9 310 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 OR5B3Q8NH48 314 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 OR5K1Q8NHB7 308 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 OR5K2Q8NHB8 316 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 CYGBQ8WWM9 190 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 OR8D1Q8WZ84 308 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 RPUSD4Q96CM3 377 aaKnown RBP3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 WDR34Q96EX3 536 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 AURKBQ96GD4 344 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 PYURFQ96I23 114 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 ZNF514Q96K75 400 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 RDH12Q96NR8 316 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 OPALINQ96PE5 141 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 BCL7BQ9BQE9 202 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 TRIM4Q9C037 500 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 ACTR3CQ9C0K3 210 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 VCX3AQ9NNX9 186 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 MMP26Q9NRE1 261 aa3.36□□□□□ -1.87
HMGB3P18-201ENST00000406327 USE1Q9NZ43 259 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms